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cytoscape-helpdesk

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Welcome to the Cytoscape Helpdesk. This group is intended for discussions pertaining to the installation and operation of Cytoscape. If you are developing or maintaining your own Cytoscape app, then please consider the cytoscape-app-dev group. Questions about cytoscape.js should go to stackoverflow. Newbie questions are welcomed!


Quick Links



Installing Cytoscape


Using Cytoscape

  • Analysis

  • Import and Export

  • Tables

  • Visualization


Apps

  • stringApp

  • ClueGO

  • EnrichmentMap

  • jActiveModules

  • chemViz2

  • PhosphoPath

Cytoscape Automation

  • Commands

  • py2cytoscape

  • RCy3

General

  • Report a Bug

  • Cytoscape Websites





If you are new to posting, following the Posting Guidelines will help you get quicker and more useful responses.
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Nagasai Hemasree's profile photo
Nagasai Hemasree, Scooter Morris3
9/27/18
calculate similarity between list of compounds
I created a network with no edges. But I couldn't get any similarly. I will repeat the same with
unread,
app-chemviz2
calculate similarity between list of compounds
I created a network with no edges. But I couldn't get any similarly. I will repeat the same with
9/27/18
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rammoha...@gmail.com's profile photo
rammoha...@gmail.com, Scooter Morris4
8/9/18
Example input file for ChemViz2
Hi Ram, Unfortunately, no, there is no easy way that I know of without some scripting. It would
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app-chemviz2
Example input file for ChemViz2
Hi Ram, Unfortunately, no, there is no easy way that I know of without some scripting. It would
8/9/18
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