Found local metadata for r-3.6.2 Using cached file /home/martin/sage-develop/upstream/R-3.6.2.tar.gz r-3.6.2 ==================================================== Setting up build directory for r-3.6.2 Finished extraction Applying patches from ../patches... Applying ../patches/autoconf_verb_dash.patch patching file configure Hunk #1 succeeded at 24966 with fuzz 2 (offset 129 lines). Hunk #2 succeeded at 25323 (offset 130 lines). Applying ../patches/cygwin_build_support.patch patching file configure Hunk #1 succeeded at 27637 (offset -86 lines). Hunk #2 succeeded at 27879 (offset -117 lines). Hunk #3 succeeded at 27892 (offset -117 lines). Hunk #4 succeeded at 27905 (offset -117 lines). patching file configure.ac Hunk #1 succeeded at 1280 (offset -14 lines). Hunk #2 succeeded at 1537 (offset -14 lines). Hunk #3 succeeded at 1549 (offset -14 lines). Hunk #4 succeeded at 1561 (offset -14 lines). patching file src/library/tools/R/install.R Hunk #1 succeeded at 1215 (offset 374 lines). Applying ../patches/hardcoded_dirs.patch patching file src/scripts/Makefile.in Hunk #1 succeeded at 87 (offset -2 lines). patching file src/scripts/R.sh.in Applying ../patches/libcurl_https_support.patch patching file configure Hunk #1 succeeded at 42943 (offset 1874 lines). Hunk #2 succeeded at 42952 (offset 1874 lines). patching file m4/R.m4 Hunk #1 succeeded at 4181 (offset -24 lines). Applying ../patches/link_all_shared_libs.patch patching file etc/Makeconf.in Hunk #1 succeeded at 159 with fuzz 2 (offset 9 lines). Applying ../patches/m4_macro_bug.patch patching file configure Hunk #1 succeeded at 42543 (offset 1744 lines). Hunk #2 succeeded at 42587 with fuzz 2 (offset 1744 lines). patching file m4/R.m4 Hunk #1 succeeded at 3100 (offset -90 lines). Hunk #2 succeeded at 3122 with fuzz 2 (offset -90 lines). Applying ../patches/rcmd_exec.patch patching file src/scripts/Rcmd.in **************************************************** Host system: Linux Martin-Laptop 4.15.0-74-generic #84-Ubuntu SMP Thu Dec 19 08:06:28 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/7/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 7.4.0-1ubuntu1~18.04.1' --with-bugurl=file:///usr/share/doc/gcc-7/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --prefix=/usr --with-gcc-major-version-only --program-suffix=-7 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --enable-default-pie --with-system-zlib --with-target-system-zlib --enable-objc-gc=auto --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 7.4.0 (Ubuntu 7.4.0-1ubuntu1~18.04.1) **************************************************** Package 'r' is currently not installed No legacy uninstaller found for 'r'; nothing to do R_CONFIGURE_BLAS=--with-blas=-L/home/martin/sage-develop/local/lib -lopenblas R_CONFIGURE_LAPACK=--with-lapack=-L/home/martin/sage-develop/local/lib -lopenblas checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /bin/sed checking for which... /usr/bin/which checking for less... /usr/bin/less checking for gtar... no checking for gnutar... no checking for tar... /bin/tar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 5.1... yes checking for ginstall-info... /usr/bin/ginstall-info checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... found zi4.sty checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for gzip... /bin/gzip checking for bzip2... /home/martin/sage-develop/local/bin/bzip2 checking for firefox... /usr/bin/firefox using default browser ... /usr/bin/firefox checking for acroread... no checking for acroread4... no checking for xdg-open... /usr/bin/xdg-open checking for working aclocal... found checking for working autoconf... found checking for working autoheader... found checking for bison... bison -y checking for notangle... false checking for realpath... /usr/bin/realpath checking for pkg-config... /usr/bin/pkg-config checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking whether gcc needs -traditional... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking how to run the C preprocessor... gcc -E looking for a modern Fortran compiler checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking whether g++ -std=gnu++11 -g -O2 can compile C++ code... yes checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking whether __attribute__((visibility())) is supported... yes checking whether gcc accepts -fvisibility... yes checking whether g++ -std=gnu++11 accepts -fvisibility... yes checking whether gfortran accepts -fvisibility... yes checking for gcc... gcc checking whether we are using the GNU Objective C compiler... no checking whether gcc accepts -g... no checking whether g++ -std=gnu++11 can compile ObjC++... no checking whether can compile ObjC++... no checking for Objective C++ compiler... no working ObjC++ compiler found checking how to print strings... printf checking for a sed that does not truncate output... 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(cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/bash configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands R is now configured for x86_64-pc-linux-gnu Source directory: . Installation directory: /home/martin/sage-develop/local C compiler: gcc -g -O2 Fortran fixed-form compiler: gfortran -fno-optimize-sibling-calls -g -O2 Default C++ compiler: g++ -std=gnu++11 -std=gnu++11 -g -O2 C++98 compiler: g++ -std=gnu++11 -std=gnu++98 -g -O2 C++11 compiler: g++ -std=gnu++11 -std=gnu++11 -g -O2 C++14 compiler: g++ -std=gnu++11 -std=gnu++14 -g -O2 C++17 compiler: g++ -std=gnu++11 -std=gnu++17 -g -O2 Fortran free-form compiler: gfortran -fno-optimize-sibling-calls -g -O2 Obj-C compiler: Interfaces supported: External libraries: readline, BLAS(OpenBLAS), LAPACK(generic), curl Additional capabilities: PNG, NLS, cairo, ICU Options enabled: shared R library, R profiling Capabilities skipped: JPEG, TIFF Options not enabled: shared BLAS, memory profiling Recommended packages: yes make[4]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src' make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/m4' make[5]: Nothing to be done for 'R'. make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/m4' make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/tools' make[5]: Nothing to be done for 'R'. make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/tools' make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/doc' make[6]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/doc/html' make[6]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/doc/html' make[6]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/doc/manual' make[6]: Nothing to be done for 'R'. make[6]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/doc/manual' make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/doc' make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/etc' make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/etc' make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/share' make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/share' make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src' make[6]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/scripts' creating src/scripts/R.fe make[7]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/scripts' mkdir -p -- ../../bin make[7]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/scripts' make[6]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/scripts' make[6]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/include' mkdir -p -- ../../include make[7]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[7]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/include/R_ext' make[6]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/include' make[6]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/extra' make[7]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/extra/tre' make[8]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/extra/tre' making regcomp.d from regcomp.c making regerror.d from regerror.c making regexec.d from regexec.c making tre-ast.d from tre-ast.c making tre-compile.d from tre-compile.c making tre-match-approx.d from tre-match-approx.c making tre-match-backtrack.d from tre-match-backtrack.c making tre-match-parallel.d from tre-match-parallel.c making tre-mem.d from tre-mem.c making tre-parse.d from tre-parse.c making tre-stack.d from tre-stack.c making xmalloc.d from xmalloc.c make[8]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/extra/tre' make[8]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/extra/tre' gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c regcomp.c -o regcomp.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c regerror.c -o regerror.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c regexec.c -o regexec.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-ast.c -o tre-ast.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-compile.c -o tre-compile.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-mem.c -o tre-mem.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-parse.c -o tre-parse.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-stack.c -o tre-stack.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c xmalloc.c -o xmalloc.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o ranlib libtre.a make[8]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/extra/tre' make[7]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/extra/tre' make[6]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/extra' make[6]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[7]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/appl' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c integrate.c -o integrate.o In file included from ../../src/include/R_ext/Applic.h:41:0, from integrate.c:33: ../../src/include/R_ext/BLAS.h:103:55: error: expected declaration specifiers or '...' before ')' token const double *beta, double *y, const int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:110:35: error: expected declaration specifiers or '...' before ')' token double *y, const int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:117:55: error: expected declaration specifiers or '...' before ')' token const double *beta, double *y, const int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:124:55: error: expected declaration specifiers or '...' before ')' token const double *beta, double *y, const int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:132:55: error: expected declaration specifiers or '...' before ')' token const double *beta, double *y, const int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:139:36: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:139:42: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:139:47: error: expected declaration specifiers or '...' before ')' token double *x, const int *incx FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:145:36: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:145:42: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:145:47: error: expected declaration specifiers or '...' before ')' token double *x, const int *incx FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:151:36: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:151:42: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:151:47: error: expected declaration specifiers or '...' before ')' token double *x, const int *incx FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:158:36: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:158:42: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:158:47: error: expected declaration specifiers or '...' before ')' token double *x, const int *incx FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:165:9: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:165:15: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:165:20: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:172:36: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:172:42: note: in expansion of macro 'FCLEN' double *x, const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:172:47: error: expected declaration specifiers or '...' before ')' token double *x, const int *incx FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:183:40: error: expected declaration specifiers or '...' before ')' token double *a, const int *lda FCLEN); ^ ../../src/include/R_ext/BLAS.h:187:59: error: expected declaration specifiers or '...' before ')' token const double *x, const int *incx, double *ap FCLEN); ^ ../../src/include/R_ext/BLAS.h:194:34: error: expected declaration specifiers or '...' before ')' token double *a, const int *lda FCLEN); ^ ../../src/include/R_ext/BLAS.h:200:53: error: expected declaration specifiers or '...' before ')' token const double *y, const int *incy, double *ap FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:212:9: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:212:14: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:221:9: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:221:15: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:221:21: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:221:26: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:229:9: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:229:15: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:229:21: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:229:26: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:238:9: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:238:14: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:246:9: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:246:14: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:256:10: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:256:15: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:304:22: error: expected declaration specifiers or '...' before ')' token int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:311:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:311:18: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:316:41: error: expected declaration specifiers or '...' before ')' token Rcomplex *y, const int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:329:41: error: expected declaration specifiers or '...' before ')' token Rcomplex *y, const int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:335:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:335:18: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:340:41: error: expected declaration specifiers or '...' before ')' token Rcomplex *y, const int *incy FCLEN); ^ ../../src/include/R_ext/BLAS.h:344:26: error: expected declaration specifiers or '...' before ')' token const int *lda FCLEN); ^ ../../src/include/R_ext/BLAS.h:348:57: error: expected declaration specifiers or '...' before ')' token const int *incy, Rcomplex *a, const int *lda FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:354:14: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:354:19: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:359:28: note: in expansion of macro 'FCLEN' const int *ldc FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:359:33: error: expected declaration specifiers or '...' before ')' token const int *ldc FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:364:12: error: expected declaration specifiers or '...' before ')' token FCLEN); ^ ../../src/include/R_ext/BLAS.h:368:11: error: expected declaration specifiers or '...' before ')' token FCLEN); ^ ../../src/include/R_ext/BLAS.h:372:42: error: expected declaration specifiers or '...' before ')' token const int *incy, Rcomplex *ap FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:387:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:387:18: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:392:14: note: in expansion of macro 'FCLEN' FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:392:19: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:397:28: note: in expansion of macro 'FCLEN' const int *ldc FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:397:33: error: expected declaration specifiers or '...' before ')' token const int *ldc FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:402:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:402:19: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:402:24: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:407:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:407:19: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:407:24: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:411:29: note: in expansion of macro 'FCLEN' const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:411:35: note: in expansion of macro 'FCLEN' const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:411:40: error: expected declaration specifiers or '...' before ')' token const int *incx FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:415:29: note: in expansion of macro 'FCLEN' const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:415:35: note: in expansion of macro 'FCLEN' const int *incx FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:415:40: error: expected declaration specifiers or '...' before ')' token const int *incx FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:421:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:421:19: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:421:25: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:421:30: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:426:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:426:19: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:426:24: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:431:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:431:19: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:431:25: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:431:30: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN FCLEN); ^ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:436:13: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration specifiers or '...' before ',' token # define FCLEN ,FC_LEN_T ^ ../../src/include/R_ext/BLAS.h:436:19: note: in expansion of macro 'FCLEN' FCLEN FCLEN FCLEN); ^~~~~ ../../src/include/R_ext/BLAS.h:436:24: error: expected declaration specifiers or '...' before ')' token FCLEN FCLEN FCLEN); ^ ../../Makeconf:124: recipe for target 'integrate.o' failed make[7]: *** [integrate.o] Error 1 make[7]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/appl' Makefile:47: recipe for target 'R' failed make[6]: *** [R] Error 2 make[6]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src/appl' Makefile:28: recipe for target 'R' failed make[5]: *** [R] Error 1 make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src/src' Makefile:60: recipe for target 'R' failed make[4]: *** [R] Error 1 make[4]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2/src' Error building R. real 3m11.960s user 2m2.929s sys 1m10.020s ************************************************************************ Error installing package r-3.6.2 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /home/martin/sage-develop/logs/pkgs/r-3.6.2.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/martin/sage-develop/local/var/tmp/sage/build/r-3.6.2' && '/home/martin/sage-develop/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************