I'm replying to you only, you can rely further. Inca can export to raw...takes forever, and maybe you should come see it try... It's not fast, and I've read these files with minimal success into imagej and Digital Micrograph.
I usually export EDX maps (spectrum images) as raw data from Inca, that I later import with DM and turn them into dm3 files (3D datacubes) for analysis. Dm3 files could later be exported to Hyperspy. Inca can also export individual spectra as emsa files, which might be open by Hyperspy directly. Alternatively, and since they can easily be opened by DM, dm3s could be used as an intermediate format before importing with Hyperspy.
I hope this helps.
Sergio
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