ERROR: Tree file does not start with an opening-bracket

[Sarah Mathews]

Hi Minh,

I've received the same error message about an opening bracket posted by Mark Miller and others. In this case it was early in step 2 of the analyses to find gCF and sCF (e.g., in the search started with 'iqtree -S ALN_DIR --prefix loci -nt 10') after the initial parsimony tree was created. I've attached the log and parstree files.

Cheers,

Sarah

[Minh Bui]

Hi Sarah,

This is actually a different issue, -nt AUTO does not work yet with the new -S option in the beta version 1.7. So pls specify the number of cores explicitly. We will fix this before the official release.

Cheers,

Minh

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<loci.log><loci.parstree>

[Sarah....@csiro.au]

Hi Minh, 

Thanks, I do remember reading that. I’ll set number of cores.

Cheers

Sarah

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