Hi,
I found the description of the ModelFinder results quite confusing. For example, the following one:
Another example is for model TIM2
that has the 6-digit code 010232
. Thus, TIM2{4.39,5.30,12.1}
means that A-C=A-T=4.39 (coded 1
), A-G=5.30 (coded 2
), C-T=12.1 (coded 3
) and C-G=G-T=1.0 (coded 0
). This is, in turn, equivalent to specifying GTR{4.39,5.30,4.39,1.0,12.1}
.
According to the 6-digit model code, A-C=A-T is coded 0, not C-G=G-T (which are coded 2). Therefore, I am totally confused what the values in the result correspond to.