Re: installation bug
Paolo Di Tommaso
Hi Lu,
Are you using CentOS? The could be that the precompiled installer works with the most common linux distributions, but there could be some incompatibility on some specific platform.
Let me know with Linux distribution (and version) are you using and I will help you to solve the problem.
Cheers,
Paolo Di Tommaso
Software Engineer
Comparative Bioinformatics Group
Centre de Regulacio Genomica (CRG)
Dr. Aiguader, 88
08003 Barcelona, Spain
>
> On Aug 20, 2011, at 12:34 PM, Lu Fan <leand...@gmail.com> wrote:
>
>> Hi, I just installed t-coffee 8.99 on my linux server x86_64, as a user. However not able to run it. here is the error information,
>>
>> t_coffee: /lib64/libc.so.6: version `GLIBC_2.7' not found (required by t_coffee)
>>
>> How to fix it, please?
>>
>> Regards,
>> Lu Fan
>> PhD student
>> Centre for Marine Bio-Innovation
>> School of Biotechnology and Biomolecular Sciences
>> Biological Sciences Building (D26)
>> The University of New South Wales
>> Sydney
>> NSW 2052
>> Mobile: 04 3389 0906
>> E-mail: leand...@gmail.com
>>
>>
>>
>>
>>
>>
Jake Lin
Paolo Di Tommaso
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Ben Eisenbraun
>> On Feb 29, 2012, at 12:45 AM, Jake Lin wrote:
>>
>> Can you please post the fix with the run time error of
>> t_coffee: /lib64/libc.so.6: version `GLIBC_2.7' not found (required by t_coffee)?
>>
>> Here are the linux server specs:
>> 2.6.18-274.12.1.el5 #1 SMP Tue Nov 29 13:37:46 EST 2011 x86_64 x86_64 x86_64 GNU/Linux
>
The .el5 in the version string gives away that it's Red Hat Enterprise
Linux 5, or one of the downstream distros (CentOS, Scientific Linux).
Here is my CentOS 5 64-bit build/test virtual machine:
$ uname -a
Linux sbgrid-dev-vm-11 2.6.18-194.17.1.el5 #1 SMP Wed Sep 29 12:50:31 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux
$ /lib64/libc.so.6 | head -n 1
GNU C Library stable release version 2.5, by Roland McGrath et al.
I think Jake's next step is to build from source.
-ben
--
| Ben Eisenbraun
| SBGrid Consortium | http://sbgrid.org |
| Harvard Medical School | http://hms.harvard.edu |