Input file paths
Mapping filepath: /home/qiime/Desktop/Shared_Folder/Sachia/MESOAQUA/mapping_files/validate_mapping_file_output/mappingfile_MESOAQUA_DNA_new_corrected.txt (md5: f9cddcc5a0c14da6c318c3b6bcd2f1bf)
Sequence read filepath: /home/qiime/Desktop/Shared_Folder/Sachia/MESOAQUA/barcode_trim/third_trim_stitched_reads_DNA/reads_DNA.fastq (md5: 2a46aefda261d6ba49632cf1a47150ed)
Barcode read filepath: /home/qiime/Desktop/Shared_Folder/Sachia/MESOAQUA/barcode_trim/second_trim_stitched_reads_DNA/barcodes_combined_DNA.fastq (md5: c3a1ba89129c1452d2108e5a546f9dbd)

Quality filter results
Total number of input sequences: 5360574
Barcode not in mapping file: 4791072
Read too short after quality truncation: 4106
Count of N characters exceeds limit: 377
Illumina quality digit = 0: 0
Barcode errors exceed max: 0

Result summary (after quality filtering)
Median sequence length: 252.00
MD25.7	15459
MD17.3	13697
MD25.5	13185
MD25.10	12693
MD21.10	12223
MD21.6	10611
MD25.9	10423
MD3.12	9676
MD3.10	8979
MD25.1	8975
MD21.9	8794
MD17.12	8794
MD25.2	8500
MD25.6	8339
MD10.3	8224
MD10.6	8127
MD10.7	8060
MD25.8	8025
MD10.10	7864
MD17.6	7852
MD25.11	7768
MD25.4	7704
MD21.1	7558
MD3.8	7553
MD0.10	7504
MD10.1	7495
MD0.7	7446
MD3.6	7414
MD10.2	7399
MD5.10	7387
MD10.8	7372
MD21.3	7230
MD0.5	7223
MD10.12	7218
MD21.5	7149
MD21.12	7120
MD21.11	7026
MD21.4	6945
MD0.11	6942
MD10.4	6910
MD3.11	6889
MD3.3	6817
MD3.5	6767
MD21.7	6711
MD10.11	6567
MD3.7	6557
MD21.2	6532
MD10.9	6439
MD0.3	6406
MD3.9	6317
MD21.8	6245
MD5.12	5957
MD0.1	5954
MD10.5	5770
MD5.3	5715
MD0.4	5688
MD3.1	5587
MD0.8	5508
MD5.1	5458
MD0.12	5408
MD0.2	5392
MD3.4	5337
MD17.10	5289
MD17.4	5040
MD5.2	4879
MD3.2	4759
MD5.7	4757
MD5.5	4742
MD5.4	4735
MD0.9	4586
MD0.6	4421
MD17.11	4183
MD25.12	3977
MD17.9	3809
MD17.1	3735
MD17.8	3619
MD17.2	3292
MD5.9	3261
MD5.8	3121
MD5.6	2938
MD17.5	2933
MD25.3	2875
MD5.11	2798
MD17.7	2386

Total number seqs written	565019
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