CytosacpeRPC problem using

26 views
Skip to first unread message

Jamal Theodore

unread,
Mar 13, 2012, 4:28:27 PM3/13/12
to cytoscap...@googlegroups.com
Hi All,

Why am I getting an error trying to execute the following function in Perl with CytoscapeRPC?

    $done = $client->call(
            'Cytoscape.getNodesByStringAttr',
            $coder->string('node_type'),
            $coder->string('Proteome')
            );

Error:

Fault returned from XML RPC Server, fault code 0: Failed to invoke method getNodesByStringAttr
in class tudelft.CytoscapeRPC.CytoscapeRPCCallHandler: null

I think it's the correct syntax because when I change the function name I get a different error. Also other functions such as $client->call( 'Cytoscape.setSelectedNodes',... work fine.  What else could be wrong?

Thanks,
Jamal

Jan Bot

unread,
Mar 22, 2012, 4:00:36 PM3/22/12
to cytoscap...@googlegroups.com
Hi Jamal,

I need to look into this, I currently can't see what's going wrong.

Cheers,

Jan


--
You received this message because you are subscribed to the Google Groups "cytoscape-discuss" group.
To view this discussion on the web visit https://groups.google.com/d/msg/cytoscape-discuss/-/2Ia5gdn6DRsJ.
To post to this group, send email to cytoscap...@googlegroups.com.
To unsubscribe from this group, send email to cytoscape-disc...@googlegroups.com.
For more options, visit this group at http://groups.google.com/group/cytoscape-discuss?hl=en.

Jan Bot

unread,
Mar 26, 2012, 1:54:47 PM3/26/12
to cytoscap...@googlegroups.com
Hi Jamal,

I've just tested this using Python and then it seems to work. Have you tried other cases?

Cheers,

Jan
Reply all
Reply to author
Forward
0 new messages