11-Nov-2021 19:44:32.617 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version name: Apache Tomcat/9.0.31 (Ubuntu) 11-Nov-2021 19:44:32.622 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built: Oct 20 2020 12:27:39 UTC 11-Nov-2021 19:44:32.622 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version number: 9.0.31.0 11-Nov-2021 19:44:32.622 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name: Linux 11-Nov-2021 19:44:32.623 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version: 5.11.0-1021-azure 11-Nov-2021 19:44:32.623 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture: amd64 11-Nov-2021 19:44:32.623 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home: /usr/lib/jvm/java-8-openjdk-amd64/jre 11-Nov-2021 19:44:32.624 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version: 1.8.0_292-8u292-b10-0ubuntu1~20.04-b10 11-Nov-2021 19:44:32.624 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor: Private Build 11-Nov-2021 19:44:32.624 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE: /var/lib/tomcat9 11-Nov-2021 19:44:32.624 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME: /usr/share/tomcat9 11-Nov-2021 19:44:32.651 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/var/lib/tomcat9/conf/logging.properties 11-Nov-2021 19:44:32.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager 11-Nov-2021 19:44:32.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.awt.headless=true 11-Nov-2021 19:44:32.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048 11-Nov-2021 19:44:32.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources 11-Nov-2021 19:44:32.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dorg.apache.catalina.security.SecurityListener.UMASK=0027 11-Nov-2021 19:44:32.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Xms512m 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Xmx2g 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -XX:+UseConcMarkSweepGC 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -XX:-OmitStackTraceInFastThrow 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dxnat.home=/data/xnat/home 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dignore.endorsed.dirs= 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/var/lib/tomcat9 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/usr/share/tomcat9 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/tmp 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent Loaded APR based Apache Tomcat Native library [1.2.23] using APR version [1.6.5]. 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent APR capabilities: IPv6 [true], sendfile [true], accept filters [false], random [true]. 11-Nov-2021 19:44:32.653 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent APR/OpenSSL configuration: useAprConnector [false], useOpenSSL [true] 11-Nov-2021 19:44:32.656 INFO [main] org.apache.catalina.core.AprLifecycleListener.initializeSSL OpenSSL successfully initialized [OpenSSL 1.1.1f 31 Mar 2020] 11-Nov-2021 19:44:33.259 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"] 11-Nov-2021 19:44:33.327 INFO [main] org.apache.catalina.startup.Catalina.load Server initialization in [1,068] milliseconds 11-Nov-2021 19:44:33.379 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina] 11-Nov-2021 19:44:33.379 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet engine: [Apache Tomcat/9.0.31 (Ubuntu)] 11-Nov-2021 19:44:33.394 INFO [main] org.apache.catalina.startup.HostConfig.deployDescriptor Deploying deployment descriptor [/etc/tomcat9/Catalina/localhost/manager.xml] 11-Nov-2021 19:44:33.420 WARNING [main] org.apache.catalina.startup.HostConfig.deployDescriptor The path attribute with value [/manager] in deployment descriptor [/etc/tomcat9/Catalina/localhost/manager.xml] has been ignored 11-Nov-2021 19:44:34.581 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time. 11-Nov-2021 19:44:34.637 INFO [main] org.apache.catalina.startup.HostConfig.deployDescriptor Deployment of deployment descriptor [/etc/tomcat9/Catalina/localhost/manager.xml] has finished in [1,243] ms 11-Nov-2021 19:44:34.638 INFO [main] org.apache.catalina.startup.HostConfig.deployDescriptor Deploying deployment descriptor [/etc/tomcat9/Catalina/localhost/host-manager.xml] 11-Nov-2021 19:44:34.640 WARNING [main] org.apache.catalina.startup.HostConfig.deployDescriptor The path attribute with value [/host-manager] in deployment descriptor [/etc/tomcat9/Catalina/localhost/host-manager.xml] has been ignored 11-Nov-2021 19:44:35.391 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time. 11-Nov-2021 19:44:35.395 INFO [main] org.apache.catalina.startup.HostConfig.deployDescriptor Deployment of deployment descriptor [/etc/tomcat9/Catalina/localhost/host-manager.xml] has finished in [757] ms 11-Nov-2021 19:44:35.401 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deploying web application archive [/var/lib/tomcat9/webapps/xnat-web-1.8.3.war] 11-Nov-2021 19:44:48.617 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time. 11-Nov-2021 19:44:49.128 SEVERE [main] org.apache.catalina.startup.HostConfig.deployWAR Error deploying web application archive [/var/lib/tomcat9/webapps/xnat-web-1.8.3.war] java.lang.IllegalStateException: Error starting child at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:720) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:690) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:705) at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:978) at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1849) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75) at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:112) at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:773) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:427) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1576) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:309) at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123) at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:423) at org.apache.catalina.util.LifecycleBase.setState(LifecycleBase.java:366) at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:936) at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:841) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1384) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1374) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75) at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134) at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:909) at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:262) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183) at org.apache.catalina.core.StandardService.startInternal(StandardService.java:421) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183) at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:930) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183) at org.apache.catalina.startup.Catalina.start(Catalina.java:633) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:343) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:478) Caused by: org.apache.catalina.LifecycleException: Failed to start component [StandardEngine[Catalina].StandardHost[localhost].StandardContext[/xnat-web-1.8.3]] at org.apache.catalina.util.LifecycleBase.handleSubClassException(LifecycleBase.java:440) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:198) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:717) ... 37 more Caused by: org.nrg.framework.exceptions.NrgServiceRuntimeException: Error [Unknown]: Error [Unknown]: An error occurred trying to create the temp folder xnat_23930818095996 in the containing folder /data/xnat/home at org.nrg.xnat.initialization.XnatWebAppInitializer.getMultipartConfigElement(XnatWebAppInitializer.java:136) at org.nrg.xnat.initialization.XnatWebAppInitializer.customizeRegistration(XnatWebAppInitializer.java:99) at org.springframework.web.servlet.support.AbstractDispatcherServletInitializer.registerDispatcherServlet(AbstractDispatcherServletInitializer.java:113) at org.springframework.web.servlet.support.AbstractDispatcherServletInitializer.onStartup(AbstractDispatcherServletInitializer.java:71) at org.nrg.xnat.initialization.XnatWebAppInitializer.onStartup(XnatWebAppInitializer.java:60) at org.springframework.web.SpringServletContainerInitializer.onStartup(SpringServletContainerInitializer.java:169) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5135) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183) ... 38 more Caused by: java.nio.file.FileSystemException: /data/xnat/home/work/xnat_23930818095996361380384497629069: Read-only file system at sun.nio.fs.UnixException.translateToIOException(UnixException.java:91) at sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:102) at sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:107) at sun.nio.fs.UnixFileSystemProvider.createDirectory(UnixFileSystemProvider.java:384) at java.nio.file.Files.createDirectory(Files.java:674) at java.nio.file.TempFileHelper.create(TempFileHelper.java:136) at java.nio.file.TempFileHelper.createTempDirectory(TempFileHelper.java:173) at java.nio.file.Files.createTempDirectory(Files.java:950) at org.nrg.xnat.initialization.XnatWebAppInitializer.getMultipartConfigElement(XnatWebAppInitializer.java:118) ... 45 more 11-Nov-2021 19:44:49.137 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deployment of web application archive [/var/lib/tomcat9/webapps/xnat-web-1.8.3.war] has finished in [13,736] ms 11-Nov-2021 19:44:49.138 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/var/lib/tomcat9/webapps/ROOT] 11-Nov-2021 19:44:49.930 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time. 11-Nov-2021 19:44:49.939 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/var/lib/tomcat9/webapps/ROOT] has finished in [801] ms 11-Nov-2021 19:44:49.943 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8080"] 11-Nov-2021 19:44:49.952 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in [16,624] milliseconds