Next I made tonemapped pictures with my HDR-programm and then I stitched with PTGui - the result was a little bit better. And I have the possibility to repair the bad areas with Photoshop and the equivalent tonemapped photo. But the tonemapped photos are not warped and do not fit with the panorama. Photoshop does align but not so perfect.
Now I am still searching for a better way to get an overall sharp panorama.
Many thanks for any suggestion!