METIS Issue during Installation Process

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Edward Read

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Aug 17, 2020, 9:14:31 PM8/17/20
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Hello,

I am trying to install Deal.ii on my new cluster, from the build screen output it looks there is a problem in finding METIS (which is installed). I am not exactly sure what is going on? Is there a way to hard code the METIS Path during the make process? I have attached the screen out from the CMAKE. Any thoughts or suggestions would greatly be appreciated.

Thanks!
Dealii CMAKE Screen.txt

Wolfgang Bangerth

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Aug 18, 2020, 9:08:09 AM8/18/20
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Which version of METIS is this, and how did you install it? The error messages
are all about a (presumed macro) METIS_EXPORT, but the version I have locally
doesn't have that macro at all.

Best
W.


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Ed Read

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Aug 18, 2020, 12:37:53 PM8/18/20
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I re-installed METIS using the following commands:
make config shared=1 cc=gcc prefix=~/local ..
make install

I was able to get passed the original METIS_EXPORT issue only to get it again in another area of the build... However, it did not crash the build. I received a different error, which might be related to memory... I have attached my cmake logs, as well as a console output:

[ 76%] Built target obj_hp_debug
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/persistent_tria.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/tria_accessor.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/tria_description.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/tria_faces.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/tria_levels.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/tria_objects.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_generator_from_name.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_in.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_out.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_generator.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_tools.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_tools_2.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_tools_cache.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_tools_nontemplates.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/grid_tools_dof_handlers.cc.o
[ 76%] Building CXX object source/grid/CMakeFiles/obj_grid_debug.dir/tria.cc.o
[ 76%] Built target obj_grid_debug
Makefile:149: recipe for target 'all' failed
make: *** [all] Error 2


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CMakeCache.txt
CMakeError.log

Wolfgang Bangerth

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Aug 18, 2020, 12:39:28 PM8/18/20
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On 8/18/20 10:37 AM, Ed Read wrote:
>
> [ 76%] Built target obj_grid_debug
> Makefile:149: recipe for target 'all' failed

The error is somewhere higher up. Run 'make -j1' and see what it gives you.

Ed Read

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Aug 18, 2020, 1:44:17 PM8/18/20
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It does not even make it in the Build target obj_grid_debug and crashes with the METIS error as before. I will try and do 'make clean' with a serial build and see if that might help solve the problem.

Thanks,

Ed

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Wolfgang Bangerth

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Aug 18, 2020, 4:59:29 PM8/18/20
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On 8/18/20 11:44 AM, Ed Read wrote:
> It does not even make it in the Build target obj_grid_debug and crashes with
> the METIS error as before. I will try and do 'make clean' with a serial build
> and see if that might help solve the problem.

That would surprise me, but give it a try. I'll come back to my original
question: What version of METIS is this, and how did you install it?

Best
W>
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