Taking long time to do ML search. Is everything OK?

[Anon Student]

Hi,

Trying to generate a tree using RAxML.

I have 1090 alignments in my phylip file, each 532 long.

Doing 1000 rapid bootstraps. It took about 3 days to run all the bootstraps.

RIght now it's on the fast ML search.

How do I know it's not hung up on something / a crashed command?

I tried running this before with 1000 bootstraps and it got stuck up on bootstrap ~75 for a whole day and didn't make progress so I stopped it, deleted the fiels, and restarted. This time it finished the bootstrapping but isn't doing the fast ML search.

Here is what I get when I cat RAxML_info.T1000 :

This is RAxML version 8.2.4 released by Alexandros Stamatakis on October 02 2015.

With greatly appreciated code contributions by:

Andre Aberer      (HITS)

Simon Berger      (HITS)

Alexey Kozlov     (HITS)

Kassian Kobert    (HITS)

David Dao         (KIT and HITS)

Nick Pattengale   (Sandia)

Wayne Pfeiffer    (SDSC)

Akifumi S. Tanabe (NRIFS)

Alignment has 457 distinct alignment patterns

Proportion of gaps and completely undetermined characters in this alignment: 41.16%

RAxML rapid bootstrapping and subsequent ML search

Using 1 distinct models/data partitions with joint branch length optimization

Executing 1000 rapid bootstrap inferences and thereafter a thorough ML search 

All free model parameters will be estimated by RAxML

GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter

GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units

Partition: 0

Alignment Patterns: 457

Name: No Name Provided

DataType: AA

Substitution Matrix: AUTO

Using fixed base frequencies

RAxML was called as follows:

/usr/bin/raxmlHPC-PTHREADS-AVX -T 25 -f a -m PROTGAMMAAUTO -p 1202 -x 1202 -# 1000 -s data.phy -n T1000 

Automatic protein model assignment algorithm using ML criterion:

Partition: 0 best-scoring AA model: JTT likelihood -299130.308952 with empirical base frequencies

Automatic protein model assignment algorithm using ML criterion:

Partition: 0 best-scoring AA model: JTT likelihood -299128.991353 with empirical base frequencies

Time for BS model parameter optimization 223.760704

Bootstrap[0]: Time 375.714043 seconds, bootstrap likelihood -297522.056050, best rearrangement setting 10

Bootstrap[1]: Time 71.753775 seconds, bootstrap likelihood -305028.484764, best rearrangement setting 5

Bootstrap[2]: Time 70.491060 seconds, bootstrap likelihood -271424.852655, best rearrangement setting 5

Bootstrap[3]: Time 132.060924 seconds, bootstrap likelihood -297014.621530, best rearrangement setting 10

Bootstrap[4]: Time 81.864340 seconds, bootstrap likelihood -293462.863770, best rearrangement setting 6

Bootstrap[5]: Time 156.361312 seconds, bootstrap likelihood -284801.541226, best rearrangement setting 13

Bootstrap[6]: Time 88.166025 seconds, bootstrap likelihood -308217.397017, best rearrangement setting 6

Bootstrap[7]: Time 100.810009 seconds, bootstrap likelihood -302930.627361, best rearrangement setting 7

Bootstrap[8]: Time 129.624837 seconds, bootstrap likelihood -275518.832474, best rearrangement setting 10

Bootstrap[9]: Time 72.312017 seconds, bootstrap likelihood -309446.070992, best rearrangement setting 5

Bootstrap[10]: Time 125.274564 seconds, bootstrap likelihood -291622.381286, best rearrangement setting 9

Bootstrap[11]: Time 83.826951 seconds, bootstrap likelihood -309463.775136, best rearrangement setting 6

Bootstrap[12]: Time 91.303433 seconds, bootstrap likelihood -298710.905248, best rearrangement setting 7

Bootstrap[13]: Time 71.130953 seconds, bootstrap likelihood -276941.909570, best rearrangement setting 5

Bootstrap[14]: Time 119.394941 seconds, bootstrap likelihood -301322.550160, best rearrangement setting 9

Bootstrap[15]: Time 96.043602 seconds, bootstrap likelihood -280876.639781, best rearrangement setting 7

Bootstrap[16]: Time 80.688002 seconds, bootstrap likelihood -303668.298637, best rearrangement setting 6

Bootstrap[17]: Time 101.178142 seconds, bootstrap likelihood -313523.693085, best rearrangement setting 7

Bootstrap[18]: Time 159.022743 seconds, bootstrap likelihood -278611.908166, best rearrangement setting 14

Bootstrap[19]: Time 182.169562 seconds, bootstrap likelihood -304297.323779, best rearrangement setting 15

Bootstrap[20]: Time 180.070631 seconds, bootstrap likelihood -295294.633767, best rearrangement setting 12

Bootstrap[21]: Time 134.814921 seconds, bootstrap likelihood -300349.048768, best rearrangement setting 10

Bootstrap[22]: Time 141.159713 seconds, bootstrap likelihood -290920.173102, best rearrangement setting 11

Bootstrap[23]: Time 99.686069 seconds, bootstrap likelihood -301373.657325, best rearrangement setting 7

Bootstrap[24]: Time 87.262973 seconds, bootstrap likelihood -335159.247701, best rearrangement setting 6

Bootstrap[25]: Time 71.196110 seconds, bootstrap likelihood -306091.266760, best rearrangement setting 5

Bootstrap[26]: Time 123.092183 seconds, bootstrap likelihood -311043.219165, best rearrangement setting 9

Bootstrap[27]: Time 69.395522 seconds, bootstrap likelihood -293530.457087, best rearrangement setting 5

Bootstrap[28]: Time 121.565615 seconds, bootstrap likelihood -294283.158487, best rearrangement setting 9

Bootstrap[29]: Time 69.631568 seconds, bootstrap likelihood -303664.792897, best rearrangement setting 5

Bootstrap[30]: Time 117.289165 seconds, bootstrap likelihood -291889.588505, best rearrangement setting 8

Bootstrap[31]: Time 140.197424 seconds, bootstrap likelihood -297844.179713, best rearrangement setting 10

Bootstrap[32]: Time 173.134804 seconds, bootstrap likelihood -306717.242138, best rearrangement setting 14

Bootstrap[33]: Time 152.548658 seconds, bootstrap likelihood -267843.228339, best rearrangement setting 14

Bootstrap[34]: Time 144.854183 seconds, bootstrap likelihood -297691.205800, best rearrangement setting 12

Bootstrap[35]: Time 86.524561 seconds, bootstrap likelihood -294940.256621, best rearrangement setting 6

Bootstrap[36]: Time 142.873140 seconds, bootstrap likelihood -308413.414232, best rearrangement setting 11

Bootstrap[37]: Time 66.949890 seconds, bootstrap likelihood -312218.120177, best rearrangement setting 5

Bootstrap[38]: Time 195.759646 seconds, bootstrap likelihood -316538.198092, best rearrangement setting 15

Bootstrap[39]: Time 86.803943 seconds, bootstrap likelihood -284776.378986, best rearrangement setting 6

Bootstrap[40]: Time 158.654661 seconds, bootstrap likelihood -289013.044859, best rearrangement setting 10

Bootstrap[41]: Time 104.804160 seconds, bootstrap likelihood -279794.644962, best rearrangement setting 8

Bootstrap[42]: Time 141.165839 seconds, bootstrap likelihood -298211.153828, best rearrangement setting 11

Bootstrap[43]: Time 164.831123 seconds, bootstrap likelihood -293284.092845, best rearrangement setting 15

Bootstrap[44]: Time 198.883302 seconds, bootstrap likelihood -304612.518246, best rearrangement setting 15

Bootstrap[45]: Time 200.475934 seconds, bootstrap likelihood -312876.699088, best rearrangement setting 15

Bootstrap[46]: Time 83.728311 seconds, bootstrap likelihood -299211.498665, best rearrangement setting 6

Bootstrap[47]: Time 159.780321 seconds, bootstrap likelihood -295601.606296, best rearrangement setting 14

Bootstrap[48]: Time 71.501265 seconds, bootstrap likelihood -320938.729866, best rearrangement setting 5

Bootstrap[49]: Time 136.244587 seconds, bootstrap likelihood -306018.358737, best rearrangement setting 11

Bootstrap[50]: Time 93.845633 seconds, bootstrap likelihood -285346.768732, best rearrangement setting 6

Bootstrap[51]: Time 136.979639 seconds, bootstrap likelihood -301564.718801, best rearrangement setting 10

Bootstrap[52]: Time 142.734262 seconds, bootstrap likelihood -306234.961833, best rearrangement setting 11

Bootstrap[53]: Time 131.369561 seconds, bootstrap likelihood -286305.128126, best rearrangement setting 10

Bootstrap[54]: Time 198.551012 seconds, bootstrap likelihood -299976.057406, best rearrangement setting 14

Bootstrap[55]: Time 95.443729 seconds, bootstrap likelihood -290062.478742, best rearrangement setting 7

Bootstrap[56]: Time 78.970530 seconds, bootstrap likelihood -299110.540120, best rearrangement setting 6

Bootstrap[57]: Time 135.898563 seconds, bootstrap likelihood -294934.082618, best rearrangement setting 11

Bootstrap[58]: Time 100.163354 seconds, bootstrap likelihood -285163.525901, best rearrangement setting 7

Bootstrap[59]: Time 125.474670 seconds, bootstrap likelihood -289801.010579, best rearrangement setting 10

Bootstrap[60]: Time 184.308171 seconds, bootstrap likelihood -298872.189335, best rearrangement setting 12

Bootstrap[61]: Time 156.552580 seconds, bootstrap likelihood -313312.390648, best rearrangement setting 11

Bootstrap[62]: Time 123.473538 seconds, bootstrap likelihood -279910.783799, best rearrangement setting 10

Bootstrap[63]: Time 149.649832 seconds, bootstrap likelihood -277428.840651, best rearrangement setting 12

Bootstrap[64]: Time 86.114004 seconds, bootstrap likelihood -308383.539720, best rearrangement setting 6

Bootstrap[65]: Time 98.096255 seconds, bootstrap likelihood -267912.732113, best rearrangement setting 7

Bootstrap[66]: Time 128.597296 seconds, bootstrap likelihood -300344.752685, best rearrangement setting 10

Bootstrap[67]: Time 145.729558 seconds, bootstrap likelihood -275256.623795, best rearrangement setting 12

Bootstrap[68]: Time 139.198108 seconds, bootstrap likelihood -289529.162261, best rearrangement setting 12

Bootstrap[69]: Time 107.396112 seconds, bootstrap likelihood -299981.358983, best rearrangement setting 8

Bootstrap[70]: Time 77.944348 seconds, bootstrap likelihood -303941.008923, best rearrangement setting 5

Bootstrap[71]: Time 87.581822 seconds, bootstrap likelihood -299565.181760, best rearrangement setting 6

Bootstrap[72]: Time 126.672379 seconds, bootstrap likelihood -280705.227257, best rearrangement setting 10

Bootstrap[73]: Time 142.201684 seconds, bootstrap likelihood -286651.197818, best rearrangement setting 12

Bootstrap[74]: Time 169.893854 seconds, bootstrap likelihood -304720.948632, best rearrangement setting 12

Bootstrap[75]: Time 124.993548 seconds, bootstrap likelihood -304612.273987, best rearrangement setting 9

Bootstrap[76]: Time 97.440019 seconds, bootstrap likelihood -326223.698682, best rearrangement setting 7

Bootstrap[77]: Time 173.629632 seconds, bootstrap likelihood -290385.179983, best rearrangement setting 15

Bootstrap[78]: Time 126.379468 seconds, bootstrap likelihood -299861.482009, best rearrangement setting 10

Bootstrap[79]: Time 98.041760 seconds, bootstrap likelihood -297303.372856, best rearrangement setting 7

Bootstrap[80]: Time 82.974743 seconds, bootstrap likelihood -308588.491833, best rearrangement setting 5

Bootstrap[81]: Time 226.061378 seconds, bootstrap likelihood -285811.682335, best rearrangement setting 15

Bootstrap[82]: Time 138.769016 seconds, bootstrap likelihood -323432.319732, best rearrangement setting 7

Bootstrap[83]: Time 71.814055 seconds, bootstrap likelihood -278449.715670, best rearrangement setting 5

Bootstrap[84]: Time 157.856872 seconds, bootstrap likelihood -319433.513576, best rearrangement setting 10

Bootstrap[85]: Time 141.370654 seconds, bootstrap likelihood -283839.163325, best rearrangement setting 8

Bootstrap[86]: Time 131.738714 seconds, bootstrap likelihood -287877.000388, best rearrangement setting 6

Bootstrap[87]: Time 207.025282 seconds, bootstrap likelihood -293144.718623, best rearrangement setting 10

Bootstrap[88]: Time 140.001957 seconds, bootstrap likelihood -322643.099223, best rearrangement setting 7

Bootstrap[89]: Time 151.177925 seconds, bootstrap likelihood -283092.183206, best rearrangement setting 10

Bootstrap[90]: Time 150.831499 seconds, bootstrap likelihood -275948.064306, best rearrangement setting 9

Bootstrap[91]: Time 424.236568 seconds, bootstrap likelihood -334193.487079, best rearrangement setting 15

Bootstrap[92]: Time 301.789861 seconds, bootstrap likelihood -299639.083216, best rearrangement setting 14

Bootstrap[93]: Time 112.358802 seconds, bootstrap likelihood -307365.537293, best rearrangement setting 6

Bootstrap[94]: Time 150.664148 seconds, bootstrap likelihood -303091.295975, best rearrangement setting 7

Bootstrap[95]: Time 197.236257 seconds, bootstrap likelihood -289544.005007, best rearrangement setting 12

Bootstrap[96]: Time 257.560668 seconds, bootstrap likelihood -307191.996749, best rearrangement setting 14

Bootstrap[97]: Time 94.195211 seconds, bootstrap likelihood -297727.827909, best rearrangement setting 6

Bootstrap[98]: Time 90.786960 seconds, bootstrap likelihood -295845.773804, best rearrangement setting 5

Bootstrap[99]: Time 195.064814 seconds, bootstrap likelihood -294602.198821, best rearrangement setting 9

Bootstrap[100]: Time 297.837952 seconds, bootstrap likelihood -300533.057557, best rearrangement setting 13

Bootstrap[101]: Time 239.366358 seconds, bootstrap likelihood -278172.827176, best rearrangement setting 13

Bootstrap[102]: Time 206.025176 seconds, bootstrap likelihood -304009.954815, best rearrangement setting 12

Bootstrap[103]: Time 148.630514 seconds, bootstrap likelihood -298559.890888, best rearrangement setting 8

Bootstrap[104]: Time 198.169505 seconds, bootstrap likelihood -286399.196946, best rearrangement setting 14

Bootstrap[105]: Time 202.292362 seconds, bootstrap likelihood -305382.762563, best rearrangement setting 14

Bootstrap[106]: Time 89.501373 seconds, bootstrap likelihood -298461.128237, best rearrangement setting 5

Bootstrap[107]: Time 188.406406 seconds, bootstrap likelihood -293498.127260, best rearrangement setting 11

Bootstrap[108]: Time 175.167959 seconds, bootstrap likelihood -301489.343860, best rearrangement setting 10

Bootstrap[109]: Time 187.357419 seconds, bootstrap likelihood -299797.500846, best rearrangement setting 9

Bootstrap[110]: Time 142.785884 seconds, bootstrap likelihood -286542.415026, best rearrangement setting 7

Bootstrap[111]: Time 247.617502 seconds, bootstrap likelihood -297433.401303, best rearrangement setting 14

Bootstrap[112]: Time 220.252178 seconds, bootstrap likelihood -282349.890678, best rearrangement setting 15

Bootstrap[113]: Time 134.532898 seconds, bootstrap likelihood -287190.591325, best rearrangement setting 9

Bootstrap[114]: Time 157.307387 seconds, bootstrap likelihood -303213.504273, best rearrangement setting 9

Bootstrap[115]: Time 156.603424 seconds, bootstrap likelihood -301538.333569, best rearrangement setting 8

Bootstrap[116]: Time 190.215152 seconds, bootstrap likelihood -294889.079177, best rearrangement setting 14

Bootstrap[117]: Time 114.195360 seconds, bootstrap likelihood -293061.606267, best rearrangement setting 7

Bootstrap[118]: Time 162.341797 seconds, bootstrap likelihood -283111.885690, best rearrangement setting 10

Bootstrap[119]: Time 190.700030 seconds, bootstrap likelihood -285349.500274, best rearrangement setting 13

Bootstrap[120]: Time 94.196890 seconds, bootstrap likelihood -298339.074690, best rearrangement setting 5

Bootstrap[121]: Time 149.431680 seconds, bootstrap likelihood -300392.358734, best rearrangement setting 10

Bootstrap[122]: Time 111.174733 seconds, bootstrap likelihood -293913.325766, best rearrangement setting 6

Bootstrap[123]: Time 99.724596 seconds, bootstrap likelihood -296227.589552, best rearrangement setting 6

Bootstrap[124]: Time 179.826464 seconds, bootstrap likelihood -281101.459566, best rearrangement setting 13

Bootstrap[125]: Time 105.174301 seconds, bootstrap likelihood -297368.837377, best rearrangement setting 6

Bootstrap[126]: Time 85.665653 seconds, bootstrap likelihood -299111.735757, best rearrangement setting 5

Bootstrap[127]: Time 125.764021 seconds, bootstrap likelihood -269337.211238, best rearrangement setting 7

Bootstrap[128]: Time 114.950803 seconds, bootstrap likelihood -288249.019155, best rearrangement setting 6

Bootstrap[129]: Time 190.440335 seconds, bootstrap likelihood -288039.340943, best rearrangement setting 13

Bootstrap[130]: Time 199.698411 seconds, bootstrap likelihood -289213.954664, best rearrangement setting 11

Bootstrap[131]: Time 201.340263 seconds, bootstrap likelihood -309743.906987, best rearrangement setting 13

Bootstrap[132]: Time 239.226006 seconds, bootstrap likelihood -309049.887372, best rearrangement setting 11

Bootstrap[133]: Time 233.729200 seconds, bootstrap likelihood -300761.806765, best rearrangement setting 12

Bootstrap[134]: Time 273.473157 seconds, bootstrap likelihood -291366.533326, best rearrangement setting 15

Bootstrap[135]: Time 98.964644 seconds, bootstrap likelihood -295692.157040, best rearrangement setting 5

Bootstrap[136]: Time 137.428313 seconds, bootstrap likelihood -291291.002770, best rearrangement setting 8

Bootstrap[137]: Time 144.600827 seconds, bootstrap likelihood -291545.212598, best rearrangement setting 9

Bootstrap[138]: Time 182.561540 seconds, bootstrap likelihood -294835.544828, best rearrangement setting 12

Bootstrap[139]: Time 227.042175 seconds, bootstrap likelihood -289934.679345, best rearrangement setting 13

Bootstrap[140]: Time 202.243170 seconds, bootstrap likelihood -299200.370609, best rearrangement setting 14

Bootstrap[141]: Time 198.349646 seconds, bootstrap likelihood -292003.151690, best rearrangement setting 13

Bootstrap[142]: Time 228.425449 seconds, bootstrap likelihood -297910.633972, best rearrangement setting 13

Bootstrap[143]: Time 180.004893 seconds, bootstrap likelihood -320162.576904, best rearrangement setting 9

Bootstrap[144]: Time 160.985726 seconds, bootstrap likelihood -315728.192975, best rearrangement setting 9

Bootstrap[145]: Time 144.106291 seconds, bootstrap likelihood -316734.601019, best rearrangement setting 8

Bootstrap[146]: Time 196.705651 seconds, bootstrap likelihood -300600.198317, best rearrangement setting 12

Bootstrap[147]: Time 151.510540 seconds, bootstrap likelihood -275763.228298, best rearrangement setting 10

Bootstrap[148]: Time 83.771804 seconds, bootstrap likelihood -294682.351547, best rearrangement setting 5

Bootstrap[149]: Time 179.816837 seconds, bootstrap likelihood -294851.635994, best rearrangement setting 11

Bootstrap[150]: Time 226.850953 seconds, bootstrap likelihood -294177.220963, best rearrangement setting 13

Bootstrap[151]: Time 210.998235 seconds, bootstrap likelihood -310153.153025, best rearrangement setting 13

Bootstrap[152]: Time 160.226887 seconds, bootstrap likelihood -298100.985306, best rearrangement setting 11

Bootstrap[153]: Time 128.103672 seconds, bootstrap likelihood -279548.913335, best rearrangement setting 8

Bootstrap[154]: Time 150.451468 seconds, bootstrap likelihood -300693.335313, best rearrangement setting 8

Bootstrap[155]: Time 276.241144 seconds, bootstrap likelihood -281057.221878, best rearrangement setting 15

Bootstrap[156]: Time 227.684669 seconds, bootstrap likelihood -273796.047492, best rearrangement setting 13

Bootstrap[157]: Time 247.139599 seconds, bootstrap likelihood -286163.583706, best rearrangement setting 14

Bootstrap[158]: Time 130.181189 seconds, bootstrap likelihood -299537.686019, best rearrangement setting 7

Bootstrap[159]: Time 164.246161 seconds, bootstrap likelihood -294751.872662, best rearrangement setting 10

Bootstrap[160]: Time 234.881496 seconds, bootstrap likelihood -306828.258195, best rearrangement setting 15

Bootstrap[161]: Time 175.902079 seconds, bootstrap likelihood -300272.773778, best rearrangement setting 10

Bootstrap[162]: Time 188.005237 seconds, bootstrap likelihood -302445.094803, best rearrangement setting 13

Bootstrap[163]: Time 166.417694 seconds, bootstrap likelihood -317509.687752, best rearrangement setting 11

Bootstrap[164]: Time 176.494720 seconds, bootstrap likelihood -307194.880121, best rearrangement setting 12

Bootstrap[165]: Time 194.991716 seconds, bootstrap likelihood -282351.357873, best rearrangement setting 12

Bootstrap[166]: Time 125.490063 seconds, bootstrap likelihood -308888.970415, best rearrangement setting 9

Bootstrap[167]: Time 164.608190 seconds, bootstrap likelihood -284183.121186, best rearrangement setting 12

Bootstrap[168]: Time 153.241188 seconds, bootstrap likelihood -300627.549652, best rearrangement setting 9

Bootstrap[169]: Time 114.238484 seconds, bootstrap likelihood -309065.133161, best rearrangement setting 7

Bootstrap[170]: Time 124.033926 seconds, bootstrap likelihood -310611.743702, best rearrangement setting 8

Bootstrap[171]: Time 154.455173 seconds, bootstrap likelihood -282158.925130, best rearrangement setting 9

Bootstrap[172]: Time 99.310432 seconds, bootstrap likelihood -307278.935247, best rearrangement setting 5

Bootstrap[173]: Time 138.286852 seconds, bootstrap likelihood -298332.109907, best rearrangement setting 8

Bootstrap[174]: Time 101.341314 seconds, bootstrap likelihood -308549.892542, best rearrangement setting 5

Bootstrap[175]: Time 137.885445 seconds, bootstrap likelihood -321436.461577, best rearrangement setting 8

Bootstrap[176]: Time 156.527821 seconds, bootstrap likelihood -286564.438105, best rearrangement setting 9

Bootstrap[177]: Time 287.238528 seconds, bootstrap likelihood -292396.311897, best rearrangement setting 15

Bootstrap[178]: Time 224.805524 seconds, bootstrap likelihood -287352.854783, best rearrangement setting 11

Bootstrap[179]: Time 268.898940 seconds, bootstrap likelihood -299811.233329, best rearrangement setting 13

Bootstrap[180]: Time 272.225201 seconds, bootstrap likelihood -318148.724543, best rearrangement setting 13

Bootstrap[181]: Time 88.758478 seconds, bootstrap likelihood -331683.463927, best rearrangement setting 5

Bootstrap[182]: Time 137.546121 seconds, bootstrap likelihood -285479.735171, best rearrangement setting 9

Bootstrap[183]: Time 187.706280 seconds, bootstrap likelihood -292661.647438, best rearrangement setting 11

Bootstrap[184]: Time 261.263558 seconds, bootstrap likelihood -304968.425913, best rearrangement setting 13

Bootstrap[185]: Time 255.075096 seconds, bootstrap likelihood -298353.505944, best rearrangement setting 15

Bootstrap[186]: Time 190.175055 seconds, bootstrap likelihood -278855.297363, best rearrangement setting 10

Bootstrap[187]: Time 114.238564 seconds, bootstrap likelihood -285767.049413, best rearrangement setting 7

Bootstrap[188]: Time 197.698146 seconds, bootstrap likelihood -275683.156095, best rearrangement setting 14

Bootstrap[189]: Time 213.946342 seconds, bootstrap likelihood -304328.653139, best rearrangement setting 15

Bootstrap[190]: Time 166.048608 seconds, bootstrap likelihood -289622.381408, best rearrangement setting 10

Bootstrap[191]: Time 174.585133 seconds, bootstrap likelihood -295524.086931, best rearrangement setting 13

Bootstrap[192]: Time 183.701675 seconds, bootstrap likelihood -294817.367803, best rearrangement setting 12

Bootstrap[193]: Time 176.575930 seconds, bootstrap likelihood -286607.717984, best rearrangement setting 12

Bootstrap[194]: Time 81.418746 seconds, bootstrap likelihood -305817.737375, best rearrangement setting 5

Bootstrap[195]: Time 139.769254 seconds, bootstrap likelihood -277325.417805, best rearrangement setting 9

Bootstrap[196]: Time 168.481553 seconds, bootstrap likelihood -309148.440554, best rearrangement setting 9

Bootstrap[197]: Time 143.005882 seconds, bootstrap likelihood -308313.301897, best rearrangement setting 7

Bootstrap[198]: Time 134.798583 seconds, bootstrap likelihood -286408.680034, best rearrangement setting 7

Bootstrap[199]: Time 245.719997 seconds, bootstrap likelihood -311042.678614, best rearrangement setting 12

Bootstrap[200]: Time 202.658971 seconds, bootstrap likelihood -295939.922549, best rearrangement setting 8

Bootstrap[201]: Time 183.323942 seconds, bootstrap likelihood -301134.909636, best rearrangement setting 9

Bootstrap[202]: Time 174.498100 seconds, bootstrap likelihood -294009.295102, best rearrangement setting 8

Bootstrap[203]: Time 248.993988 seconds, bootstrap likelihood -312539.918627, best rearrangement setting 15

Bootstrap[204]: Time 132.239027 seconds, bootstrap likelihood -295243.590383, best rearrangement setting 7

Bootstrap[205]: Time 209.218426 seconds, bootstrap likelihood -306166.988926, best rearrangement setting 14

Bootstrap[206]: Time 243.753909 seconds, bootstrap likelihood -304004.308954, best rearrangement setting 13

Bootstrap[207]: Time 180.467386 seconds, bootstrap likelihood -288094.413303, best rearrangement setting 10

Bootstrap[208]: Time 217.683942 seconds, bootstrap likelihood -283851.627504, best rearrangement setting 13

Bootstrap[209]: Time 252.870495 seconds, bootstrap likelihood -290702.422186, best rearrangement setting 15

Bootstrap[210]: Time 261.840558 seconds, bootstrap likelihood -303822.378826, best rearrangement setting 10

Bootstrap[211]: Time 191.227680 seconds, bootstrap likelihood -305937.382805, best rearrangement setting 9

Bootstrap[212]: Time 202.780859 seconds, bootstrap likelihood -311795.062489, best rearrangement setting 10

Bootstrap[213]: Time 114.806798 seconds, bootstrap likelihood -286026.625601, best rearrangement setting 6

Bootstrap[214]: Time 239.981914 seconds, bootstrap likelihood -307340.514474, best rearrangement setting 10

Bootstrap[215]: Time 132.597448 seconds, bootstrap likelihood -283632.906391, best rearrangement setting 6

Bootstrap[216]: Time 313.416156 seconds, bootstrap likelihood -288858.817877, best rearrangement setting 15

Bootstrap[217]: Time 210.345474 seconds, bootstrap likelihood -294083.365135, best rearrangement setting 9

Bootstrap[218]: Time 294.365645 seconds, bootstrap likelihood -282486.577150, best rearrangement setting 13

Bootstrap[219]: Time 120.484056 seconds, bootstrap likelihood -284789.741229, best rearrangement setting 6

Bootstrap[220]: Time 330.732989 seconds, bootstrap likelihood -317732.377285, best rearrangement setting 12

Bootstrap[221]: Time 160.636372 seconds, bootstrap likelihood -277433.266938, best rearrangement setting 6

Bootstrap[222]: Time 211.359759 seconds, bootstrap likelihood -285185.422432, best rearrangement setting 9

Bootstrap[223]: Time 176.750070 seconds, bootstrap likelihood -297732.629743, best rearrangement setting 8

Bootstrap[224]: Time 161.896813 seconds, bootstrap likelihood -302063.667483, best rearrangement setting 8

Bootstrap[225]: Time 121.169581 seconds, bootstrap likelihood -300322.615004, best rearrangement setting 6

Bootstrap[226]: Time 158.984812 seconds, bootstrap likelihood -291684.886371, best rearrangement setting 9

Bootstrap[227]: Time 121.154114 seconds, bootstrap likelihood -269562.040160, best rearrangement setting 7

Bootstrap[228]: Time 152.342565 seconds, bootstrap likelihood -301633.554775, best rearrangement setting 8

Bootstrap[229]: Time 118.121397 seconds, bootstrap likelihood -317153.689071, best rearrangement setting 5

Bootstrap[230]: Time 170.156975 seconds, bootstrap likelihood -317270.807661, best rearrangement setting 9

Bootstrap[231]: Time 223.369140 seconds, bootstrap likelihood -300333.522322, best rearrangement setting 12

Bootstrap[232]: Time 205.329141 seconds, bootstrap likelihood -281240.169866, best rearrangement setting 12

Bootstrap[233]: Time 281.699351 seconds, bootstrap likelihood -312113.494394, best rearrangement setting 15

Bootstrap[234]: Time 169.907239 seconds, bootstrap likelihood -275340.140495, best rearrangement setting 10

Bootstrap[235]: Time 103.760906 seconds, bootstrap likelihood -270388.158492, best rearrangement setting 5

Bootstrap[236]: Time 165.118743 seconds, bootstrap likelihood -287939.162796, best rearrangement setting 9

Bootstrap[237]: Time 120.100776 seconds, bootstrap likelihood -291172.774385, best rearrangement setting 6

Bootstrap[238]: Time 108.630737 seconds, bootstrap likelihood -291611.603891, best rearrangement setting 6

Bootstrap[239]: Time 254.382614 seconds, bootstrap likelihood -268646.719418, best rearrangement setting 14

Bootstrap[240]: Time 278.033728 seconds, bootstrap likelihood -295620.254983, best rearrangement setting 15

Bootstrap[241]: Time 411.073561 seconds, bootstrap likelihood -311735.538146, best rearrangement setting 15

Bootstrap[242]: Time 109.760511 seconds, bootstrap likelihood -283705.950520, best rearrangement setting 5

Bootstrap[243]: Time 228.924020 seconds, bootstrap likelihood -304095.859786, best rearrangement setting 14

Bootstrap[244]: Time 179.887603 seconds, bootstrap likelihood -297987.206767, best rearrangement setting 10

Bootstrap[245]: Time 170.392614 seconds, bootstrap likelihood -293169.793179, best rearrangement setting 12

Bootstrap[246]: Time 195.777829 seconds, bootstrap likelihood -289645.062653, best rearrangement setting 11

Bootstrap[247]: Time 262.318963 seconds, bootstrap likelihood -310083.060440, best rearrangement setting 13

Bootstrap[248]: Time 157.037980 seconds, bootstrap likelihood -294025.546604, best rearrangement setting 8

Bootstrap[249]: Time 299.446265 seconds, bootstrap likelihood -290460.206150, best rearrangement setting 14

Bootstrap[250]: Time 421.486836 seconds, bootstrap likelihood -306951.978325, best rearrangement setting 14

Bootstrap[251]: Time 354.904312 seconds, bootstrap likelihood -283507.359615, best rearrangement setting 14

Bootstrap[252]: Time 285.903005 seconds, bootstrap likelihood -278038.139732, best rearrangement setting 10

Bootstrap[253]: Time 153.440653 seconds, bootstrap likelihood -288524.814604, best rearrangement setting 7

Bootstrap[254]: Time 99.079388 seconds, bootstrap likelihood -295292.395771, best rearrangement setting 5

Bootstrap[255]: Time 169.677921 seconds, bootstrap likelihood -298233.592400, best rearrangement setting 12

Bootstrap[256]: Time 234.537412 seconds, bootstrap likelihood -301064.894790, best rearrangement setting 12

Bootstrap[257]: Time 163.360164 seconds, bootstrap likelihood -317415.591029, best rearrangement setting 8

Bootstrap[258]: Time 181.295206 seconds, bootstrap likelihood -295090.528164, best rearrangement setting 11

Bootstrap[259]: Time 229.803014 seconds, bootstrap likelihood -297226.696390, best rearrangement setting 14

Bootstrap[260]: Time 267.978384 seconds, bootstrap likelihood -307631.755475, best rearrangement setting 15

Bootstrap[261]: Time 103.662361 seconds, bootstrap likelihood -279123.420542, best rearrangement setting 5

Bootstrap[262]: Time 151.672963 seconds, bootstrap likelihood -303509.237956, best rearrangement setting 8

Bootstrap[263]: Time 173.930530 seconds, bootstrap likelihood -295299.492969, best rearrangement setting 10

Bootstrap[264]: Time 260.532203 seconds, bootstrap likelihood -298123.842932, best rearrangement setting 14

Bootstrap[265]: Time 142.429309 seconds, bootstrap likelihood -297974.711573, best rearrangement setting 7

Bootstrap[266]: Time 168.438420 seconds, bootstrap likelihood -281745.847472, best rearrangement setting 11

Bootstrap[267]: Time 223.784163 seconds, bootstrap likelihood -309916.436540, best rearrangement setting 10

Bootstrap[268]: Time 155.570997 seconds, bootstrap likelihood -312236.943554, best rearrangement setting 7

Bootstrap[269]: Time 240.094059 seconds, bootstrap likelihood -287717.624315, best rearrangement setting 15

Bootstrap[270]: Time 130.742966 seconds, bootstrap likelihood -295547.083115, best rearrangement setting 6

Bootstrap[271]: Time 150.912988 seconds, bootstrap likelihood -311101.751911, best rearrangement setting 9

Bootstrap[272]: Time 230.986111 seconds, bootstrap likelihood -295355.847603, best rearrangement setting 14

Bootstrap[273]: Time 188.496117 seconds, bootstrap likelihood -285068.414295, best rearrangement setting 11

Bootstrap[274]: Time 261.287454 seconds, bootstrap likelihood -290487.075146, best rearrangement setting 14

Bootstrap[275]: Time 224.171764 seconds, bootstrap likelihood -280993.978183, best rearrangement setting 11

Bootstrap[276]: Time 151.178268 seconds, bootstrap likelihood -294945.466673, best rearrangement setting 8

Bootstrap[277]: Time 233.919272 seconds, bootstrap likelihood -298918.717873, best rearrangement setting 12

Bootstrap[278]: Time 92.592764 seconds, bootstrap likelihood -315341.551698, best rearrangement setting 5

Bootstrap[279]: Time 223.383945 seconds, bootstrap likelihood -275365.333065, best rearrangement setting 12

Bootstrap[280]: Time 182.898812 seconds, bootstrap likelihood -305664.034382, best rearrangement setting 9

Bootstrap[281]: Time 234.232561 seconds, bootstrap likelihood -283313.049554, best rearrangement setting 12

Bootstrap[282]: Time 163.360312 seconds, bootstrap likelihood -280972.409331, best rearrangement setting 6

Bootstrap[283]: Time 282.080895 seconds, bootstrap likelihood -292325.059176, best rearrangement setting 14

Bootstrap[284]: Time 116.879468 seconds, bootstrap likelihood -289540.067506, best rearrangement setting 6

Bootstrap[285]: Time 97.451560 seconds, bootstrap likelihood -300070.546472, best rearrangement setting 5

Bootstrap[286]: Time 109.765704 seconds, bootstrap likelihood -285696.383999, best rearrangement setting 5

Bootstrap[287]: Time 169.208350 seconds, bootstrap likelihood -298336.810504, best rearrangement setting 10

Bootstrap[288]: Time 109.898762 seconds, bootstrap likelihood -270325.993085, best rearrangement setting 6

Bootstrap[289]: Time 119.840069 seconds, bootstrap likelihood -310337.530621, best rearrangement setting 6

Bootstrap[290]: Time 275.553742 seconds, bootstrap likelihood -286465.548849, best rearrangement setting 13

Bootstrap[291]: Time 255.586195 seconds, bootstrap likelihood -294461.622771, best rearrangement setting 12

Bootstrap[292]: Time 175.690950 seconds, bootstrap likelihood -295177.300703, best rearrangement setting 8

Bootstrap[293]: Time 202.711060 seconds, bootstrap likelihood -314283.214796, best rearrangement setting 7

Bootstrap[294]: Time 139.057539 seconds, bootstrap likelihood -291345.042448, best rearrangement setting 6

Bootstrap[295]: Time 269.355892 seconds, bootstrap likelihood -315717.515190, best rearrangement setting 15

Bootstrap[296]: Time 255.625211 seconds, bootstrap likelihood -291770.313540, best rearrangement setting 15

Bootstrap[297]: Time 168.665525 seconds, bootstrap likelihood -296152.014374, best rearrangement setting 9

Bootstrap[298]: Time 190.601424 seconds, bootstrap likelihood -300839.696861, best rearrangement setting 11

Bootstrap[299]: Time 146.611035 seconds, bootstrap likelihood -284770.739589, best rearrangement setting 7

Bootstrap[300]: Time 243.022373 seconds, bootstrap likelihood -291466.421639, best rearrangement setting 14

Bootstrap[301]: Time 167.245600 seconds, bootstrap likelihood -285775.787175, best rearrangement setting 9

Bootstrap[302]: Time 127.247863 seconds, bootstrap likelihood -291316.284582, best rearrangement setting 7

Bootstrap[303]: Time 157.636515 seconds, bootstrap likelihood -269640.801759, best rearrangement setting 8

Bootstrap[304]: Time 139.003479 seconds, bootstrap likelihood -283122.688342, best rearrangement setting 8

Bootstrap[305]: Time 254.834061 seconds, bootstrap likelihood -281951.034846, best rearrangement setting 14

Bootstrap[306]: Time 243.180922 seconds, bootstrap likelihood -280871.245800, best rearrangement setting 14

Bootstrap[307]: Time 181.841164 seconds, bootstrap likelihood -296728.571701, best rearrangement setting 9

Bootstrap[308]: Time 160.743820 seconds, bootstrap likelihood -305006.010879, best rearrangement setting 9

Bootstrap[309]: Time 81.955123 seconds, bootstrap likelihood -322198.102640, best rearrangement setting 5

Bootstrap[310]: Time 220.193213 seconds, bootstrap likelihood -302755.742284, best rearrangement setting 14

Bootstrap[311]: Time 143.024360 seconds, bootstrap likelihood -296717.822257, best rearrangement setting 9

Bootstrap[312]: Time 213.558736 seconds, bootstrap likelihood -285726.303024, best rearrangement setting 11

Bootstrap[313]: Time 139.631961 seconds, bootstrap likelihood -283789.440132, best rearrangement setting 7

Bootstrap[314]: Time 238.756753 seconds, bootstrap likelihood -288629.322257, best rearrangement setting 11

Bootstrap[315]: Time 180.291746 seconds, bootstrap likelihood -289181.429601, best rearrangement setting 9

Bootstrap[316]: Time 140.577603 seconds, bootstrap likelihood -302560.075864, best rearrangement setting 6

Bootstrap[317]: Time 419.723161 seconds, bootstrap likelihood -304387.890784, best rearrangement setting 13

Bootstrap[318]: Time 318.683922 seconds, bootstrap likelihood -308247.444601, best rearrangement setting 12

Bootstrap[319]: Time 185.004887 seconds, bootstrap likelihood -299563.738542, best rearrangement setting 9

Bootstrap[320]: Time 235.398911 seconds, bootstrap likelihood -288008.305326, best rearrangement setting 11

Bootstrap[321]: Time 188.505743 seconds, bootstrap likelihood -291724.619812, best rearrangement setting 11

Bootstrap[322]: Time 397.832421 seconds, bootstrap likelihood -312262.523841, best rearrangement setting 14

Bootstrap[323]: Time 293.099071 seconds, bootstrap likelihood -313205.175138, best rearrangement setting 13

Bootstrap[324]: Time 122.040586 seconds, bootstrap likelihood -282545.077220, best rearrangement setting 6

Bootstrap[325]: Time 262.850036 seconds, bootstrap likelihood -287674.263414, best rearrangement setting 11

Bootstrap[326]: Time 234.364656 seconds, bootstrap likelihood -278276.912999, best rearrangement setting 10

Bootstrap[327]: Time 115.634981 seconds, bootstrap likelihood -286402.374668, best rearrangement setting 5

Bootstrap[328]: Time 265.997049 seconds, bootstrap likelihood -280176.799159, best rearrangement setting 10

Bootstrap[329]: Time 140.084975 seconds, bootstrap likelihood -271813.590523, best rearrangement setting 6

Bootstrap[330]: Time 201.241783 seconds, bootstrap likelihood -284977.860276, best rearrangement setting 9

Bootstrap[331]: Time 148.480633 seconds, bootstrap likelihood -296610.312123, best rearrangement setting 8

Bootstrap[332]: Time 97.147177 seconds, bootstrap likelihood -300334.376669, best rearrangement setting 5

Bootstrap[333]: Time 193.329791 seconds, bootstrap likelihood -318890.112837, best rearrangement setting 10

Bootstrap[334]: Time 217.219844 seconds, bootstrap likelihood -284603.530980, best rearrangement setting 10

Bootstrap[335]: Time 296.740287 seconds, bootstrap likelihood -319014.936860, best rearrangement setting 15

Bootstrap[336]: Time 180.304746 seconds, bootstrap likelihood -303489.140731, best rearrangement setting 9

Bootstrap[337]: Time 392.340319 seconds, bootstrap likelihood -285861.976661, best rearrangement setting 13

Bootstrap[338]: Time 365.486736 seconds, bootstrap likelihood -304422.275080, best rearrangement setting 15

Bootstrap[339]: Time 1322.994316 seconds, bootstrap likelihood -292013.395315, best rearrangement setting 6

Bootstrap[340]: Time 230.319488 seconds, bootstrap likelihood -296030.248866, best rearrangement setting 12

Bootstrap[341]: Time 287.461901 seconds, bootstrap likelihood -287823.829453, best rearrangement setting 15

Bootstrap[342]: Time 188.390370 seconds, bootstrap likelihood -294515.142597, best rearrangement setting 9

Bootstrap[343]: Time 223.161827 seconds, bootstrap likelihood -320163.597553, best rearrangement setting 10

Bootstrap[344]: Time 228.764614 seconds, bootstrap likelihood -295267.470658, best rearrangement setting 13

Bootstrap[345]: Time 309.366856 seconds, bootstrap likelihood -297981.429099, best rearrangement setting 15

Bootstrap[346]: Time 432.765494 seconds, bootstrap likelihood -305672.788748, best rearrangement setting 15

Bootstrap[347]: Time 141.476754 seconds, bootstrap likelihood -315028.847580, best rearrangement setting 6

Bootstrap[348]: Time 269.110471 seconds, bootstrap likelihood -302497.834752, best rearrangement setting 11

Bootstrap[349]: Time 236.981135 seconds, bootstrap likelihood -295102.864266, best rearrangement setting 11

Bootstrap[350]: Time 335.756022 seconds, bootstrap likelihood -300940.980483, best rearrangement setting 15

Bootstrap[351]: Time 168.161742 seconds, bootstrap likelihood -291614.011838, best rearrangement setting 8

Bootstrap[352]: Time 193.151479 seconds, bootstrap likelihood -293372.190065, best rearrangement setting 11

Bootstrap[353]: Time 251.826627 seconds, bootstrap likelihood -310171.542405, best rearrangement setting 13

Bootstrap[354]: Time 199.163092 seconds, bootstrap likelihood -291833.625879, best rearrangement setting 10

Bootstrap[355]: Time 181.070301 seconds, bootstrap likelihood -290457.947916, best rearrangement setting 10

Bootstrap[356]: Time 211.157647 seconds, bootstrap likelihood -288554.970549, best rearrangement setting 11

Bootstrap[357]: Time 156.358659 seconds, bootstrap likelihood -296713.766913, best rearrangement setting 8

Bootstrap[358]: Time 264.741477 seconds, bootstrap likelihood -298602.345212, best rearrangement setting 13

Bootstrap[359]: Time 246.253915 seconds, bootstrap likelihood -298656.526290, best rearrangement setting 15

Bootstrap[360]: Time 350.695331 seconds, bootstrap likelihood -299172.359610, best rearrangement setting 12

Bootstrap[361]: Time 384.549259 seconds, bootstrap likelihood -306005.267149, best rearrangement setting 15

Bootstrap[362]: Time 160.433592 seconds, bootstrap likelihood -298799.954763, best rearrangement setting 10

Bootstrap[363]: Time 223.785569 seconds, bootstrap likelihood -283808.834431, best rearrangement setting 13

Bootstrap[364]: Time 122.731413 seconds, bootstrap likelihood -286837.422275, best rearrangement setting 7

Bootstrap[365]: Time 143.469672 seconds, bootstrap likelihood -311936.210484, best rearrangement setting 10

Bootstrap[366]: Time 232.285265 seconds, bootstrap likelihood -310620.650900, best rearrangement setting 12

Bootstrap[367]: Time 197.419266 seconds, bootstrap likelihood -286387.027519, best rearrangement setting 11

Bootstrap[368]: Time 128.429034 seconds, bootstrap likelihood -313184.334700, best rearrangement setting 6

Bootstrap[369]: Time 189.741228 seconds, bootstrap likelihood -297738.244146, best rearrangement setting 10

Bootstrap[370]: Time 193.977392 seconds, bootstrap likelihood -301152.930765, best rearrangement setting 9

Bootstrap[371]: Time 197.469452 seconds, bootstrap likelihood -322749.019976, best rearrangement setting 10

Bootstrap[372]: Time 282.946210 seconds, bootstrap likelihood -304246.265575, best rearrangement setting 14

Bootstrap[373]: Time 303.462088 seconds, bootstrap likelihood -309012.349291, best rearrangement setting 12

Bootstrap[374]: Time 364.633323 seconds, bootstrap likelihood -292002.603752, best rearrangement setting 15

Bootstrap[375]: Time 182.727950 seconds, bootstrap likelihood -293933.375456, best rearrangement setting 11

Bootstrap[376]: Time 192.502998 seconds, bootstrap likelihood -302982.280056, best rearrangement setting 10

Bootstrap[377]: Time 326.124021 seconds, bootstrap likelihood -287436.515752, best rearrangement setting 13

Bootstrap[378]: Time 173.447045 seconds, bootstrap likelihood -277743.167084, best rearrangement setting 7

Bootstrap[379]: Time 331.576163 seconds, bootstrap likelihood -281536.708067, best rearrangement setting 14

Bootstrap[380]: Time 202.039460 seconds, bootstrap likelihood -296010.964805, best rearrangement setting 8

Bootstrap[381]: Time 374.943072 seconds, bootstrap likelihood -299360.814769, best rearrangement setting 13

Bootstrap[382]: Time 226.271452 seconds, bootstrap likelihood -285061.045472, best rearrangement setting 10

Bootstrap[383]: Time 138.960658 seconds, bootstrap likelihood -301345.402560, best rearrangement setting 6

Bootstrap[384]: Time 183.913060 seconds, bootstrap likelihood -292972.117916, best rearrangement setting 9

Bootstrap[385]: Time 236.206514 seconds, bootstrap likelihood -298915.675447, best rearrangement setting 13

Bootstrap[386]: Time 271.098565 seconds, bootstrap likelihood -307684.245308, best rearrangement setting 13

Bootstrap[387]: Time 161.511778 seconds, bootstrap likelihood -301554.245139, best rearrangement setting 8

Bootstrap[388]: Time 291.361467 seconds, bootstrap likelihood -316599.346330, best rearrangement setting 12

Bootstrap[389]: Time 274.181356 seconds, bootstrap likelihood -288408.181374, best rearrangement setting 15

Bootstrap[390]: Time 126.675469 seconds, bootstrap likelihood -283431.350467, best rearrangement setting 5

Bootstrap[391]: Time 280.722700 seconds, bootstrap likelihood -298598.903593, best rearrangement setting 15

Bootstrap[392]: Time 229.599430 seconds, bootstrap likelihood -279432.102109, best rearrangement setting 10

Bootstrap[393]: Time 259.652797 seconds, bootstrap likelihood -301289.604599, best rearrangement setting 11

Bootstrap[394]: Time 262.371705 seconds, bootstrap likelihood -288428.333778, best rearrangement setting 14

Bootstrap[395]: Time 248.935366 seconds, bootstrap likelihood -306207.850255, best rearrangement setting 14

Bootstrap[396]: Time 228.980750 seconds, bootstrap likelihood -299356.297014, best rearrangement setting 11

Bootstrap[397]: Time 218.832524 seconds, bootstrap likelihood -287178.604028, best rearrangement setting 15

Bootstrap[398]: Time 161.603257 seconds, bootstrap likelihood -309281.004965, best rearrangement setting 8

Bootstrap[399]: Time 314.619133 seconds, bootstrap likelihood -308329.577539, best rearrangement setting 14

Bootstrap[400]: Time 285.536203 seconds, bootstrap likelihood -311943.509164, best rearrangement setting 15

Bootstrap[401]: Time 147.309233 seconds, bootstrap likelihood -293464.540020, best rearrangement setting 7

Bootstrap[402]: Time 123.523318 seconds, bootstrap likelihood -316161.351539, best rearrangement setting 7

Bootstrap[403]: Time 231.417604 seconds, bootstrap likelihood -295622.402619, best rearrangement setting 13

Bootstrap[404]: Time 251.305526 seconds, bootstrap likelihood -299225.130846, best rearrangement setting 15

Bootstrap[405]: Time 252.275060 seconds, bootstrap likelihood -304885.927888, best rearrangement setting 12

Bootstrap[406]: Time 158.944392 seconds, bootstrap likelihood -288754.132071, best rearrangement setting 8

Bootstrap[407]: Time 217.784349 seconds, bootstrap likelihood -292003.118397, best rearrangement setting 11

Bootstrap[408]: Time 299.176908 seconds, bootstrap likelihood -283644.427261, best rearrangement setting 15

Bootstrap[409]: Time 150.234034 seconds, bootstrap likelihood -308978.278334, best rearrangement setting 7

Bootstrap[410]: Time 234.671893 seconds, bootstrap likelihood -299735.377899, best rearrangement setting 11

Bootstrap[411]: Time 139.666797 seconds, bootstrap likelihood -280152.753480, best rearrangement setting 8

Bootstrap[412]: Time 212.842800 seconds, bootstrap likelihood -295386.218061, best rearrangement setting 12

Bootstrap[413]: Time 217.814679 seconds, bootstrap likelihood -297268.304650, best rearrangement setting 12

Bootstrap[414]: Time 230.747851 seconds, bootstrap likelihood -271505.138512, best rearrangement setting 10

Bootstrap[415]: Time 124.626178 seconds, bootstrap likelihood -285161.948019, best rearrangement setting 5

Bootstrap[416]: Time 303.766079 seconds, bootstrap likelihood -308150.785585, best rearrangement setting 14

Bootstrap[417]: Time 132.029054 seconds, bootstrap likelihood -294859.582410, best rearrangement setting 5

Bootstrap[418]: Time 169.430067 seconds, bootstrap likelihood -291743.042951, best rearrangement setting 9

Bootstrap[419]: Time 123.786352 seconds, bootstrap likelihood -303570.700313, best rearrangement setting 5

Bootstrap[420]: Time 328.891521 seconds, bootstrap likelihood -301828.235365, best rearrangement setting 14

Bootstrap[421]: Time 212.766222 seconds, bootstrap likelihood -293746.823153, best rearrangement setting 13

Bootstrap[422]: Time 270.905930 seconds, bootstrap likelihood -322124.695005, best rearrangement setting 14

Bootstrap[423]: Time 189.571235 seconds, bootstrap likelihood -273485.976029, best rearrangement setting 9

Bootstrap[424]: Time 166.845808 seconds, bootstrap likelihood -295474.327517, best rearrangement setting 8

Bootstrap[425]: Time 287.384200 seconds, bootstrap likelihood -290661.322441, best rearrangement setting 14

Bootstrap[426]: Time 167.226708 seconds, bootstrap likelihood -293876.290010, best rearrangement setting 6

Bootstrap[427]: Time 148.269564 seconds, bootstrap likelihood -288276.379199, best rearrangement setting 6

Bootstrap[428]: Time 292.557606 seconds, bootstrap likelihood -277439.978494, best rearrangement setting 13

Bootstrap[429]: Time 118.755808 seconds, bootstrap likelihood -303384.285407, best rearrangement setting 6

Bootstrap[430]: Time 213.452719 seconds, bootstrap likelihood -307286.233444, best rearrangement setting 9

Bootstrap[431]: Time 146.240275 seconds, bootstrap likelihood -288885.908075, best rearrangement setting 9

Bootstrap[432]: Time 127.648867 seconds, bootstrap likelihood -284235.841388, best rearrangement setting 6

Bootstrap[433]: Time 163.383725 seconds, bootstrap likelihood -280501.045710, best rearrangement setting 8

Bootstrap[434]: Time 294.728241 seconds, bootstrap likelihood -301797.778086, best rearrangement setting 14

Bootstrap[435]: Time 129.282122 seconds, bootstrap likelihood -298597.975900, best rearrangement setting 5

Bootstrap[436]: Time 363.620874 seconds, bootstrap likelihood -310000.980591, best rearrangement setting 15

Bootstrap[437]: Time 233.653066 seconds, bootstrap likelihood -297683.922903, best rearrangement setting 10

Bootstrap[438]: Time 265.126073 seconds, bootstrap likelihood -280313.974736, best rearrangement setting 14

Bootstrap[439]: Time 188.173190 seconds, bootstrap likelihood -320638.480290, best rearrangement setting 9

Bootstrap[440]: Time 464.843735 seconds, bootstrap likelihood -304551.720333, best rearrangement setting 15

Bootstrap[441]: Time 322.262442 seconds, bootstrap likelihood -285092.024189, best rearrangement setting 9

Bootstrap[442]: Time 210.566898 seconds, bootstrap likelihood -310376.487464, best rearrangement setting 8

Bootstrap[443]: Time 242.769894 seconds, bootstrap likelihood -314796.053805, best rearrangement setting 10

Bootstrap[444]: Time 266.001253 seconds, bootstrap likelihood -280057.694424, best rearrangement setting 12

Bootstrap[445]: Time 129.991760 seconds, bootstrap likelihood -306280.485900, best rearrangement setting 5

Bootstrap[446]: Time 290.650348 seconds, bootstrap likelihood -295420.414315, best rearrangement setting 13

Bootstrap[447]: Time 156.050204 seconds, bootstrap likelihood -314718.483935, best rearrangement setting 7

Bootstrap[448]: Time 197.911639 seconds, bootstrap likelihood -285779.019567, best rearrangement setting 9

Bootstrap[449]: Time 381.619645 seconds, bootstrap likelihood -322615.539500, best rearrangement setting 15

Bootstrap[450]: Time 318.672493 seconds, bootstrap likelihood -287391.525996, best rearrangement setting 14

Bootstrap[451]: Time 157.872076 seconds, bootstrap likelihood -286582.128559, best rearrangement setting 7

Bootstrap[452]: Time 187.303204 seconds, bootstrap likelihood -300102.981844, best rearrangement setting 8

Bootstrap[453]: Time 282.453869 seconds, bootstrap likelihood -283321.734497, best rearrangement setting 9

Bootstrap[454]: Time 267.618857 seconds, bootstrap likelihood -301665.955212, best rearrangement setting 9

Bootstrap[455]: Time 591.816573 seconds, bootstrap likelihood -295072.594366, best rearrangement setting 14

Bootstrap[456]: Time 201.046169 seconds, bootstrap likelihood -303205.113497, best rearrangement setting 8

Bootstrap[457]: Time 589.315291 seconds, bootstrap likelihood -280976.764539, best rearrangement setting 15

Bootstrap[458]: Time 347.991710 seconds, bootstrap likelihood -272740.926808, best rearrangement setting 13

Bootstrap[459]: Time 114.012715 seconds, bootstrap likelihood -264544.819903, best rearrangement setting 5

Bootstrap[460]: Time 402.963699 seconds, bootstrap likelihood -335716.606870, best rearrangement setting 15

Bootstrap[461]: Time 407.071960 seconds, bootstrap likelihood -317555.692023, best rearrangement setting 13

Bootstrap[462]: Time 278.969227 seconds, bootstrap likelihood -300281.636942, best rearrangement setting 9

Bootstrap[463]: Time 124.795569 seconds, bootstrap likelihood -294988.043007, best rearrangement setting 5

Bootstrap[464]: Time 242.102261 seconds, bootstrap likelihood -305343.956738, best rearrangement setting 8

Bootstrap[465]: Time 241.362521 seconds, bootstrap likelihood -305298.736080, best rearrangement setting 9

Bootstrap[466]: Time 317.556058 seconds, bootstrap likelihood -292275.481122, best rearrangement setting 11

Bootstrap[467]: Time 243.078869 seconds, bootstrap likelihood -284788.208222, best rearrangement setting 11

Bootstrap[468]: Time 217.004890 seconds, bootstrap likelihood -307689.302580, best rearrangement setting 9

Bootstrap[469]: Time 327.864385 seconds, bootstrap likelihood -305733.293691, best rearrangement setting 12

Bootstrap[470]: Time 413.989867 seconds, bootstrap likelihood -305058.057964, best rearrangement setting 12

Bootstrap[471]: Time 181.828637 seconds, bootstrap likelihood -301383.797633, best rearrangement setting 5

Bootstrap[472]: Time 401.893359 seconds, bootstrap likelihood -288083.950253, best rearrangement setting 15

Bootstrap[473]: Time 199.954688 seconds, bootstrap likelihood -303416.102102, best rearrangement setting 8

Bootstrap[474]: Time 303.428685 seconds, bootstrap likelihood -278780.718623, best rearrangement setting 11

Bootstrap[475]: Time 227.136743 seconds, bootstrap likelihood -293936.434053, best rearrangement setting 10

Bootstrap[476]: Time 362.146437 seconds, bootstrap likelihood -332475.652840, best rearrangement setting 15

Bootstrap[477]: Time 174.868097 seconds, bootstrap likelihood -304069.274913, best rearrangement setting 9

Bootstrap[478]: Time 257.179091 seconds, bootstrap likelihood -302867.970456, best rearrangement setting 12

Bootstrap[479]: Time 123.289498 seconds, bootstrap likelihood -281589.136329, best rearrangement setting 5

Bootstrap[480]: Time 138.272722 seconds, bootstrap likelihood -312428.351808, best rearrangement setting 5

Bootstrap[481]: Time 140.050286 seconds, bootstrap likelihood -311825.259158, best rearrangement setting 6

Bootstrap[482]: Time 203.489965 seconds, bootstrap likelihood -297827.950758, best rearrangement setting 7

Bootstrap[483]: Time 314.059363 seconds, bootstrap likelihood -291026.075233, best rearrangement setting 13

Bootstrap[484]: Time 384.298684 seconds, bootstrap likelihood -281044.912165, best rearrangement setting 14

Bootstrap[485]: Time 471.752482 seconds, bootstrap likelihood -314565.541707, best rearrangement setting 12

Bootstrap[486]: Time 307.672180 seconds, bootstrap likelihood -289843.133016, best rearrangement setting 12

Bootstrap[487]: Time 332.542348 seconds, bootstrap likelihood -299231.680214, best rearrangement setting 13

Bootstrap[488]: Time 194.961776 seconds, bootstrap likelihood -301033.004198, best rearrangement setting 7

Bootstrap[489]: Time 305.651386 seconds, bootstrap likelihood -267939.295408, best rearrangement setting 12

Bootstrap[490]: Time 381.167984 seconds, bootstrap likelihood -295287.991011, best rearrangement setting 12

Bootstrap[491]: Time 231.140034 seconds, bootstrap likelihood -289747.318679, best rearrangement setting 7

Bootstrap[492]: Time 224.211803 seconds, bootstrap likelihood -296124.196104, best rearrangement setting 8

Bootstrap[493]: Time 367.215151 seconds, bootstrap likelihood -279827.749307, best rearrangement setting 11

Bootstrap[494]: Time 390.952693 seconds, bootstrap likelihood -309179.105406, best rearrangement setting 12

Bootstrap[495]: Time 268.114237 seconds, bootstrap likelihood -281373.264747, best rearrangement setting 12

Bootstrap[496]: Time 302.093603 seconds, bootstrap likelihood -292326.512870, best rearrangement setting 14

Bootstrap[497]: Time 187.099852 seconds, bootstrap likelihood -314855.725474, best rearrangement setting 6

Bootstrap[498]: Time 269.331021 seconds, bootstrap likelihood -323690.233283, best rearrangement setting 9

Bootstrap[499]: Time 371.569694 seconds, bootstrap likelihood -292838.049879, best rearrangement setting 15

Bootstrap[500]: Time 251.457982 seconds, bootstrap likelihood -320461.196348, best rearrangement setting 7

Bootstrap[501]: Time 182.609021 seconds, bootstrap likelihood -280027.795493, best rearrangement setting 6

Bootstrap[502]: Time 259.169449 seconds, bootstrap likelihood -303446.573115, best rearrangement setting 9

Bootstrap[503]: Time 446.831877 seconds, bootstrap likelihood -304617.694301, best rearrangement setting 13

Bootstrap[504]: Time 335.239671 seconds, bootstrap likelihood -315780.706275, best rearrangement setting 15

Bootstrap[505]: Time 126.362472 seconds, bootstrap likelihood -314940.922290, best rearrangement setting 5

Bootstrap[506]: Time 123.651343 seconds, bootstrap likelihood -287002.686400, best rearrangement setting 6

Bootstrap[507]: Time 270.307287 seconds, bootstrap likelihood -267528.493236, best rearrangement setting 11

Bootstrap[508]: Time 339.297301 seconds, bootstrap likelihood -297741.337316, best rearrangement setting 12

Bootstrap[509]: Time 442.228520 seconds, bootstrap likelihood -322142.018868, best rearrangement setting 12

Bootstrap[510]: Time 179.893804 seconds, bootstrap likelihood -280261.008413, best rearrangement setting 8

Bootstrap[511]: Time 515.906537 seconds, bootstrap likelihood -310018.338452, best rearrangement setting 15

Bootstrap[512]: Time 360.735154 seconds, bootstrap likelihood -292564.706816, best rearrangement setting 11

Bootstrap[513]: Time 281.941686 seconds, bootstrap likelihood -290833.617978, best rearrangement setting 8

Bootstrap[514]: Time 125.619992 seconds, bootstrap likelihood -303038.088145, best rearrangement setting 5

Bootstrap[515]: Time 244.611441 seconds, bootstrap likelihood -295137.683705, best rearrangement setting 12

Bootstrap[516]: Time 340.539040 seconds, bootstrap likelihood -307783.288253, best rearrangement setting 15

Bootstrap[517]: Time 156.031943 seconds, bootstrap likelihood -279138.353487, best rearrangement setting 8

Bootstrap[518]: Time 337.847698 seconds, bootstrap likelihood -319332.784785, best rearrangement setting 15

Bootstrap[519]: Time 115.174904 seconds, bootstrap likelihood -274525.512908, best rearrangement setting 6

Bootstrap[520]: Time 242.841997 seconds, bootstrap likelihood -302913.384580, best rearrangement setting 9

Bootstrap[521]: Time 247.731603 seconds, bootstrap likelihood -298324.353354, best rearrangement setting 11

Bootstrap[522]: Time 153.657541 seconds, bootstrap likelihood -293363.522341, best rearrangement setting 8

Bootstrap[523]: Time 231.610718 seconds, bootstrap likelihood -304399.122661, best rearrangement setting 10

Bootstrap[524]: Time 163.510400 seconds, bootstrap likelihood -303238.708122, best rearrangement setting 7

Bootstrap[525]: Time 255.431376 seconds, bootstrap likelihood -287336.062946, best rearrangement setting 11

Bootstrap[526]: Time 168.932190 seconds, bootstrap likelihood -299919.280559, best rearrangement setting 7

Bootstrap[527]: Time 186.346460 seconds, bootstrap likelihood -302703.595667, best rearrangement setting 8

Bootstrap[528]: Time 377.329603 seconds, bootstrap likelihood -294233.321276, best rearrangement setting 15

Bootstrap[529]: Time 147.355260 seconds, bootstrap likelihood -288850.341792, best rearrangement setting 6

Bootstrap[530]: Time 293.313350 seconds, bootstrap likelihood -305196.787456, best rearrangement setting 11

Bootstrap[531]: Time 199.038268 seconds, bootstrap likelihood -286913.728108, best rearrangement setting 10

Bootstrap[532]: Time 153.595462 seconds, bootstrap likelihood -273369.686535, best rearrangement setting 7

Bootstrap[533]: Time 302.880922 seconds, bootstrap likelihood -299646.397300, best rearrangement setting 13

Bootstrap[534]: Time 231.634318 seconds, bootstrap likelihood -295966.268483, best rearrangement setting 9

Bootstrap[535]: Time 468.509906 seconds, bootstrap likelihood -297714.041987, best rearrangement setting 15

Bootstrap[536]: Time 241.544527 seconds, bootstrap likelihood -283165.898501, best rearrangement setting 11

Bootstrap[537]: Time 132.808199 seconds, bootstrap likelihood -295729.813275, best rearrangement setting 5

Bootstrap[538]: Time 238.956695 seconds, bootstrap likelihood -297049.450181, best rearrangement setting 9

Bootstrap[539]: Time 340.861936 seconds, bootstrap likelihood -308818.937352, best rearrangement setting 15

Bootstrap[540]: Time 348.480924 seconds, bootstrap likelihood -283419.089113, best rearrangement setting 14

Bootstrap[541]: Time 360.668608 seconds, bootstrap likelihood -308048.173838, best rearrangement setting 14

Bootstrap[542]: Time 233.311441 seconds, bootstrap likelihood -308247.005323, best rearrangement setting 10

Bootstrap[543]: Time 366.649280 seconds, bootstrap likelihood -282263.208650, best rearrangement setting 11

Bootstrap[544]: Time 253.841414 seconds, bootstrap likelihood -302250.626394, best rearrangement setting 8

Bootstrap[545]: Time 199.906867 seconds, bootstrap likelihood -297463.882280, best rearrangement setting 7

Bootstrap[546]: Time 269.285676 seconds, bootstrap likelihood -317485.198795, best rearrangement setting 11

Bootstrap[547]: Time 146.684843 seconds, bootstrap likelihood -304000.643643, best rearrangement setting 6

Bootstrap[548]: Time 212.284383 seconds, bootstrap likelihood -305277.929321, best rearrangement setting 10

Bootstrap[549]: Time 184.639011 seconds, bootstrap likelihood -318304.147068, best rearrangement setting 8

Bootstrap[550]: Time 289.071023 seconds, bootstrap likelihood -295949.939758, best rearrangement setting 10

Bootstrap[551]: Time 322.354627 seconds, bootstrap likelihood -277451.119112, best rearrangement setting 13

Bootstrap[552]: Time 371.789116 seconds, bootstrap likelihood -274531.131383, best rearrangement setting 14

Bootstrap[553]: Time 514.161895 seconds, bootstrap likelihood -295275.614229, best rearrangement setting 13

Bootstrap[554]: Time 329.658499 seconds, bootstrap likelihood -279439.301764, best rearrangement setting 15

Bootstrap[555]: Time 281.914145 seconds, bootstrap likelihood -289185.995300, best rearrangement setting 12

Bootstrap[556]: Time 580.694974 seconds, bootstrap likelihood -299925.510605, best rearrangement setting 15

Bootstrap[557]: Time 246.170876 seconds, bootstrap likelihood -263193.835995, best rearrangement setting 11

Bootstrap[558]: Time 213.434526 seconds, bootstrap likelihood -312383.135834, best rearrangement setting 9

Bootstrap[559]: Time 192.074480 seconds, bootstrap likelihood -284775.575077, best rearrangement setting 7

Bootstrap[560]: Time 169.864178 seconds, bootstrap likelihood -295526.051230, best rearrangement setting 6

Bootstrap[561]: Time 256.580777 seconds, bootstrap likelihood -299064.453977, best rearrangement setting 9

Bootstrap[562]: Time 170.473969 seconds, bootstrap likelihood -298161.499086, best rearrangement setting 7

Bootstrap[563]: Time 174.049475 seconds, bootstrap likelihood -304869.833620, best rearrangement setting 6

Bootstrap[564]: Time 373.374805 seconds, bootstrap likelihood -274886.443270, best rearrangement setting 13

Bootstrap[565]: Time 251.503399 seconds, bootstrap likelihood -277206.885401, best rearrangement setting 10

Bootstrap[566]: Time 259.723555 seconds, bootstrap likelihood -290482.970870, best rearrangement setting 9

Bootstrap[567]: Time 616.283719 seconds, bootstrap likelihood -312663.931619, best rearrangement setting 15

Bootstrap[568]: Time 211.313128 seconds, bootstrap likelihood -294319.788683, best rearrangement setting 7

Bootstrap[569]: Time 328.926953 seconds, bootstrap likelihood -303324.179206, best rearrangement setting 11

Bootstrap[570]: Time 192.431029 seconds, bootstrap likelihood -300440.974894, best rearrangement setting 8

Bootstrap[571]: Time 190.211950 seconds, bootstrap likelihood -276917.989209, best rearrangement setting 7

Bootstrap[572]: Time 453.585724 seconds, bootstrap likelihood -292978.602894, best rearrangement setting 15

Bootstrap[573]: Time 403.287670 seconds, bootstrap likelihood -294089.723073, best rearrangement setting 13

Bootstrap[574]: Time 249.852720 seconds, bootstrap likelihood -299556.695573, best rearrangement setting 10

Bootstrap[575]: Time 339.292670 seconds, bootstrap likelihood -311693.965301, best rearrangement setting 13

Bootstrap[576]: Time 220.946957 seconds, bootstrap likelihood -313005.431738, best rearrangement setting 7

Bootstrap[577]: Time 596.602792 seconds, bootstrap likelihood -310140.220822, best rearrangement setting 14

Bootstrap[578]: Time 511.156804 seconds, bootstrap likelihood -306140.687543, best rearrangement setting 14

Bootstrap[579]: Time 249.060573 seconds, bootstrap likelihood -305700.820865, best rearrangement setting 8

Bootstrap[580]: Time 200.703794 seconds, bootstrap likelihood -292342.841569, best rearrangement setting 7

Bootstrap[581]: Time 359.962567 seconds, bootstrap likelihood -294584.842215, best rearrangement setting 14

Bootstrap[582]: Time 451.492301 seconds, bootstrap likelihood -288881.079676, best rearrangement setting 15

Bootstrap[583]: Time 196.537152 seconds, bootstrap likelihood -303642.489748, best rearrangement setting 10

Bootstrap[584]: Time 147.651182 seconds, bootstrap likelihood -307861.445347, best rearrangement setting 7

Bootstrap[585]: Time 304.190011 seconds, bootstrap likelihood -290475.808430, best rearrangement setting 14

Bootstrap[586]: Time 181.352291 seconds, bootstrap likelihood -291229.100052, best rearrangement setting 8

Bootstrap[587]: Time 270.620125 seconds, bootstrap likelihood -289724.645522, best rearrangement setting 13

Bootstrap[588]: Time 239.913233 seconds, bootstrap likelihood -299911.582191, best rearrangement setting 9

Bootstrap[589]: Time 354.933107 seconds, bootstrap likelihood -288600.380970, best rearrangement setting 13

Bootstrap[590]: Time 206.917894 seconds, bootstrap likelihood -311036.460906, best rearrangement setting 9

Bootstrap[591]: Time 215.099252 seconds, bootstrap likelihood -303336.703032, best rearrangement setting 10

Bootstrap[592]: Time 357.061514 seconds, bootstrap likelihood -293090.421675, best rearrangement setting 12

Bootstrap[593]: Time 386.365983 seconds, bootstrap likelihood -292177.797419, best rearrangement setting 15

Bootstrap[594]: Time 191.907272 seconds, bootstrap likelihood -308810.181254, best rearrangement setting 7

Bootstrap[595]: Time 253.026274 seconds, bootstrap likelihood -302121.402159, best rearrangement setting 10

Bootstrap[596]: Time 328.563024 seconds, bootstrap likelihood -295500.788166, best rearrangement setting 13

Bootstrap[597]: Time 263.770060 seconds, bootstrap likelihood -325748.912954, best rearrangement setting 11

Bootstrap[598]: Time 173.652643 seconds, bootstrap likelihood -317109.023510, best rearrangement setting 7

Bootstrap[599]: Time 277.003768 seconds, bootstrap likelihood -287742.035923, best rearrangement setting 9

Bootstrap[600]: Time 370.163040 seconds, bootstrap likelihood -283557.619651, best rearrangement setting 13

Bootstrap[601]: Time 273.893194 seconds, bootstrap likelihood -299829.519629, best rearrangement setting 9

Bootstrap[602]: Time 256.627752 seconds, bootstrap likelihood -283112.863236, best rearrangement setting 11

Bootstrap[603]: Time 401.957801 seconds, bootstrap likelihood -303702.900879, best rearrangement setting 14

Bootstrap[604]: Time 177.371079 seconds, bootstrap likelihood -320658.460353, best rearrangement setting 5

Bootstrap[605]: Time 494.613965 seconds, bootstrap likelihood -307204.813267, best rearrangement setting 14

Bootstrap[606]: Time 184.603120 seconds, bootstrap likelihood -294395.443970, best rearrangement setting 7

Bootstrap[607]: Time 138.145903 seconds, bootstrap likelihood -289092.345170, best rearrangement setting 6

Bootstrap[608]: Time 382.186412 seconds, bootstrap likelihood -298293.629764, best rearrangement setting 15

Bootstrap[609]: Time 191.716595 seconds, bootstrap likelihood -288264.180410, best rearrangement setting 8

Bootstrap[610]: Time 277.718050 seconds, bootstrap likelihood -299891.375286, best rearrangement setting 8

Bootstrap[611]: Time 292.280196 seconds, bootstrap likelihood -295436.135719, best rearrangement setting 12

Bootstrap[612]: Time 223.139250 seconds, bootstrap likelihood -301256.592526, best rearrangement setting 10

Bootstrap[613]: Time 138.256900 seconds, bootstrap likelihood -299890.924471, best rearrangement setting 5

Bootstrap[614]: Time 325.247004 seconds, bootstrap likelihood -309619.076920, best rearrangement setting 13

Bootstrap[615]: Time 312.883087 seconds, bootstrap likelihood -306727.973312, best rearrangement setting 13

Bootstrap[616]: Time 257.538534 seconds, bootstrap likelihood -289525.082815, best rearrangement setting 12

Bootstrap[617]: Time 190.644892 seconds, bootstrap likelihood -305279.579231, best rearrangement setting 9

Bootstrap[618]: Time 312.137074 seconds, bootstrap likelihood -282026.606449, best rearrangement setting 15

Bootstrap[619]: Time 140.948198 seconds, bootstrap likelihood -296582.547250, best rearrangement setting 6

Bootstrap[620]: Time 312.981657 seconds, bootstrap likelihood -284491.260413, best rearrangement setting 14

Bootstrap[621]: Time 238.823495 seconds, bootstrap likelihood -289459.966605, best rearrangement setting 10

Bootstrap[622]: Time 539.598803 seconds, bootstrap likelihood -307667.988420, best rearrangement setting 15

Bootstrap[623]: Time 333.398488 seconds, bootstrap likelihood -305374.413610, best rearrangement setting 13

Bootstrap[624]: Time 241.226764 seconds, bootstrap likelihood -310621.541141, best rearrangement setting 10

Bootstrap[625]: Time 396.922111 seconds, bootstrap likelihood -288232.129399, best rearrangement setting 15

Bootstrap[626]: Time 277.779540 seconds, bootstrap likelihood -290050.020925, best rearrangement setting 12

Bootstrap[627]: Time 230.700650 seconds, bootstrap likelihood -278852.724274, best rearrangement setting 11

Bootstrap[628]: Time 334.611746 seconds, bootstrap likelihood -294671.368018, best rearrangement setting 15

Bootstrap[629]: Time 144.929140 seconds, bootstrap likelihood -299122.055040, best rearrangement setting 7

Bootstrap[630]: Time 312.179324 seconds, bootstrap likelihood -276855.165249, best rearrangement setting 13

Bootstrap[631]: Time 319.118697 seconds, bootstrap likelihood -288525.245857, best rearrangement setting 14

Bootstrap[632]: Time 369.357306 seconds, bootstrap likelihood -317211.404576, best rearrangement setting 14

Bootstrap[633]: Time 393.319878 seconds, bootstrap likelihood -289590.044168, best rearrangement setting 15

Bootstrap[634]: Time 186.834087 seconds, bootstrap likelihood -310184.142196, best rearrangement setting 8

Bootstrap[635]: Time 263.599371 seconds, bootstrap likelihood -295004.375851, best rearrangement setting 11

Bootstrap[636]: Time 300.035428 seconds, bootstrap likelihood -279530.272367, best rearrangement setting 14

Bootstrap[637]: Time 174.618438 seconds, bootstrap likelihood -315159.253785, best rearrangement setting 7

Bootstrap[638]: Time 179.872139 seconds, bootstrap likelihood -299665.368030, best rearrangement setting 8

Bootstrap[639]: Time 352.064252 seconds, bootstrap likelihood -308662.110060, best rearrangement setting 14

Bootstrap[640]: Time 241.113275 seconds, bootstrap likelihood -286865.219177, best rearrangement setting 10

Bootstrap[641]: Time 360.007947 seconds, bootstrap likelihood -292946.932774, best rearrangement setting 14

Bootstrap[642]: Time 153.572394 seconds, bootstrap likelihood -281528.144890, best rearrangement setting 6

Bootstrap[643]: Time 307.226086 seconds, bootstrap likelihood -295067.380475, best rearrangement setting 11

Bootstrap[644]: Time 137.076539 seconds, bootstrap likelihood -296293.610984, best rearrangement setting 5

Bootstrap[645]: Time 196.613528 seconds, bootstrap likelihood -312430.738729, best rearrangement setting 7

Bootstrap[646]: Time 408.763854 seconds, bootstrap likelihood -300174.238870, best rearrangement setting 14

Bootstrap[647]: Time 305.981880 seconds, bootstrap likelihood -299882.166785, best rearrangement setting 11

Bootstrap[648]: Time 131.895738 seconds, bootstrap likelihood -301641.501839, best rearrangement setting 5

Bootstrap[649]: Time 179.299185 seconds, bootstrap likelihood -290338.239449, best rearrangement setting 7

Bootstrap[650]: Time 393.411235 seconds, bootstrap likelihood -320228.538917, best rearrangement setting 14

Bootstrap[651]: Time 337.372403 seconds, bootstrap likelihood -301949.107076, best rearrangement setting 13

Bootstrap[652]: Time 258.656991 seconds, bootstrap likelihood -305001.040665, best rearrangement setting 10

Bootstrap[653]: Time 477.780194 seconds, bootstrap likelihood -293785.157253, best rearrangement setting 15

Bootstrap[654]: Time 245.395838 seconds, bootstrap likelihood -286871.630011, best rearrangement setting 11

Bootstrap[655]: Time 196.004323 seconds, bootstrap likelihood -283112.501644, best rearrangement setting 9

Bootstrap[656]: Time 144.502890 seconds, bootstrap likelihood -313517.740622, best rearrangement setting 6

Bootstrap[657]: Time 222.179282 seconds, bootstrap likelihood -264138.652543, best rearrangement setting 11

Bootstrap[658]: Time 311.047043 seconds, bootstrap likelihood -286924.146767, best rearrangement setting 13

Bootstrap[659]: Time 284.222970 seconds, bootstrap likelihood -296479.265932, best rearrangement setting 10

Bootstrap[660]: Time 232.904038 seconds, bootstrap likelihood -291542.523220, best rearrangement setting 9

Bootstrap[661]: Time 354.132532 seconds, bootstrap likelihood -302748.430378, best rearrangement setting 14

Bootstrap[662]: Time 532.390237 seconds, bootstrap likelihood -320759.128241, best rearrangement setting 15

Bootstrap[663]: Time 203.507207 seconds, bootstrap likelihood -290404.815195, best rearrangement setting 9

Bootstrap[664]: Time 216.576574 seconds, bootstrap likelihood -272824.801779, best rearrangement setting 10

Bootstrap[665]: Time 137.311228 seconds, bootstrap likelihood -286389.389635, best rearrangement setting 6

Bootstrap[666]: Time 225.591018 seconds, bootstrap likelihood -320954.864104, best rearrangement setting 10

Bootstrap[667]: Time 198.426770 seconds, bootstrap likelihood -296319.697558, best rearrangement setting 8

Bootstrap[668]: Time 406.195605 seconds, bootstrap likelihood -276893.796693, best rearrangement setting 15

Bootstrap[669]: Time 234.543430 seconds, bootstrap likelihood -286055.058279, best rearrangement setting 10

Bootstrap[670]: Time 381.897409 seconds, bootstrap likelihood -301471.824348, best rearrangement setting 14

Bootstrap[671]: Time 330.897515 seconds, bootstrap likelihood -281885.333172, best rearrangement setting 14

Bootstrap[672]: Time 446.025022 seconds, bootstrap likelihood -299078.774859, best rearrangement setting 15

Bootstrap[673]: Time 318.633613 seconds, bootstrap likelihood -300511.403493, best rearrangement setting 12

Bootstrap[674]: Time 125.593264 seconds, bootstrap likelihood -304236.323658, best rearrangement setting 5

Bootstrap[675]: Time 318.455044 seconds, bootstrap likelihood -296923.608456, best rearrangement setting 12

Bootstrap[676]: Time 289.449701 seconds, bootstrap likelihood -319356.734242, best rearrangement setting 11

Bootstrap[677]: Time 131.536157 seconds, bootstrap likelihood -296073.428263, best rearrangement setting 5

Bootstrap[678]: Time 303.871487 seconds, bootstrap likelihood -285327.633082, best rearrangement setting 14

Bootstrap[679]: Time 256.151934 seconds, bootstrap likelihood -282378.908749, best rearrangement setting 9

Bootstrap[680]: Time 447.302715 seconds, bootstrap likelihood -302726.120264, best rearrangement setting 15

Bootstrap[681]: Time 171.715885 seconds, bootstrap likelihood -298255.602991, best rearrangement setting 5

Bootstrap[682]: Time 292.117916 seconds, bootstrap likelihood -272845.386092, best rearrangement setting 12

Bootstrap[683]: Time 220.010156 seconds, bootstrap likelihood -302394.899717, best rearrangement setting 8

Bootstrap[684]: Time 373.462641 seconds, bootstrap likelihood -296575.809179, best rearrangement setting 15

Bootstrap[685]: Time 453.730548 seconds, bootstrap likelihood -295568.887303, best rearrangement setting 14

Bootstrap[686]: Time 179.724073 seconds, bootstrap likelihood -290468.857315, best rearrangement setting 6

Bootstrap[687]: Time 197.943394 seconds, bootstrap likelihood -280085.640236, best rearrangement setting 7

Bootstrap[688]: Time 341.655335 seconds, bootstrap likelihood -301361.105966, best rearrangement setting 12

Bootstrap[689]: Time 192.960082 seconds, bootstrap likelihood -284766.812361, best rearrangement setting 7

Bootstrap[690]: Time 525.436826 seconds, bootstrap likelihood -292412.251496, best rearrangement setting 15

Bootstrap[691]: Time 195.043271 seconds, bootstrap likelihood -286597.557227, best rearrangement setting 8

Bootstrap[692]: Time 130.441986 seconds, bootstrap likelihood -280589.573311, best rearrangement setting 5

Bootstrap[693]: Time 150.792117 seconds, bootstrap likelihood -274876.040109, best rearrangement setting 6

Bootstrap[694]: Time 215.639429 seconds, bootstrap likelihood -304261.474280, best rearrangement setting 8

Bootstrap[695]: Time 354.677183 seconds, bootstrap likelihood -295313.599485, best rearrangement setting 12

Bootstrap[696]: Time 321.477468 seconds, bootstrap likelihood -311080.340418, best rearrangement setting 12

Bootstrap[697]: Time 346.920777 seconds, bootstrap likelihood -298528.308489, best rearrangement setting 15

Bootstrap[698]: Time 307.106640 seconds, bootstrap likelihood -310661.216779, best rearrangement setting 11

Bootstrap[699]: Time 460.666253 seconds, bootstrap likelihood -303557.884885, best rearrangement setting 15

Bootstrap[700]: Time 154.006324 seconds, bootstrap likelihood -286614.095321, best rearrangement setting 6

Bootstrap[701]: Time 160.143943 seconds, bootstrap likelihood -314740.527590, best rearrangement setting 6

Bootstrap[702]: Time 365.807349 seconds, bootstrap likelihood -305025.273832, best rearrangement setting 13

Bootstrap[703]: Time 257.668615 seconds, bootstrap likelihood -291611.687820, best rearrangement setting 11

Bootstrap[704]: Time 290.282532 seconds, bootstrap likelihood -297834.528689, best rearrangement setting 11

Bootstrap[705]: Time 218.736516 seconds, bootstrap likelihood -287478.613839, best rearrangement setting 8

Bootstrap[706]: Time 242.482072 seconds, bootstrap likelihood -280387.339477, best rearrangement setting 10

Bootstrap[707]: Time 473.428485 seconds, bootstrap likelihood -296579.696941, best rearrangement setting 13

Bootstrap[708]: Time 237.032170 seconds, bootstrap likelihood -290513.825781, best rearrangement setting 7

Bootstrap[709]: Time 365.359181 seconds, bootstrap likelihood -296309.448606, best rearrangement setting 14

Bootstrap[710]: Time 407.992010 seconds, bootstrap likelihood -288177.298013, best rearrangement setting 15

Bootstrap[711]: Time 393.133482 seconds, bootstrap likelihood -296812.964957, best rearrangement setting 13

Bootstrap[712]: Time 228.437515 seconds, bootstrap likelihood -282494.405950, best rearrangement setting 9

Bootstrap[713]: Time 138.464359 seconds, bootstrap likelihood -323881.104550, best rearrangement setting 5

Bootstrap[714]: Time 472.507650 seconds, bootstrap likelihood -321200.226493, best rearrangement setting 13

Bootstrap[715]: Time 173.558140 seconds, bootstrap likelihood -307126.083145, best rearrangement setting 6

Bootstrap[716]: Time 393.350308 seconds, bootstrap likelihood -295313.824884, best rearrangement setting 11

Bootstrap[717]: Time 282.697445 seconds, bootstrap likelihood -280832.212951, best rearrangement setting 12

Bootstrap[718]: Time 182.739336 seconds, bootstrap likelihood -311027.282178, best rearrangement setting 8

Bootstrap[719]: Time 395.685433 seconds, bootstrap likelihood -296811.691157, best rearrangement setting 14

Bootstrap[720]: Time 473.464804 seconds, bootstrap likelihood -304864.416519, best rearrangement setting 15

Bootstrap[721]: Time 297.107635 seconds, bootstrap likelihood -281229.639572, best rearrangement setting 10

Bootstrap[722]: Time 283.941814 seconds, bootstrap likelihood -296922.213416, best rearrangement setting 10

Bootstrap[723]: Time 232.912386 seconds, bootstrap likelihood -284615.835645, best rearrangement setting 9

Bootstrap[724]: Time 213.585148 seconds, bootstrap likelihood -288301.903827, best rearrangement setting 8

Bootstrap[725]: Time 395.880210 seconds, bootstrap likelihood -320076.589412, best rearrangement setting 11

Bootstrap[726]: Time 380.445908 seconds, bootstrap likelihood -284114.489041, best rearrangement setting 12

Bootstrap[727]: Time 136.894525 seconds, bootstrap likelihood -296598.909470, best rearrangement setting 5

Bootstrap[728]: Time 345.327036 seconds, bootstrap likelihood -321384.861159, best rearrangement setting 12

Bootstrap[729]: Time 202.080709 seconds, bootstrap likelihood -304220.976007, best rearrangement setting 8

Bootstrap[730]: Time 314.544187 seconds, bootstrap likelihood -301515.519608, best rearrangement setting 12

Bootstrap[731]: Time 251.766935 seconds, bootstrap likelihood -288267.873285, best rearrangement setting 11

Bootstrap[732]: Time 147.611115 seconds, bootstrap likelihood -286230.877281, best rearrangement setting 6

Bootstrap[733]: Time 440.273086 seconds, bootstrap likelihood -285839.633579, best rearrangement setting 13

Bootstrap[734]: Time 267.507882 seconds, bootstrap likelihood -318079.785391, best rearrangement setting 10

Bootstrap[735]: Time 145.019472 seconds, bootstrap likelihood -286626.292974, best rearrangement setting 6

Bootstrap[736]: Time 314.536306 seconds, bootstrap likelihood -282927.992031, best rearrangement setting 11

Bootstrap[737]: Time 276.257176 seconds, bootstrap likelihood -314267.248763, best rearrangement setting 9

Bootstrap[738]: Time 312.010264 seconds, bootstrap likelihood -290236.368354, best rearrangement setting 11

Bootstrap[739]: Time 297.263287 seconds, bootstrap likelihood -292079.750803, best rearrangement setting 12

Bootstrap[740]: Time 302.192323 seconds, bootstrap likelihood -315100.293465, best rearrangement setting 12

Bootstrap[741]: Time 289.152145 seconds, bootstrap likelihood -293454.950814, best rearrangement setting 11

Bootstrap[742]: Time 119.153734 seconds, bootstrap likelihood -309315.848457, best rearrangement setting 5

Bootstrap[743]: Time 261.299788 seconds, bootstrap likelihood -298999.226878, best rearrangement setting 8

Bootstrap[744]: Time 179.439748 seconds, bootstrap likelihood -289464.231150, best rearrangement setting 7

Bootstrap[745]: Time 180.078730 seconds, bootstrap likelihood -295215.892514, best rearrangement setting 6

Bootstrap[746]: Time 187.320470 seconds, bootstrap likelihood -298559.356663, best rearrangement setting 6

Bootstrap[747]: Time 526.758295 seconds, bootstrap likelihood -294190.260627, best rearrangement setting 14

Bootstrap[748]: Time 165.375005 seconds, bootstrap likelihood -280473.698437, best rearrangement setting 7

Bootstrap[749]: Time 195.215793 seconds, bootstrap likelihood -290193.098117, best rearrangement setting 7

Bootstrap[750]: Time 237.653014 seconds, bootstrap likelihood -313540.980419, best rearrangement setting 8

Bootstrap[751]: Time 198.759392 seconds, bootstrap likelihood -256389.671124, best rearrangement setting 8

Bootstrap[752]: Time 209.717139 seconds, bootstrap likelihood -301228.388656, best rearrangement setting 8

Bootstrap[753]: Time 480.361260 seconds, bootstrap likelihood -292695.136135, best rearrangement setting 15

Bootstrap[754]: Time 203.433020 seconds, bootstrap likelihood -294146.351009, best rearrangement setting 7

Bootstrap[755]: Time 174.227258 seconds, bootstrap likelihood -289395.550292, best rearrangement setting 6

Bootstrap[756]: Time 216.288058 seconds, bootstrap likelihood -312739.992795, best rearrangement setting 8

Bootstrap[757]: Time 501.983306 seconds, bootstrap likelihood -292792.094557, best rearrangement setting 15

Bootstrap[758]: Time 419.522681 seconds, bootstrap likelihood -306769.261709, best rearrangement setting 13

Bootstrap[759]: Time 197.626183 seconds, bootstrap likelihood -264548.376970, best rearrangement setting 10

Bootstrap[760]: Time 313.412468 seconds, bootstrap likelihood -289847.653811, best rearrangement setting 11

Bootstrap[761]: Time 203.665610 seconds, bootstrap likelihood -313348.943089, best rearrangement setting 9

Bootstrap[762]: Time 306.234046 seconds, bootstrap likelihood -296725.324063, best rearrangement setting 11

Bootstrap[763]: Time 265.034314 seconds, bootstrap likelihood -309689.615061, best rearrangement setting 10

Bootstrap[764]: Time 207.680524 seconds, bootstrap likelihood -331472.403903, best rearrangement setting 7

Bootstrap[765]: Time 234.094461 seconds, bootstrap likelihood -280159.902372, best rearrangement setting 9

Bootstrap[766]: Time 161.713605 seconds, bootstrap likelihood -295645.169616, best rearrangement setting 6

Bootstrap[767]: Time 174.791659 seconds, bootstrap likelihood -317797.507459, best rearrangement setting 7

Bootstrap[768]: Time 304.784506 seconds, bootstrap likelihood -296501.756387, best rearrangement setting 11

Bootstrap[769]: Time 222.261449 seconds, bootstrap likelihood -302661.586886, best rearrangement setting 10

Bootstrap[770]: Time 401.786777 seconds, bootstrap likelihood -288753.424804, best rearrangement setting 14

Bootstrap[771]: Time 226.621786 seconds, bootstrap likelihood -301761.688944, best rearrangement setting 9

Bootstrap[772]: Time 254.706765 seconds, bootstrap likelihood -292390.421570, best rearrangement setting 10

Bootstrap[773]: Time 380.537716 seconds, bootstrap likelihood -301308.730657, best rearrangement setting 15

Bootstrap[774]: Time 284.290415 seconds, bootstrap likelihood -295847.041966, best rearrangement setting 11

Bootstrap[775]: Time 500.219127 seconds, bootstrap likelihood -306134.305845, best rearrangement setting 13

Bootstrap[776]: Time 395.302252 seconds, bootstrap likelihood -305096.145660, best rearrangement setting 12

Bootstrap[777]: Time 431.829278 seconds, bootstrap likelihood -308621.736454, best rearrangement setting 11

Bootstrap[778]: Time 244.672986 seconds, bootstrap likelihood -313149.263795, best rearrangement setting 7

Bootstrap[779]: Time 284.111804 seconds, bootstrap likelihood -304642.175898, best rearrangement setting 9

Bootstrap[780]: Time 370.878114 seconds, bootstrap likelihood -308763.002771, best rearrangement setting 12

Bootstrap[781]: Time 269.681413 seconds, bootstrap likelihood -268331.854411, best rearrangement setting 8

Bootstrap[782]: Time 223.308086 seconds, bootstrap likelihood -301194.765437, best rearrangement setting 7

Bootstrap[783]: Time 369.504853 seconds, bootstrap likelihood -304089.972386, best rearrangement setting 11

Bootstrap[784]: Time 486.859140 seconds, bootstrap likelihood -302232.779982, best rearrangement setting 13

Bootstrap[785]: Time 465.750708 seconds, bootstrap likelihood -301521.714115, best rearrangement setting 10

Bootstrap[786]: Time 331.488273 seconds, bootstrap likelihood -288031.102359, best rearrangement setting 11

Bootstrap[787]: Time 206.947110 seconds, bootstrap likelihood -303357.513670, best rearrangement setting 6

Bootstrap[788]: Time 576.497624 seconds, bootstrap likelihood -315748.161735, best rearrangement setting 14

Bootstrap[789]: Time 260.042642 seconds, bootstrap likelihood -322072.248097, best rearrangement setting 7

Bootstrap[790]: Time 149.909995 seconds, bootstrap likelihood -279968.594554, best rearrangement setting 5

Bootstrap[791]: Time 238.630719 seconds, bootstrap likelihood -264022.802021, best rearrangement setting 9

Bootstrap[792]: Time 206.167444 seconds, bootstrap likelihood -304488.821483, best rearrangement setting 6

Bootstrap[793]: Time 487.330985 seconds, bootstrap likelihood -275184.818316, best rearrangement setting 12

Bootstrap[794]: Time 509.645099 seconds, bootstrap likelihood -307047.584603, best rearrangement setting 12

Bootstrap[795]: Time 515.706489 seconds, bootstrap likelihood -287634.930313, best rearrangement setting 15

Bootstrap[796]: Time 259.526540 seconds, bootstrap likelihood -319440.589105, best rearrangement setting 7

Bootstrap[797]: Time 370.934729 seconds, bootstrap likelihood -282264.013583, best rearrangement setting 13

Bootstrap[798]: Time 267.540782 seconds, bootstrap likelihood -296764.092048, best rearrangement setting 8

Bootstrap[799]: Time 315.718014 seconds, bootstrap likelihood -316642.531188, best rearrangement setting 8

Bootstrap[800]: Time 590.534360 seconds, bootstrap likelihood -284011.562418, best rearrangement setting 15

Bootstrap[801]: Time 386.963506 seconds, bootstrap likelihood -307049.436691, best rearrangement setting 10

Bootstrap[802]: Time 400.038442 seconds, bootstrap likelihood -300461.953241, best rearrangement setting 11

Bootstrap[803]: Time 186.711258 seconds, bootstrap likelihood -299019.046497, best rearrangement setting 6

Bootstrap[804]: Time 312.483204 seconds, bootstrap likelihood -307477.824963, best rearrangement setting 10

Bootstrap[805]: Time 597.133909 seconds, bootstrap likelihood -296654.005793, best rearrangement setting 14

Bootstrap[806]: Time 425.157939 seconds, bootstrap likelihood -264076.229256, best rearrangement setting 12

Bootstrap[807]: Time 159.268579 seconds, bootstrap likelihood -301393.380946, best rearrangement setting 5

Bootstrap[808]: Time 638.136047 seconds, bootstrap likelihood -292302.170452, best rearrangement setting 14

Bootstrap[809]: Time 748.220914 seconds, bootstrap likelihood -299447.481010, best rearrangement setting 14

Bootstrap[810]: Time 285.108805 seconds, bootstrap likelihood -298064.745583, best rearrangement setting 7

Bootstrap[811]: Time 450.534873 seconds, bootstrap likelihood -297880.164296, best rearrangement setting 12

Bootstrap[812]: Time 647.435021 seconds, bootstrap likelihood -300571.567048, best rearrangement setting 14

Bootstrap[813]: Time 681.459260 seconds, bootstrap likelihood -295215.848654, best rearrangement setting 15

Bootstrap[814]: Time 244.381391 seconds, bootstrap likelihood -283926.660969, best rearrangement setting 8

Bootstrap[815]: Time 674.231481 seconds, bootstrap likelihood -289923.353351, best rearrangement setting 15

Bootstrap[816]: Time 188.812074 seconds, bootstrap likelihood -305913.935202, best rearrangement setting 5

Bootstrap[817]: Time 693.156154 seconds, bootstrap likelihood -297681.988975, best rearrangement setting 13

Bootstrap[818]: Time 495.575787 seconds, bootstrap likelihood -317280.837456, best rearrangement setting 12

Bootstrap[819]: Time 167.776460 seconds, bootstrap likelihood -323043.495548, best rearrangement setting 5

Bootstrap[820]: Time 201.294446 seconds, bootstrap likelihood -313458.160481, best rearrangement setting 6

Bootstrap[821]: Time 369.089765 seconds, bootstrap likelihood -307677.604094, best rearrangement setting 10

Bootstrap[822]: Time 252.416425 seconds, bootstrap likelihood -288236.093911, best rearrangement setting 7

Bootstrap[823]: Time 311.271524 seconds, bootstrap likelihood -303296.242684, best rearrangement setting 7

Bootstrap[824]: Time 302.223889 seconds, bootstrap likelihood -305923.231700, best rearrangement setting 10

Bootstrap[825]: Time 303.780855 seconds, bootstrap likelihood -270747.566092, best rearrangement setting 9

Bootstrap[826]: Time 528.398365 seconds, bootstrap likelihood -308085.179744, best rearrangement setting 14

Bootstrap[827]: Time 351.063431 seconds, bootstrap likelihood -318615.308717, best rearrangement setting 9

Bootstrap[828]: Time 501.972079 seconds, bootstrap likelihood -298416.136472, best rearrangement setting 11

Bootstrap[829]: Time 217.046851 seconds, bootstrap likelihood -292399.170722, best rearrangement setting 5

Bootstrap[830]: Time 360.374406 seconds, bootstrap likelihood -283533.556629, best rearrangement setting 9

Bootstrap[831]: Time 262.280382 seconds, bootstrap likelihood -293960.848986, best rearrangement setting 7

Bootstrap[832]: Time 532.065193 seconds, bootstrap likelihood -303835.210677, best rearrangement setting 12

Bootstrap[833]: Time 349.946691 seconds, bootstrap likelihood -291385.654369, best rearrangement setting 9

Bootstrap[834]: Time 396.770701 seconds, bootstrap likelihood -283786.392828, best rearrangement setting 13

Bootstrap[835]: Time 167.621083 seconds, bootstrap likelihood -280227.105810, best rearrangement setting 5

Bootstrap[836]: Time 339.720153 seconds, bootstrap likelihood -295848.916593, best rearrangement setting 11

Bootstrap[837]: Time 382.307802 seconds, bootstrap likelihood -285330.105846, best rearrangement setting 11

Bootstrap[838]: Time 146.780252 seconds, bootstrap likelihood -295969.089984, best rearrangement setting 5

Bootstrap[839]: Time 160.804746 seconds, bootstrap likelihood -288857.759402, best rearrangement setting 5

Bootstrap[840]: Time 246.730318 seconds, bootstrap likelihood -291641.772782, best rearrangement setting 8

Bootstrap[841]: Time 345.836030 seconds, bootstrap likelihood -298957.621833, best rearrangement setting 9

Bootstrap[842]: Time 195.273094 seconds, bootstrap likelihood -295981.745278, best rearrangement setting 5

Bootstrap[843]: Time 320.068944 seconds, bootstrap likelihood -289846.668450, best rearrangement setting 10

Bootstrap[844]: Time 418.870868 seconds, bootstrap likelihood -299041.024837, best rearrangement setting 13

Bootstrap[845]: Time 312.888359 seconds, bootstrap likelihood -298930.508666, best rearrangement setting 9

Bootstrap[846]: Time 579.938477 seconds, bootstrap likelihood -313722.261547, best rearrangement setting 14

Bootstrap[847]: Time 414.865504 seconds, bootstrap likelihood -294186.590403, best rearrangement setting 11

Bootstrap[848]: Time 279.406797 seconds, bootstrap likelihood -276251.292941, best rearrangement setting 8

Bootstrap[849]: Time 195.695745 seconds, bootstrap likelihood -313448.348575, best rearrangement setting 5

Bootstrap[850]: Time 359.489491 seconds, bootstrap likelihood -308483.917179, best rearrangement setting 8

Bootstrap[851]: Time 510.711423 seconds, bootstrap likelihood -313182.912702, best rearrangement setting 13

Bootstrap[852]: Time 238.446897 seconds, bootstrap likelihood -295738.489164, best rearrangement setting 7

Bootstrap[853]: Time 566.173592 seconds, bootstrap likelihood -321435.012528, best rearrangement setting 13

Bootstrap[854]: Time 679.152945 seconds, bootstrap likelihood -291588.831461, best rearrangement setting 15

Bootstrap[855]: Time 382.710670 seconds, bootstrap likelihood -297711.512392, best rearrangement setting 11

Bootstrap[856]: Time 448.387776 seconds, bootstrap likelihood -280701.374550, best rearrangement setting 13

Bootstrap[857]: Time 189.364489 seconds, bootstrap likelihood -318914.116377, best rearrangement setting 6

Bootstrap[858]: Time 568.723809 seconds, bootstrap likelihood -293267.428273, best rearrangement setting 14

Bootstrap[859]: Time 354.756238 seconds, bootstrap likelihood -307517.274555, best rearrangement setting 10

Bootstrap[860]: Time 467.426298 seconds, bootstrap likelihood -292116.997343, best rearrangement setting 11

Bootstrap[861]: Time 292.626813 seconds, bootstrap likelihood -295770.444477, best rearrangement setting 9

Bootstrap[862]: Time 277.091581 seconds, bootstrap likelihood -316960.398035, best rearrangement setting 8

Bootstrap[863]: Time 513.691087 seconds, bootstrap likelihood -292323.920387, best rearrangement setting 12

Bootstrap[864]: Time 338.546577 seconds, bootstrap likelihood -287711.339898, best rearrangement setting 8

Bootstrap[865]: Time 316.946493 seconds, bootstrap likelihood -302479.633570, best rearrangement setting 8

Bootstrap[866]: Time 641.486916 seconds, bootstrap likelihood -309290.800093, best rearrangement setting 14

Bootstrap[867]: Time 307.631809 seconds, bootstrap likelihood -317617.733756, best rearrangement setting 9

Bootstrap[868]: Time 593.163629 seconds, bootstrap likelihood -298670.055076, best rearrangement setting 14

Bootstrap[869]: Time 272.803453 seconds, bootstrap likelihood -285963.733319, best rearrangement setting 8

Bootstrap[870]: Time 171.899858 seconds, bootstrap likelihood -319848.366291, best rearrangement setting 6

Bootstrap[871]: Time 155.939152 seconds, bootstrap likelihood -296095.913437, best rearrangement setting 5

Bootstrap[872]: Time 233.356094 seconds, bootstrap likelihood -291660.799338, best rearrangement setting 8

Bootstrap[873]: Time 731.089198 seconds, bootstrap likelihood -279973.992325, best rearrangement setting 14

Bootstrap[874]: Time 621.722220 seconds, bootstrap likelihood -291847.725789, best rearrangement setting 15

Bootstrap[875]: Time 277.811588 seconds, bootstrap likelihood -309284.821877, best rearrangement setting 7

Bootstrap[876]: Time 597.680956 seconds, bootstrap likelihood -314290.305121, best rearrangement setting 13

Bootstrap[877]: Time 555.292146 seconds, bootstrap likelihood -310123.405914, best rearrangement setting 13

Bootstrap[878]: Time 443.029600 seconds, bootstrap likelihood -293295.860640, best rearrangement setting 11

Bootstrap[879]: Time 615.217099 seconds, bootstrap likelihood -272641.940400, best rearrangement setting 15

Bootstrap[880]: Time 365.192609 seconds, bootstrap likelihood -292937.091956, best rearrangement setting 11

Bootstrap[881]: Time 262.418602 seconds, bootstrap likelihood -313456.953034, best rearrangement setting 8

Bootstrap[882]: Time 576.051212 seconds, bootstrap likelihood -279706.458652, best rearrangement setting 12

Bootstrap[883]: Time 202.012482 seconds, bootstrap likelihood -285390.616991, best rearrangement setting 5

Bootstrap[884]: Time 628.325704 seconds, bootstrap likelihood -295647.878987, best rearrangement setting 13

Bootstrap[885]: Time 272.034668 seconds, bootstrap likelihood -289274.147829, best rearrangement setting 9

Bootstrap[886]: Time 310.166862 seconds, bootstrap likelihood -297542.272618, best rearrangement setting 8

Bootstrap[887]: Time 216.030388 seconds, bootstrap likelihood -279169.945373, best rearrangement setting 5

Bootstrap[888]: Time 341.859226 seconds, bootstrap likelihood -296224.773548, best rearrangement setting 9

Bootstrap[889]: Time 356.141006 seconds, bootstrap likelihood -294799.928583, best rearrangement setting 11

Bootstrap[890]: Time 528.559331 seconds, bootstrap likelihood -293476.395330, best rearrangement setting 14

Bootstrap[891]: Time 601.953178 seconds, bootstrap likelihood -298730.541001, best rearrangement setting 14

Bootstrap[892]: Time 818.126418 seconds, bootstrap likelihood -318778.850958, best rearrangement setting 15

Bootstrap[893]: Time 218.304311 seconds, bootstrap likelihood -301103.419135, best rearrangement setting 6

Bootstrap[894]: Time 574.656365 seconds, bootstrap likelihood -295765.484312, best rearrangement setting 13

Bootstrap[895]: Time 602.548892 seconds, bootstrap likelihood -308232.507646, best rearrangement setting 13

Bootstrap[896]: Time 201.865009 seconds, bootstrap likelihood -323695.153261, best rearrangement setting 5

Bootstrap[897]: Time 296.487954 seconds, bootstrap likelihood -283798.875115, best rearrangement setting 8

Bootstrap[898]: Time 203.126065 seconds, bootstrap likelihood -293573.256301, best rearrangement setting 5

Bootstrap[899]: Time 796.655114 seconds, bootstrap likelihood -302003.726087, best rearrangement setting 15

Bootstrap[900]: Time 263.833260 seconds, bootstrap likelihood -277684.650439, best rearrangement setting 8

Bootstrap[901]: Time 315.692300 seconds, bootstrap likelihood -289365.246227, best rearrangement setting 8

Bootstrap[902]: Time 786.809504 seconds, bootstrap likelihood -286561.512768, best rearrangement setting 14

Bootstrap[903]: Time 314.427996 seconds, bootstrap likelihood -325123.259382, best rearrangement setting 8

Bootstrap[904]: Time 382.456343 seconds, bootstrap likelihood -283254.983924, best rearrangement setting 12

Bootstrap[905]: Time 635.635645 seconds, bootstrap likelihood -323842.787700, best rearrangement setting 14

Bootstrap[906]: Time 212.203334 seconds, bootstrap likelihood -331444.954020, best rearrangement setting 7

Bootstrap[907]: Time 619.642883 seconds, bootstrap likelihood -297037.738402, best rearrangement setting 15

Bootstrap[908]: Time 169.800246 seconds, bootstrap likelihood -313041.428185, best rearrangement setting 5

Bootstrap[909]: Time 287.945813 seconds, bootstrap likelihood -303287.148969, best rearrangement setting 10

Bootstrap[910]: Time 600.020901 seconds, bootstrap likelihood -281067.941838, best rearrangement setting 15

Bootstrap[911]: Time 333.541027 seconds, bootstrap likelihood -298502.152087, best rearrangement setting 10

Bootstrap[912]: Time 273.811240 seconds, bootstrap likelihood -259311.217217, best rearrangement setting 8

Bootstrap[913]: Time 701.786563 seconds, bootstrap likelihood -307724.304683, best rearrangement setting 15

Bootstrap[914]: Time 587.197732 seconds, bootstrap likelihood -301968.131311, best rearrangement setting 14

Bootstrap[915]: Time 201.931925 seconds, bootstrap likelihood -292119.560414, best rearrangement setting 6

Bootstrap[916]: Time 690.667522 seconds, bootstrap likelihood -301116.250110, best rearrangement setting 14

Bootstrap[917]: Time 543.507859 seconds, bootstrap likelihood -290858.411288, best rearrangement setting 13

Bootstrap[918]: Time 272.281073 seconds, bootstrap likelihood -300052.906914, best rearrangement setting 7

Bootstrap[919]: Time 440.025854 seconds, bootstrap likelihood -290327.150177, best rearrangement setting 11

Bootstrap[920]: Time 520.309676 seconds, bootstrap likelihood -299039.108561, best rearrangement setting 11

Bootstrap[921]: Time 356.731655 seconds, bootstrap likelihood -295378.227691, best rearrangement setting 11

Bootstrap[922]: Time 452.331691 seconds, bootstrap likelihood -295511.688399, best rearrangement setting 12

Bootstrap[923]: Time 271.692116 seconds, bootstrap likelihood -305136.544824, best rearrangement setting 9

Bootstrap[924]: Time 839.372433 seconds, bootstrap likelihood -309369.248023, best rearrangement setting 15

Bootstrap[925]: Time 455.708625 seconds, bootstrap likelihood -293115.350704, best rearrangement setting 12

Bootstrap[926]: Time 470.385403 seconds, bootstrap likelihood -311190.609765, best rearrangement setting 13

Bootstrap[927]: Time 429.524575 seconds, bootstrap likelihood -277390.666307, best rearrangement setting 11

Bootstrap[928]: Time 479.707429 seconds, bootstrap likelihood -300121.669378, best rearrangement setting 12

Bootstrap[929]: Time 498.162039 seconds, bootstrap likelihood -298496.045050, best rearrangement setting 13

Bootstrap[930]: Time 237.286641 seconds, bootstrap likelihood -312482.680231, best rearrangement setting 6

Bootstrap[931]: Time 210.302012 seconds, bootstrap likelihood -290986.544728, best rearrangement setting 5

Bootstrap[932]: Time 382.639166 seconds, bootstrap likelihood -290266.245301, best rearrangement setting 11

Bootstrap[933]: Time 171.699582 seconds, bootstrap likelihood -292095.663750, best rearrangement setting 5

Bootstrap[934]: Time 524.925705 seconds, bootstrap likelihood -304967.289091, best rearrangement setting 13

Bootstrap[935]: Time 204.736974 seconds, bootstrap likelihood -286883.041391, best rearrangement setting 6

Bootstrap[936]: Time 671.351541 seconds, bootstrap likelihood -308903.088159, best rearrangement setting 14

Bootstrap[937]: Time 337.945517 seconds, bootstrap likelihood -298078.693895, best rearrangement setting 8

Bootstrap[938]: Time 361.617196 seconds, bootstrap likelihood -288014.437782, best rearrangement setting 9

Bootstrap[939]: Time 283.532608 seconds, bootstrap likelihood -290486.102346, best rearrangement setting 8

Bootstrap[940]: Time 220.076269 seconds, bootstrap likelihood -304507.268133, best rearrangement setting 6

Bootstrap[941]: Time 181.739883 seconds, bootstrap likelihood -287092.623166, best rearrangement setting 5

Bootstrap[942]: Time 523.284432 seconds, bootstrap likelihood -311204.964520, best rearrangement setting 13

Bootstrap[943]: Time 203.214937 seconds, bootstrap likelihood -285314.956598, best rearrangement setting 5

Bootstrap[944]: Time 534.939351 seconds, bootstrap likelihood -305878.206598, best rearrangement setting 11

Bootstrap[945]: Time 248.017103 seconds, bootstrap likelihood -284686.035203, best rearrangement setting 7

Bootstrap[946]: Time 355.046142 seconds, bootstrap likelihood -311757.658344, best rearrangement setting 9

Bootstrap[947]: Time 167.044053 seconds, bootstrap likelihood -297249.818669, best rearrangement setting 5

Bootstrap[948]: Time 301.964883 seconds, bootstrap likelihood -282430.317204, best rearrangement setting 9

Bootstrap[949]: Time 369.571504 seconds, bootstrap likelihood -301197.277924, best rearrangement setting 10

Bootstrap[950]: Time 210.283365 seconds, bootstrap likelihood -311247.223966, best rearrangement setting 5

Bootstrap[951]: Time 167.223071 seconds, bootstrap likelihood -285991.105967, best rearrangement setting 5

Bootstrap[952]: Time 206.585228 seconds, bootstrap likelihood -297375.534688, best rearrangement setting 7

Bootstrap[953]: Time 186.266829 seconds, bootstrap likelihood -313948.495732, best rearrangement setting 5

Bootstrap[954]: Time 663.291324 seconds, bootstrap likelihood -273200.125896, best rearrangement setting 15

Bootstrap[955]: Time 165.110430 seconds, bootstrap likelihood -300133.377279, best rearrangement setting 5

Bootstrap[956]: Time 538.412469 seconds, bootstrap likelihood -280603.680341, best rearrangement setting 12

Bootstrap[957]: Time 442.612472 seconds, bootstrap likelihood -294796.549610, best rearrangement setting 12

Bootstrap[958]: Time 203.035669 seconds, bootstrap likelihood -291406.632324, best rearrangement setting 7

Bootstrap[959]: Time 265.518064 seconds, bootstrap likelihood -306631.205801, best rearrangement setting 8

Bootstrap[960]: Time 594.136188 seconds, bootstrap likelihood -292697.823437, best rearrangement setting 13

Bootstrap[961]: Time 221.691677 seconds, bootstrap likelihood -320770.909372, best rearrangement setting 7

Bootstrap[962]: Time 271.861107 seconds, bootstrap likelihood -314849.094182, best rearrangement setting 9

Bootstrap[963]: Time 348.484642 seconds, bootstrap likelihood -269684.852602, best rearrangement setting 11

Bootstrap[964]: Time 514.667777 seconds, bootstrap likelihood -297939.564315, best rearrangement setting 11

Bootstrap[965]: Time 244.383306 seconds, bootstrap likelihood -309020.314110, best rearrangement setting 6

Bootstrap[966]: Time 292.783542 seconds, bootstrap likelihood -302168.699269, best rearrangement setting 7

Bootstrap[967]: Time 184.439320 seconds, bootstrap likelihood -271387.469405, best rearrangement setting 5

Bootstrap[968]: Time 188.680692 seconds, bootstrap likelihood -280485.051129, best rearrangement setting 6

Bootstrap[969]: Time 213.342624 seconds, bootstrap likelihood -269676.340418, best rearrangement setting 7

Bootstrap[970]: Time 506.128824 seconds, bootstrap likelihood -279181.641650, best rearrangement setting 13

Bootstrap[971]: Time 362.872926 seconds, bootstrap likelihood -286529.260231, best rearrangement setting 11

Bootstrap[972]: Time 322.654083 seconds, bootstrap likelihood -293018.220064, best rearrangement setting 9

Bootstrap[973]: Time 210.369252 seconds, bootstrap likelihood -268425.590762, best rearrangement setting 6

Bootstrap[974]: Time 787.212203 seconds, bootstrap likelihood -283735.450221, best rearrangement setting 15

Bootstrap[975]: Time 251.136477 seconds, bootstrap likelihood -321197.395361, best rearrangement setting 8

Bootstrap[976]: Time 213.413057 seconds, bootstrap likelihood -282339.470164, best rearrangement setting 7

Bootstrap[977]: Time 442.463636 seconds, bootstrap likelihood -293227.527399, best rearrangement setting 12

Bootstrap[978]: Time 432.642358 seconds, bootstrap likelihood -296740.952913, best rearrangement setting 10

Bootstrap[979]: Time 267.879824 seconds, bootstrap likelihood -293755.216777, best rearrangement setting 7

Bootstrap[980]: Time 823.603892 seconds, bootstrap likelihood -295200.245059, best rearrangement setting 15

Bootstrap[981]: Time 209.105103 seconds, bootstrap likelihood -278392.103666, best rearrangement setting 7

Bootstrap[982]: Time 567.544582 seconds, bootstrap likelihood -292258.575296, best rearrangement setting 13

Bootstrap[983]: Time 464.361719 seconds, bootstrap likelihood -299573.564074, best rearrangement setting 11

Bootstrap[984]: Time 363.244200 seconds, bootstrap likelihood -302343.360587, best rearrangement setting 11

Bootstrap[985]: Time 672.414597 seconds, bootstrap likelihood -295289.824077, best rearrangement setting 15

Bootstrap[986]: Time 514.733401 seconds, bootstrap likelihood -299608.461814, best rearrangement setting 13

Bootstrap[987]: Time 629.447588 seconds, bootstrap likelihood -297415.003473, best rearrangement setting 15

Bootstrap[988]: Time 694.045106 seconds, bootstrap likelihood -289257.032598, best rearrangement setting 13

Bootstrap[989]: Time 432.042116 seconds, bootstrap likelihood -302997.831109, best rearrangement setting 12

Bootstrap[990]: Time 380.406676 seconds, bootstrap likelihood -275398.840033, best rearrangement setting 11

Bootstrap[991]: Time 253.203267 seconds, bootstrap likelihood -292764.393124, best rearrangement setting 8

Bootstrap[992]: Time 332.178078 seconds, bootstrap likelihood -309176.259125, best rearrangement setting 9

Bootstrap[993]: Time 280.587658 seconds, bootstrap likelihood -320911.638860, best rearrangement setting 7

Bootstrap[994]: Time 182.982525 seconds, bootstrap likelihood -297169.441341, best rearrangement setting 5

Bootstrap[995]: Time 362.627014 seconds, bootstrap likelihood -292028.206699, best rearrangement setting 10

Bootstrap[996]: Time 267.695722 seconds, bootstrap likelihood -276644.461121, best rearrangement setting 8

Bootstrap[997]: Time 266.060344 seconds, bootstrap likelihood -290651.656746, best rearrangement setting 8

Bootstrap[998]: Time 777.614981 seconds, bootstrap likelihood -312025.645463, best rearrangement setting 15

Bootstrap[999]: Time 407.461372 seconds, bootstrap likelihood -269047.025999, best rearrangement setting 12

Overall Time for 1000 Rapid Bootstraps 263301.336749 seconds

Average Time per Rapid Bootstrap 263.301337 seconds

Starting ML Search ...

Automatic protein model assignment algorithm using ML criterion:

Partition: 0 best-scoring AA model: JTT likelihood -298871.065677 with empirical base frequencies

Automatic protein model assignment algorithm using ML criterion:

Partition: 0 best-scoring AA model: JTT likelihood -298817.923498 with empirical base frequencies

Automatic protein model assignment algorithm using ML criterion:

Partition: 0 best-scoring AA model: JTT likelihood -298793.238574 with empirical base frequencies

Automatic protein model assignment algorithm using ML criterion:

Partition: 0 best-scoring AA model: JTT likelihood -298792.297648 with empirical base frequencies

Is how long it is taking to be expected based on file size?

I'm just hoping it isn't hung up on something like it was the last time.

[Alexey Kozlov]

Hi,

you have used too many threads (25) for your short alignment, this has been discussed million times
on this google group and elsewhere.

If you absolutely need to stick to old RAxML, please use MPI version which offers coarse-grained
parallelization (again, it has been discussed at length in this group, please use search).

However, I would strongly recommend switching to RAxML-NG, in your case you should better use
coarse-grained parallelization with 5-10 parallel searches (eg "--workers 5"):

https://github.com/amkozlov/raxml-ng/wiki/Installation#building-coarse-grained-parallelization-branch

Best,
Alexey

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