/u/system/soft/SLE_12/packages/x86_64/cmake/3.15.2/bin/cmake -S/u/forero/src/votca -B/u/forero/src/votca/builddir --check-build-system CMakeFiles/Makefile.cmake 0 /u/system/soft/SLE_12/packages/x86_64/cmake/3.15.2/bin/cmake -E cmake_progress_start /u/forero/src/votca/builddir/CMakeFiles /u/forero/src/votca/builddir/CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/cobra/u/forero/src/votca/builddir' /usr/bin/gmake -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/depend gmake[2]: Entering directory '/cobra/u/forero/src/votca/builddir' cd /u/forero/src/votca/builddir && /u/system/soft/SLE_12/packages/x86_64/cmake/3.15.2/bin/cmake -E cmake_depends "Unix Makefiles" /u/forero/src/votca /u/forero/src/votca/tools/share/man /u/forero/src/votca/builddir /u/forero/src/votca/builddir/tools/share/man /u/forero/src/votca/builddir/tools/share/man/CMakeFiles/votca_tools_manpages.dir/DependInfo.cmake --color= gmake[2]: Leaving directory '/cobra/u/forero/src/votca/builddir' /usr/bin/gmake -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/build gmake[2]: Entering directory '/cobra/u/forero/src/votca/builddir' gmake[2]: Nothing to be done for 'tools/share/man/CMakeFiles/votca_tools_manpages.dir/build'. gmake[2]: Leaving directory '/cobra/u/forero/src/votca/builddir' [ 0%] Built target votca_tools_manpages /usr/bin/gmake -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/depend gmake[2]: Entering directory '/cobra/u/forero/src/votca/builddir' cd /u/forero/src/votca/builddir && /u/system/soft/SLE_12/packages/x86_64/cmake/3.15.2/bin/cmake -E cmake_depends "Unix Makefiles" /u/forero/src/votca /u/forero/src/votca/tools/src/libtools /u/forero/src/votca/builddir /u/forero/src/votca/builddir/tools/src/libtools /u/forero/src/votca/builddir/tools/src/libtools/CMakeFiles/gitversion.dir/DependInfo.cmake --color= gmake[2]: Leaving directory '/cobra/u/forero/src/votca/builddir' /usr/bin/gmake -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/build gmake[2]: Entering directory '/cobra/u/forero/src/votca/builddir' cd /u/forero/src/votca/builddir/tools/src/libtools && /cobra/u/system/soft/SLE_12/packages/x86_64/cmake/3.15.2/bin/cmake -DTOP_SOURCE_DIR="/u/forero/src/votca" -DGIT_EXECUTABLE="/usr/bin/git" -P /u/forero/src/votca/tools/CMakeModules/gitversion.cmake Current git revision is 9b6bbd0 gmake[2]: Leaving directory '/cobra/u/forero/src/votca/builddir' [ 0%] Built target gitversion /usr/bin/gmake -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/depend gmake[2]: Entering directory '/cobra/u/forero/src/votca/builddir' cd /u/forero/src/votca/builddir && /u/system/soft/SLE_12/packages/x86_64/cmake/3.15.2/bin/cmake -E cmake_depends "Unix Makefiles" /u/forero/src/votca /u/forero/src/votca/tools/src/libtools /u/forero/src/votca/builddir /u/forero/src/votca/builddir/tools/src/libtools /u/forero/src/votca/builddir/tools/src/libtools/CMakeFiles/votca_tools.dir/DependInfo.cmake --color= gmake[2]: Leaving directory '/cobra/u/forero/src/votca/builddir' /usr/bin/gmake -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/build gmake[2]: Entering directory '/cobra/u/forero/src/votca/builddir' gmake[2]: Nothing to be done for 'tools/src/libtools/CMakeFiles/votca_tools.dir/build'. gmake[2]: Leaving directory '/cobra/u/forero/src/votca/builddir' [ 27%] Built target votca_tools /usr/bin/gmake -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/depend gmake[2]: Entering directory '/cobra/u/forero/src/votca/builddir' cd /u/forero/src/votca/builddir && /u/system/soft/SLE_12/packages/x86_64/cmake/3.15.2/bin/cmake -E cmake_depends "Unix Makefiles" /u/forero/src/votca /u/forero/src/votca/tools/src/tools /u/forero/src/votca/builddir /u/forero/src/votca/builddir/tools/src/tools /u/forero/src/votca/builddir/tools/src/tools/CMakeFiles/votca_property.dir/DependInfo.cmake --color= gmake[2]: Leaving directory '/cobra/u/forero/src/votca/builddir' /usr/bin/gmake -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/build gmake[2]: Entering directory '/cobra/u/forero/src/votca/builddir' [ 28%] Linking CXX executable votca_property cd /u/forero/src/votca/builddir/tools/src/tools && /u/system/soft/SLE_12/packages/x86_64/cmake/3.15.2/bin/cmake -E cmake_link_script CMakeFiles/votca_property.dir/link.txt --verbose=1 /mpcdf/soft/SLE_12/packages/x86_64/gcc/8.4.0/bin/g++ -Wall -Wextra -Wpedantic -Wshadow -Wconversion -O3 -DNDEBUG CMakeFiles/votca_property.dir/votca_property.cc.o -o votca_property -Wl,-rpath,/mpcdf/soft/SLE_12/packages/skylake/boost/intel_19.1.1-19.1.1-impi_2019.7-2019.7.217/1.66.0/lib:/mpcdf/soft/SLE_12/packages/skylake/fftw/gcc_8-8.4.0/3.3.8/lib: ../libtools/libvotca_tools.a /mpcdf/soft/SLE_12/packages/skylake/boost/intel_19.1.1-19.1.1-impi_2019.7-2019.7.217/1.66.0/lib/libboost_program_options.so /mpcdf/soft/SLE_12/packages/skylake/boost/intel_19.1.1-19.1.1-impi_2019.7-2019.7.217/1.66.0/lib/libboost_filesystem.so /mpcdf/soft/SLE_12/packages/skylake/boost/intel_19.1.1-19.1.1-impi_2019.7-2019.7.217/1.66.0/lib/libboost_system.so /usr/lib64/libexpat.so -lpthread -lm /mpcdf/soft/SLE_12/packages/skylake/fftw/gcc_8-8.4.0/3.3.8/lib/libfftw3.so /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o: in function `boost::program_options::typed_value, std::allocator >, char>::xparse(boost::any&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&) const': votca_property.cc:(.text._ZNK5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcE6xparseERNS_3anyERKSt6vectorIS7_SaIS7_EE[_ZNK5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcE6xparseERNS_3anyERKSt6vectorIS7_SaIS7_EE]+0x23): undefined reference to `boost::program_options::validate(boost::any&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&, std::__cxx11::basic_string, std::allocator >*, int)' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o: in function `boost::program_options::typed_value, std::allocator >, char>::name() const': votca_property.cc:(.text._ZNK5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcE4nameEv[_ZNK5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcE4nameEv]+0x1f): undefined reference to `boost::program_options::arg[abi:cxx11]' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o: in function `boost::program_options::typed_value::name[abi:cxx11]() const': votca_property.cc:(.text._ZNK5boost15program_options11typed_valueIlcE4nameB5cxx11Ev[_ZNK5boost15program_options11typed_valueIlcE4nameB5cxx11Ev]+0x1f): undefined reference to `boost::program_options::arg[abi:cxx11]' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o: in function `boost::program_options::validation_error::validation_error(boost::program_options::validation_error::kind_t, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, int)': votca_property.cc:(.text._ZN5boost15program_options16validation_errorC2ENS1_6kind_tERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESA_i[_ZN5boost15program_options16validation_errorC5ENS1_6kind_tERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESA_i]+0x1f): undefined reference to `boost::program_options::validation_error::get_template[abi:cxx11](boost::program_options::validation_error::kind_t)' /usr/bin/ld: votca_property.cc:(.text._ZN5boost15program_options16validation_errorC2ENS1_6kind_tERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESA_i[_ZN5boost15program_options16validation_errorC5ENS1_6kind_tERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESA_i]+0x33): undefined reference to `boost::program_options::error_with_option_name::error_with_option_name(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, int)' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o: in function `VotcaProperty::Run()': votca_property.cc:(.text._ZN13VotcaProperty3RunEv[_ZN13VotcaProperty3RunEv]+0x4a): undefined reference to `boost::program_options::abstract_variables_map::operator[](std::__cxx11::basic_string, std::allocator > const&) const' /usr/bin/ld: votca_property.cc:(.text._ZN13VotcaProperty3RunEv[_ZN13VotcaProperty3RunEv]+0x11b): undefined reference to `boost::program_options::abstract_variables_map::operator[](std::__cxx11::basic_string, std::allocator > const&) const' /usr/bin/ld: votca_property.cc:(.text._ZN13VotcaProperty3RunEv[_ZN13VotcaProperty3RunEv]+0x1d8): undefined reference to `boost::program_options::abstract_variables_map::operator[](std::__cxx11::basic_string, std::allocator > const&) const' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o: in function `void boost::program_options::validate(boost::any&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&, long*, long) [clone .constprop.186]': votca_property.cc:(.text._ZN5boost15program_options8validateIlcEEvRNS_3anyERKSt6vectorINSt7__cxx1112basic_stringIT0_St11char_traitsIS7_ESaIS7_EEESaISB_EEPT_l.constprop.186[_ZNK5boost15program_options11typed_valueIlcE6xparseERNS_3anyERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISB_EE]+0x607): undefined reference to `boost::program_options::invalid_option_value::invalid_option_value(std::__cxx11::basic_string, std::allocator > const&)' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o:(.rodata._ZTVN5boost16exception_detail19error_info_injectorINS_15program_options20invalid_option_valueEEE[_ZTVN5boost16exception_detail19error_info_injectorINS_15program_options20invalid_option_valueEEE]+0x30): undefined reference to `boost::program_options::error_with_option_name::substitute_placeholders(std::__cxx11::basic_string, std::allocator > const&) const' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o:(.rodata._ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options20invalid_option_valueEEEEE[_ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options20invalid_option_valueEEEEE]+0x38): undefined reference to `boost::program_options::error_with_option_name::substitute_placeholders(std::__cxx11::basic_string, std::allocator > const&) const' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o:(.rodata._ZTVN5boost16exception_detail19error_info_injectorINS_15program_options16validation_errorEEE[_ZTVN5boost16exception_detail19error_info_injectorINS_15program_options16validation_errorEEE]+0x30): undefined reference to `boost::program_options::error_with_option_name::substitute_placeholders(std::__cxx11::basic_string, std::allocator > const&) const' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o:(.rodata._ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options16validation_errorEEEEE[_ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options16validation_errorEEEEE]+0x38): undefined reference to `boost::program_options::error_with_option_name::substitute_placeholders(std::__cxx11::basic_string, std::allocator > const&) const' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o:(.rodata._ZTVN5boost15program_options16validation_errorE[_ZTVN5boost15program_options16validation_errorE]+0x30): undefined reference to `boost::program_options::error_with_option_name::substitute_placeholders(std::__cxx11::basic_string, std::allocator > const&) const' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o:(.rodata._ZTVN5boost15program_options20invalid_option_valueE[_ZTVN5boost15program_options20invalid_option_valueE]+0x30): more undefined references to `boost::program_options::error_with_option_name::substitute_placeholders(std::__cxx11::basic_string, std::allocator > const&) const' follow /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o:(.rodata._ZTVN5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcEE[_ZTVN5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcEE]+0x38): undefined reference to `boost::program_options::value_semantic_codecvt_helper::parse(boost::any&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&, bool) const' /usr/bin/ld: CMakeFiles/votca_property.dir/votca_property.cc.o:(.rodata._ZTVN5boost15program_options11typed_valueIlcEE[_ZTVN5boost15program_options11typed_valueIlcEE]+0x38): undefined reference to `boost::program_options::value_semantic_codecvt_helper::parse(boost::any&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&, bool) const' /usr/bin/ld: ../libtools/libvotca_tools.a(application.cc.o): in function `votca::tools::Application::AddProgramOptions(std::__cxx11::basic_string, std::allocator > const&)': application.cc:(.text+0x691): undefined reference to `boost::program_options::options_description::options_description(std::__cxx11::basic_string, std::allocator > const&, unsigned int, unsigned int)' /usr/bin/ld: ../libtools/libvotca_tools.a(application.cc.o): in function `votca::tools::Application::ShowTEXPage(std::ostream&)': application.cc:(.text+0x1753): undefined reference to `boost::program_options::option_description::format_parameter[abi:cxx11]() const' /usr/bin/ld: application.cc:(.text+0x1762): undefined reference to `boost::program_options::option_description::format_name[abi:cxx11]() const' /usr/bin/ld: application.cc:(.text+0x1985): undefined reference to `boost::program_options::option_description::description[abi:cxx11]() const' /usr/bin/ld: ../libtools/libvotca_tools.a(application.cc.o): in function `votca::tools::Application::ShowManPage(std::ostream&)': application.cc:(.text+0x1f7e): undefined reference to `boost::program_options::option_description::format_parameter[abi:cxx11]() const' /usr/bin/ld: application.cc:(.text+0x1f8d): undefined reference to `boost::program_options::option_description::format_name[abi:cxx11]() const' /usr/bin/ld: application.cc:(.text+0x218d): undefined reference to `boost::program_options::option_description::description[abi:cxx11]() const' /usr/bin/ld: ../libtools/libvotca_tools.a(application.cc.o): in function `votca::tools::Application::Application()': application.cc:(.text+0x2cde): undefined reference to `boost::program_options::options_description::options_description(std::__cxx11::basic_string, std::allocator > const&, unsigned int, unsigned int)' /usr/bin/ld: ../libtools/libvotca_tools.a(application.cc.o): in function `boost::program_options::basic_command_line_parser::extra_parser(boost::function1, std::allocator >, std::__cxx11::basic_string, std::allocator > >, std::__cxx11::basic_string, std::allocator > const&>)': application.cc:(.text._ZN5boost15program_options25basic_command_line_parserIcE12extra_parserENS_9function1ISt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESA_ERKSA_EE[_ZN5boost15program_options25basic_command_line_parserIcE12extra_parserENS_9function1ISt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESA_ERKSA_EE]+0x3e): undefined reference to `boost::program_options::detail::cmdline::set_additional_parser(boost::function1, std::allocator >, std::__cxx11::basic_string, std::allocator > >, std::__cxx11::basic_string, std::allocator > const&>)' /usr/bin/ld: ../libtools/libvotca_tools.a(application.cc.o): in function `boost::program_options::basic_command_line_parser::basic_command_line_parser(int, char const* const*)': application.cc:(.text._ZN5boost15program_options25basic_command_line_parserIcEC2EiPKPKc[_ZN5boost15program_options25basic_command_line_parserIcEC5EiPKPKc]+0x1b8): undefined reference to `boost::program_options::to_internal(std::__cxx11::basic_string, std::allocator > const&)' /usr/bin/ld: application.cc:(.text._ZN5boost15program_options25basic_command_line_parserIcEC2EiPKPKc[_ZN5boost15program_options25basic_command_line_parserIcEC5EiPKPKc]+0x277): undefined reference to `boost::program_options::detail::cmdline::cmdline(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)' collect2: error: ld returned 1 exit status tools/src/tools/CMakeFiles/votca_property.dir/build.make:89: recipe for target 'tools/src/tools/votca_property' failed gmake[2]: *** [tools/src/tools/votca_property] Error 1 gmake[2]: Leaving directory '/cobra/u/forero/src/votca/builddir' CMakeFiles/Makefile2:317: recipe for target 'tools/src/tools/CMakeFiles/votca_property.dir/all' failed gmake[1]: *** [tools/src/tools/CMakeFiles/votca_property.dir/all] Error 2 gmake[1]: Leaving directory '/cobra/u/forero/src/votca/builddir' Makefile:129: recipe for target 'all' failed gmake: *** [all] Error 2