error:005

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li jinhui

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Dec 12, 2024, 1:15:11 AM12/12/24

to FUMA GWAS users

Hello,

I encountered an error with the job I submitted (Job ID: 565650, Job Title: IBD_UC_CPASSOC1). However, another job I submitted (Job ID: 565652, Job Title: DSCIC_CPASSOC1), which used the same processing methods, executed successfully.

Attached is a portion of the submitted data. It clearly shows SNPs with p-values < 5E-8, no missing values, and no scientific notation in the BP column. This issue has been troubling me for quite some time. I would greatly appreciate any suggestions or insights you could provide.

Looking forward to hearing back from you.

Tanya Phung

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Dec 15, 2024, 2:52:45 PM12/15/24

to FUMA GWAS users

Looking at one of the top SNPs:
Screenshot 2024-12-15 205000.png

The SNP bp is in GRCh38:

Screenshot 2024-12-15 205122.png

A similar issue has been answered here: https://groups.google.com/g/fuma-gwas-users/c/M292ZFB43kQ/m/BVJ9DKdaBQAJ

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