Re: Using scripts with large numbers of retained trees

[Santiago Catalano]

Hi Travis,

Copy these lines at the top of the script code and run it.

macro-;
macro [1000 ;
macro* 10 10000 ;

best,

Santiago


On 7/26/12, Travis Park <travispa...@gmail.com> wrote:
> Hi Guys
>
> I'm currently conducting research on fossil penguins from Australia and
> have produced a phylogeny using TNT with a best score (TBR) of 3130 and
> 2000 - 4000 trees retained (depending on number of additional replication
> sequences chosen).
>
> However, when I attempt to run either the wstats or stats scripts to obtain
>
> the CI and RI for the phylogeny it comes up with the following error
> messages:
>
> For wstats - "Error reading line 15 of
> C:\Users\Travis\Documents\Palaeontology\TnT\wstats.run
> t [ ( ntrees + 1 ) ] ^ + clist [ ( nc"
>
> For stats - "Error reading line 6 of
> C:\Users\Travis\Documents\Palaeontology\TnT\stats.run
> s [ ( ntrees + 1 ) ] ^ + RIs [ ( ntree"
>
> I've also noticed that in the TNT wiki at insectmuseum.org that someone has
>
> made a note that stats.run crashes when you have more than 400 trees in
> memory. Is there a way around this that I can implement?
>
> It's probably something straightforward that I'm missing, but I'm still
> relatively new to TnT!
>
> Any help would be greatly appreciated.
>
> Travis Park
>
> --
> Has recibido este mensaje porque estás suscrito al grupo "TNT-Tree Analysis
> using New Technology" de Grupos de Google.
> Para ver este debate en la Web, visita
> https://groups.google.com/d/msg/tnt-tree-analysis-using-new-technology/-/FCcZJRruqPAJ.
> Para publicar una entrada en este grupo, envía un correo electrónico a
> tnt-tree-analysis-u...@googlegroups.com.
> Para anular tu suscripción a este grupo, envía un correo electrónico a
> tnt-tree-analysis-using-n...@googlegroups.com
> Para tener acceso a más opciones, visita el grupo en
> http://groups.google.com/group/tnt-tree-analysis-using-new-technology?hl=es.
>
>


--
Dr. Santiago A. Catalano
INSUE - UNT
CONICET
SM Tucumán - Tucumán
Argentina

[Travis Park]

Hi Santiago

Thanks for your help! The changes you suggested have allowed stats.run to work now, although wstats.run still doesn't for some reason. However I can now obtain my indicies so thanks again!

Travis

> tnt-tree-analysis-using-new-techn...@googlegroups.com.

> Para anular tu suscripción a este grupo, envía un correo electrónico a

> tnt-tree-analysis-using-new-technology+unsubscribe@googlegroups.com