Good morning:
I am trying to do a positive pixel count on the enclosed image. I have adjusted the detection parameters so qupath can see the Fast Red chromagen. When I run a test analysis on a small box within the image, the software generates exactly the data I am trying to measure. However, when I request analysis on the entire annotated area, the software does not report a result. I wonder if the annotated area is too large, if my computer does not have sufficient resources, or if there is some way to adjust the software to take full advantage of the computer resources? I am running a Lenovo ThinkPad with an I5 processor 2.3 GHz with 8GB of RAM.
Thanks,
Jim