You should be able to let it drop onto the floor and coil around naturally. The height above the floor might have to be adjusted to get it coiling consistently. It might also need some sort of teflon or metal guide to drape over on the way to the floor to keep the filament weight from pulling on the output differently. There have been many references to this method relative to the other extruders produced over the last year that do not have winders. You can see examples by looking up other DIY extruders. I would get something to put on the floor that is clean, like butcher paper or such. After you have a pile, then you can hand wind it onto a spool.
I have the opposite problem. I got a KS EB1 and decided to make my own winder, as the one that came with it was not a good design. After I got it all together and started to extrude material, the EB1 motor was not strong enough to extrude more than a few inches at a time before stalling (at any temp and the best quality high flow ABS). So far, not a lot of help from the company in suggesting how it might be corrected. It was the worst KS experience I have had, and for a product that was "ready for production with a proven design". I am going to try changing gear ratios on the extruder to slow it down and give it 1.6x more torque. It was extruding faster than I needed anyway.