Consistency and Retention index with command line

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Denis

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May 10, 2011, 4:22:19 PM5/10/11
to TNT-Tree Analysis using New Technology
Hi,

I'm new to the group. I'm using TNT in command line mode on a Gnu/
Linux system to analyse morphological data.
I have a tree in which I fear there's quite much homoplasy,
considering what I see when I map the characters, so I wish to
calculate CI and RI for my strict consensus tree, how can I do this?

Regards,

-- Denis

Denis

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May 11, 2011, 3:13:47 AM5/11/11
to TNT-Tree Analysis using New Technology
I forgot to say that I already tried the script "stat.run". This
script in command line version displays something too big for the
screen that it ends with a line starting with the number 640 (although
I have 30 parcimonious trees only in memory, 42 characters x 30 taxa
in the matrix) with many times the same value repeated.

-- Denis

Denis a écrit :

Santiago Catalano

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May 12, 2011, 11:38:59 AM5/12/11
to tnt-tree-analysis-u...@googlegroups.com
Hi Dennis, 

If the problem is that you cannot see the full output, use the command "view". This allows you to travel along the output screen with the key arrows (up and down)
.

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--
Dr. Santiago A. Catalano
Fundación Miguel Lillo - INSUE 
CONICET
SM Tucumán - Tucumán
Argentina

Denis

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May 13, 2011, 3:03:09 AM5/13/11
to TNT-Tree Analysis using New Technology
Hi,

This is exaxtly what I needed, it solves many problems. Many thanks.

Denis
> >http://groups.google.com/group/tnt-tree-analysis-using-new-technology...
> > .
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