Error - Segmentation fault Analysis aborted

[Alejandra Camacho]

Hi everyone

I am trying to run a simple phylogenetic analysis on a not so large sample, only 71 mitogenome sequences, using the best partitioning scheme I got from IQ-TREE. I am running the analyses in the cluster of my institution using slurm as queuing system

 I got this error

 /var/spool/slurm/d/job25822185/slurm_script: line 14: 69642 Segmentation fault      raxml-ng --all --msa FcC_supermatrix.fas --model FcC_supermatrix_partition8.txt --threads auto{8} --bs-trees autoMRE --bs-metric fbp,tbe

Could someone please help me? Apparently is not a memory problem because I tried that solution, and the problem persists.

Thanks!

Ale

[Alexey Kozlov]

Hi Alejandra,

please send me your input files as well as full raxml.log file, and I will have a look.

Best,
Alexey

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