Bug report

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Theo Allnutt

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May 9, 2023, 9:18:32 PM5/9/23
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IQ-TREE multicore version 2.2.0 COVID-edition for Linux 64-bit built Jun  1 2022
Developed by Bui Quang Minh, James Barbetti, Nguyen Lam Tung,
Olga Chernomor, Heiko Schmidt, Dominik Schrempf, Michael Woodhams, Ly Trong Nhan.

Host:    gadi-login-02.gadi.nci.org.au (AVX512, FMA3, 250 GB RAM)
Command: iqtree2 --redo --quiet --seqtype DNA -S alignments/ --prefix MO_gene_ -m HKY+I+G
Seed:    681397 (Using SPRNG - Scalable Parallel Random Number Generator)
Time:    Wed May 10 11:05:00 2023
Kernel:  AVX+FMA - 1 threads (48 CPU cores detected)

....................................

Partition 7194_paralogs_1.1to1ortho.selected_stripped.aln.fasta / Model: HKY+F+I+G4 / df: 219 / LogL: -64.287
Partition 6995_paralogs_1.1to1ortho.selected_stripped.aln.fasta / Model: HKY+F+I+G4 / df: 213 / LogL: -57.972
Partition 6449_paralogs_1.1to1ortho.selected_stripped.aln.fasta / Model: HKY+F+I+G4 / df: 111 / LogL: -150.454
ERROR: modelfactory.cpp:1243: virtual double ModelFactory::optimizeParametersGammaInvar(int, bool, double, double): Assertion `fabs(tree->getCurScore() - bestLogl) < 1.0' failed.
ERROR: STACK TRACE FOR DEBUGGING:
ERROR:
ERROR: *** IQ-TREE CRASHES WITH SIGNAL ABORTED
ERROR: *** For bug report please send to developers:
ERROR: ***    Log file: MO_gene_.log
ERROR: ***    Alignment files (if possible)
alignments.zip
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