UclustConsensusTaxonAssigner parameters: id_to_taxonomy_filepath:/home/r01ap14/Desktop/LastTax3.txt id_to_taxonomy_fp:/home/r01ap14/Desktop/LastTax3.txt max_accepts:3 min_consensus_fraction:0.51 reference_sequences_fp:/home/r01ap14/Desktop/DBsingles.fasta similarity:0.8 unassignable_label:Unassigned Result path: /tmp/assign-taxp9YHmW .uc file contents: # uclust.real --input rep_set.fna --id 0.8 --rev --maxaccepts 3 --allhits --libonly --lib /home/r01ap14/Desktop/DBsingles.fasta --uc /tmp/UclustConsensusTaxonAssigner_5o60VJ.uc # version=1.2.22 # Tab-separated fields: # 1=Type, 2=ClusterNr, 3=SeqLength or ClusterSize, 4=PctId, 5=Strand, 6=QueryStart, 7=SeedStart, 8=Alignment, 9=QueryLabel, 10=TargetLabel # Record types (field 1): L=LibSeed, S=NewSeed, H=Hit, R=Reject, D=LibCluster, C=NewCluster, N=NoHit # For C and D types, PctId is average id with seed. # QueryStart and SeedStart are zero-based relative to start of sequence. # If minus strand, SeedStart is relative to reverse-complemented seed. N * 269 * * * * * denovo0 ITSPS35_3426 * N * 226 * * * * * denovo1 ITSPS35_2409 * N * 183 * * * * * denovo10 ITSPS35_15984 * N * 193 * * * * * denovo100 ITSPS35_2625 * N * 296 * * * * * denovo1000 ITSPS35_605 * N * 193 * * * * * denovo1001 ITSPS35_15522 * N * 277 * * * * * denovo1002 ITSPS35_609 * N * 163 * * * * * denovo1003 ITSPS35_4299 * N * 298 * * * * * denovo1004 ITSPS35_9016 * N * 290 * * * * * denovo1005 ITSPS35_5918 * N * 323 * * * * * denovo1006 ITSPS35_8516 * N * 254 * * * * * denovo1007 ITSPS35_8047 * N * 284 * * * * * denovo1008 ITSPS35_7249 * N * 269 * * * * * denovo1009 ITSPS35_690 * N * 164 * * * * * denovo101 ITSPS35_11906 * N * 401 * * * * * denovo1010 ITSPS35_8963 * N * 523 * * * * * denovo1011 BTPS35_15224 * N * 363 * * * * * denovo1012 ITSPS35_15326 * N * 172 * * * * * denovo1013 ITSPS35_10132 * N * 262 * * * * * denovo1014 ITSPS35_14108 * N * 167 * * * * * denovo1015 ITSPS35_168 * N * 217 * * * * * denovo1016 ITSPS35_7084 * L 756 1197 * * * * * KJ755195_1_Phytophthora_taxon_Pgchlamydo_voucher_IMI389731_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_and_5_8S_ribosomal_RNA_gene_complete_sequence_and_internal_transcribed_spacer_2_partial_sequence * H 756 290 100.0 + 0 0 346I40MI250M560I denovo1017 ITSPS35_4893 KJ755195_1_Phytophthora_taxon_Pgchlamydo_voucher_IMI389731_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_and_5_8S_ribosomal_RNA_gene_complete_sequence_and_internal_transcribed_spacer_2_partial_sequence L 2923 845 * * * * * PHYTOPHTHORA_GONAPODYIDES_CBS_117380_ITS * H 2923 290 97.6 + 0 0 D39MI167MD82M556I denovo1017 ITSPS35_4893 PHYTOPHTHORA_GONAPODYIDES_CBS_117380_ITS N * 181 * * * * * denovo1018 ITSPS35_16227 * N * 226 * * * * * denovo1019 ITSPS35_5261 * N * 179 * * * * * denovo102 ITSPS35_2623 * N * 252 * * * * * denovo1020 BTPS35_16577 * N * 173 * * * * * denovo1021 ITSPS35_16223 * N * 340 * * * * * denovo1022 ITSPS35_5265 * N * 162 * * * * * denovo1023 ITSPS35_1204 * N * 190 * * * * * denovo1024 ITSPS35_15475 * N * 183 * * * * * denovo1025 ITSPS35_16229 * N * 291 * * * * * denovo1026 ITSPS35_8123 * N * 397 * * * * * denovo1027 ITSPS35_2574 * N * 234 * * * * * denovo1028 ITSPS35_6701 * N * 313 * * * * * denovo1029 ITSPS35_7504 * N * 196 * * * * * denovo103 ITSPS35_2190 * N * 296 * * * * * denovo1030 ITSPS35_4202 * N * 374 * * * * * denovo1031 ITSPS35_11382 * N * 202 * * * * * denovo1032 ITSPS35_13561 * N * 397 * * * * * denovo1033 ITSPS35_5189 * N * 148 * * * * * denovo1034 ITSPS35_10637 * N * 186 * * * * * denovo1035 ITSPS35_2775 * N * 409 * * * * * denovo1036 ITSPS35_2671 * L 770 3910 * * * * * AY598708_2_Phytophthora_undulata_strain_CBS_157_69_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 770 227 95.2 + 0 0 1765I42M4D181M1922I denovo1037 ITSPS35_12583 AY598708_2_Phytophthora_undulata_strain_CBS_157_69_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1658 3913 * * * * * HQ643773_2_Pythium_senticosum_voucher_CBS122490_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1658 227 93.0 + 0 0 1762I42M4D97MI84M1927I denovo1037 ITSPS35_12583 HQ643773_2_Pythium_senticosum_voucher_CBS122490_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1474 4060 * * * * * AY598650_3_Pythium_anandrum_strain_CBS_285_31_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1474 227 93.8 + 0 0 1770I50M3D76MI14MI84M2064I denovo1037 ITSPS35_12583 AY598650_3_Pythium_anandrum_strain_CBS_285_31_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 189 * * * * * denovo1038 ITSPS35_769 * N * 195 * * * * * denovo1039 ITSPS35_16422 * N * 317 * * * * * denovo104 ITSPS35_13088 * N * 232 * * * * * denovo1040 ITSPS35_14409 * N * 230 * * * * * denovo1041 ITSPS35_16134 * N * 214 * * * * * denovo1042 ITSPS35_1027 * N * 211 * * * * * denovo1043 ITSPS35_16429 * N * 175 * * * * * denovo1044 ITSPS35_13968 * N * 231 * * * * * denovo1045 ITSPS35_1851 * N * 198 * * * * * denovo1046 ITSPS35_8637 * N * 229 * * * * * denovo1047 ITSPS35_1853 * N * 227 * * * * * denovo1048 ITSPS35_11605 * N * 191 * * * * * denovo1049 ITSPS35_12866 * N * 222 * * * * * denovo105 ITSPS35_5292 * N * 263 * * * * * denovo1050 ITSPS35_11700 * N * 212 * * * * * denovo1051 ITSPS35_9239 * N * 231 * * * * * denovo1052 ITSPS35_12909 * N * 381 * * * * * denovo1053 ITSPS35_12861 * N * 193 * * * * * denovo1054 ITSPS35_4198 * L 1650 4057 * * * * * AY598630_2_Pythium_salpingophorum_strain_CBS_471_50_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1650 234 81.2 + 0 0 1762I39MI41M9D39M18I106M2051I denovo1055 ITSPS35_2732 AY598630_2_Pythium_salpingophorum_strain_CBS_471_50_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1521 4062 * * * * * AY598629_2_Pythium_conidiophorum_strain_CBS_223_88_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1521 234 80.8 + 0 0 1765I39MI41M9D39M18I106M2053I denovo1055 ITSPS35_2732 AY598629_2_Pythium_conidiophorum_strain_CBS_223_88_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 336 * * * * * denovo1056 ITSPS35_9230 * N * 165 * * * * * denovo1057 ITSPS35_16206 * N * 198 * * * * * denovo1058 ITSPS35_1105 * N * 307 * * * * * denovo1059 ITSPS35_6471 * N * 255 * * * * * denovo106 ITSPS35_10614 * N * 403 * * * * * denovo1060 ITSPS35_2315 * N * 241 * * * * * denovo1061 ITSPS35_14379 * N * 213 * * * * * denovo1062 ITSPS35_2253 * L 1541 4045 * * * * * AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1541 243 92.6 + 0 0 1760I39M2D21M4D177M2048I denovo1063 ITSPS35_7547 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1520 4049 * * * * * AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1520 243 93.0 + 0 0 1764I36MD25M4D177M2047I denovo1063 ITSPS35_7547 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 226 * * * * * denovo1064 ITSPS35_10862 * N * 353 * * * * * denovo1065 BTPS35_12 * L 1738 4112 * * * * * HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1738 286 88.5 + 0 0 1769I72M13I214M2044I denovo1066 ITSPS35_6502 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 415 * * * * * denovo1067 ITSPS35_12760 * N * 256 * * * * * denovo1068 ITSPS35_834 * N * 310 * * * * * denovo1069 ITSPS35_2492 * N * 191 * * * * * denovo107 ITSPS35_591 * H 1738 299 100.0 + 0 0 1769I299M2044I denovo1070 ITSPS35_140 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 269 * * * * * denovo1071 ITSPS35_9807 * N * 198 * * * * * denovo1072 ITSPS35_12886 * N * 195 * * * * * denovo1073 ITSPS35_3228 * N * 319 * * * * * denovo1074 ITSPS35_3229 * L 1742 3931 * * * * * HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1742 170 86.5 + 0 0 1761I32M98I18M3I25M23I16M2I5M6I74M1868I denovo1075 ITSPS35_11027 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1736 4094 * * * * * HQ643373_2_Phytopythium_carbonicum_voucher_CBS112544_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1736 170 81.2 + 0 0 1768I32M89I12M25I19M33I26M3I8M4I31MD41M2003I denovo1075 ITSPS35_11027 HQ643373_2_Phytopythium_carbonicum_voucher_CBS112544_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 3780 4133 * * * * * HQ643761_2_Pythium_rostratifingens_voucher_CBS115464_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 3780 170 82.4 + 0 0 1763I32M58I5M103I15MI15M27I12MI17M6I32M2D40M2006I denovo1075 ITSPS35_11027 HQ643761_2_Pythium_rostratifingens_voucher_CBS115464_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 279 * * * * * denovo1076 ITSPS35_16720 * H 1541 232 91.4 + 0 0 1760I32MD31M6I168M2048I denovo1077 ITSPS35_16045 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1520 232 91.4 + 0 0 1764I64M6I168M2047I denovo1077 ITSPS35_16045 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1621 3905 * * * * * HQ643739_2_Pythium_pectinolyticum_voucher_CBS122643_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1621 232 88.8 + 0 0 1758I41M2D21M6I17M2D149M1913I denovo1077 ITSPS35_16045 HQ643739_2_Pythium_pectinolyticum_voucher_CBS122643_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1541 236 96.6 + 0 0 1760I39MI197M2048I denovo1078 ITSPS35_1582 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1520 236 96.2 + 0 0 1764I45M2I191M2047I denovo1078 ITSPS35_1582 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1621 236 93.6 + 0 0 1758I86M2D148M1913I denovo1078 ITSPS35_1582 HQ643739_2_Pythium_pectinolyticum_voucher_CBS122643_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 179 * * * * * denovo1079 ITSPS35_4849 * N * 190 * * * * * denovo108 ITSPS35_11597 * N * 284 * * * * * denovo1080 ITSPS35_16041 * N * 222 * * * * * denovo1081 ITSPS35_3315 * N * 197 * * * * * denovo1082 ITSPS35_11884 * N * 281 * * * * * denovo1083 ITSPS35_6017 * N * 218 * * * * * denovo1084 ITSPS35_5680 * N * 199 * * * * * denovo1085 ITSPS35_6012 * N * 353 * * * * * denovo1086 BTPS35_7507 * N * 235 * * * * * denovo1087 ITSPS35_5981 * N * 225 * * * * * denovo1088 ITSPS35_11146 * N * 273 * * * * * denovo109 ITSPS35_2580 * N * 224 * * * * * denovo11 ITSPS35_9169 * N * 178 * * * * * denovo110 ITSPS35_11614 * L 2721 627 * * * * * trnm_P_europea_P10324_A57 * H 2721 346 95.1 + 0 0 22I110MD91M3D105M12I36M251I denovo111 trnMPS35_10636 trnm_P_europea_P10324_A57 L 2722 626 * * * * * trnm_P_europea_P10325_A58 * H 2722 346 95.1 + 0 0 21I110MD91M3D105M12I36M251I denovo111 trnMPS35_10636 trnm_P_europea_P10325_A58 L 2723 627 * * * * * trnm_P_europea_P10326_A59 * H 2723 346 95.1 + 0 0 22I110MD91M3D105M12I36M251I denovo111 trnMPS35_10636 trnm_P_europea_P10326_A59 N * 229 * * * * * denovo112 ITSPS35_3610 * N * 333 * * * * * denovo113 ITSPS35_2826 * N * 233 * * * * * denovo114 ITSPS35_1147 * N * 279 * * * * * denovo115 ITSPS35_9291 * N * 200 * * * * * denovo116 ITSPS35_4866 * N * 241 * * * * * denovo117 ITSPS35_12934 * H 1742 277 92.8 + 0 0 1761I37M27I17M2D221M1868I denovo118 ITSPS35_16003 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1734 814 * * * * * HQ643954_1_Pythium_vexans_voucher_Lev3100_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1734 277 83.4 + 0 0 2D24M2D26M2D221M543I denovo118 ITSPS35_16003 HQ643954_1_Pythium_vexans_voucher_Lev3100_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 877 792 * * * * * GU133572_1_Pythium_vexans_strain_CBS119_80_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence * H 877 277 83.8 + 0 0 2D24M2D26M2D221M521I denovo118 ITSPS35_16003 GU133572_1_Pythium_vexans_strain_CBS119_80_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence N * 190 * * * * * denovo119 ITSPS35_12936 * N * 146 * * * * * denovo12 ITSPS35_15147 * N * 159 * * * * * denovo120 ITSPS35_12930 * N * 226 * * * * * denovo121 ITSPS35_9753 * N * 227 * * * * * denovo122 ITSPS35_12547 * H 1541 242 91.3 + 0 0 1760I31M6D24MI181M2048I denovo123 ITSPS35_1116 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1520 242 90.5 + 0 0 1764I31MD27M3D180M2047I denovo123 ITSPS35_1116 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 387 * * * * * denovo124 ITSPS35_9755 * N * 418 * * * * * denovo125 trnMPS35_5690 * N * 320 * * * * * denovo126 ITSPS35_9196 * N * 223 * * * * * denovo127 ITSPS35_9090 * N * 297 * * * * * denovo128 ITSPS35_13040 * N * 208 * * * * * denovo129 ITSPS35_10028 * N * 377 * * * * * denovo13 ITSPS35_4635 * N * 201 * * * * * denovo130 ITSPS35_15991 * N * 223 * * * * * denovo131 ITSPS35_12397 * N * 225 * * * * * denovo132 ITSPS35_1561 * N * 282 * * * * * denovo133 ITSPS35_3661 * N * 276 * * * * * denovo134 ITSPS35_11621 * N * 236 * * * * * denovo135 ITSPS35_6284 * N * 179 * * * * * denovo136 ITSPS35_3668 * N * 302 * * * * * denovo137 ITSPS35_13219 * N * 246 * * * * * denovo138 ITSPS35_5040 * N * 228 * * * * * denovo139 ITSPS35_6885 * N * 307 * * * * * denovo14 ITSPS35_267 * N * 200 * * * * * denovo140 ITSPS35_869 * N * 322 * * * * * denovo141 ITSPS35_3460 * N * 354 * * * * * denovo142 ITSPS35_1914 * N * 247 * * * * * denovo143 ITSPS35_12754 * N * 302 * * * * * denovo144 ITSPS35_3507 * N * 229 * * * * * denovo145 ITSPS35_861 * N * 162 * * * * * denovo146 ITSPS35_12751 * N * 197 * * * * * denovo147 ITSPS35_6495 * N * 284 * * * * * denovo148 ITSPS35_2992 * N * 196 * * * * * denovo149 ITSPS35_15066 * N * 226 * * * * * denovo15 ITSPS35_467 * N * 265 * * * * * denovo150 ITSPS35_11114 * N * 230 * * * * * denovo151 ITSPS35_376 * N * 282 * * * * * denovo152 ITSPS35_5657 * N * 183 * * * * * denovo153 ITSPS35_3644 * N * 324 * * * * * denovo154 ITSPS35_9108 * N * 177 * * * * * denovo155 ITSPS35_12109 * N * 381 * * * * * denovo156 ITSPS35_2307 * N * 255 * * * * * denovo157 ITSPS35_1965 * N * 523 * * * * * denovo158 BTPS35_127 * N * 209 * * * * * denovo159 ITSPS35_11835 * N * 506 * * * * * denovo16 ITSPS35_5770 * N * 238 * * * * * denovo160 ITSPS35_5160 * L 2386 831 * * * * * PD_02697_ITS_Phytophthora_cryptogea * H 2386 224 88.8 + 0 0 26I5M2D26MI191M582I denovo161 ITSPS35_15667 PD_02697_ITS_Phytophthora_cryptogea L 2389 827 * * * * * PD_00498_ITS_Phytophthora_drechsleri * H 2389 224 88.4 + 0 0 24I5M2D26MI191M580I denovo161 ITSPS35_15667 PD_00498_ITS_Phytophthora_drechsleri L 2390 828 * * * * * PD_00469_ITS_Phytophthora_drechsleri * H 2390 224 88.4 + 0 0 25I5M2D26MI191M580I denovo161 ITSPS35_15667 PD_00469_ITS_Phytophthora_drechsleri N * 234 * * * * * denovo162 ITSPS35_224 * N * 220 * * * * * denovo163 ITSPS35_227 * H 1738 261 95.4 + 0 0 1769I231M38I30M2044I denovo164 ITSPS35_221 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 184 * * * * * denovo165 ITSPS35_11520 * N * 398 * * * * * denovo166 ITSPS35_4690 * N * 375 * * * * * denovo167 ITSPS35_9537 * N * 250 * * * * * denovo168 ITSPS35_6859 * N * 213 * * * * * denovo169 ITSPS35_11836 * N * 180 * * * * * denovo17 ITSPS35_2260 * N * 282 * * * * * denovo170 ITSPS35_5305 * N * 200 * * * * * denovo171 ITSPS35_5307 * N * 353 * * * * * denovo172 BTPS35_1529 * N * 242 * * * * * denovo173 ITSPS35_15817 * N * 202 * * * * * denovo174 ITSPS35_3165 * N * 227 * * * * * denovo175 ITSPS35_8701 * N * 159 * * * * * denovo176 ITSPS35_15811 * N * 274 * * * * * denovo177 ITSPS35_12114 * N * 206 * * * * * denovo178 ITSPS35_10015 * N * 230 * * * * * denovo179 ITSPS35_11849 * N * 216 * * * * * denovo18 ITSPS35_14938 * N * 353 * * * * * denovo180 ITSPS35_8850 * N * 374 * * * * * denovo181 ITSPS35_15076 * N * 243 * * * * * denovo182 ITSPS35_8856 * N * 247 * * * * * denovo183 ITSPS35_7838 * N * 396 * * * * * denovo184 ITSPS35_10535 * N * 220 * * * * * denovo185 ITSPS35_9252 * N * 523 * * * * * denovo186 BTPS35_14185 * N * 191 * * * * * denovo187 ITSPS35_3762 * N * 230 * * * * * denovo188 ITSPS35_2795 * N * 154 * * * * * denovo189 ITSPS35_87 * N * 193 * * * * * denovo19 ITSPS35_308 * N * 269 * * * * * denovo190 ITSPS35_15200 * H 1742 302 100.0 + 0 0 1761I302M1868I denovo191 ITSPS35_82 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1527 905 * * * * * HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1527 302 95.4 + 0 0 D39MI65MI72M3D22M4I100M601I denovo191 ITSPS35_82 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 179 * * * * * denovo192 ITSPS35_356 * N * 272 * * * * * denovo193 ITSPS35_4741 * N * 178 * * * * * denovo194 ITSPS35_9597 * N * 307 * * * * * denovo195 ITSPS35_5362 * N * 223 * * * * * denovo196 ITSPS35_10229 * N * 267 * * * * * denovo197 ITSPS35_296 * N * 192 * * * * * denovo198 ITSPS35_6403 * N * 227 * * * * * denovo199 ITSPS35_7186 * N * 222 * * * * * denovo2 ITSPS35_8091 * N * 436 * * * * * denovo20 ITSPS35_5002 * N * 189 * * * * * denovo200 ITSPS35_8326 * N * 225 * * * * * denovo201 ITSPS35_14623 * N * 208 * * * * * denovo202 ITSPS35_459 * N * 290 * * * * * denovo203 ITSPS35_14620 * N * 220 * * * * * denovo204 ITSPS35_2968 * N * 224 * * * * * denovo205 ITSPS35_456 * N * 288 * * * * * denovo206 ITSPS35_2844 * N * 394 * * * * * denovo207 BTPS35_2107 * N * 259 * * * * * denovo208 ITSPS35_2230 * N * 496 * * * * * denovo209 BTPS35_6830 * N * 296 * * * * * denovo21 ITSPS35_1039 * N * 256 * * * * * denovo210 ITSPS35_11930 * N * 222 * * * * * denovo211 ITSPS35_4112 * N * 336 * * * * * denovo212 ITSPS35_11627 * N * 165 * * * * * denovo213 ITSPS35_61 * N * 270 * * * * * denovo214 BTPS35_13685 * N * 270 * * * * * denovo215 ITSPS35_62 * N * 243 * * * * * denovo216 ITSPS35_11831 * H 1738 308 87.7 + 0 0 1769I39M11D32M2I226M2044I denovo217 ITSPS35_12773 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 151 * * * * * denovo218 ITSPS35_1308 * N * 227 * * * * * denovo219 ITSPS35_13750 * N * 248 * * * * * denovo22 ITSPS35_4546 * N * 157 * * * * * denovo220 ITSPS35_7263 * N * 225 * * * * * denovo221 ITSPS35_15432 * N * 253 * * * * * denovo222 ITSPS35_13629 * N * 149 * * * * * denovo223 ITSPS35_1560 * N * 232 * * * * * denovo224 ITSPS35_10085 * N * 509 * * * * * denovo225 ITSPS35_13990 * N * 188 * * * * * denovo226 ITSPS35_7390 * N * 226 * * * * * denovo227 ITSPS35_15331 * N * 275 * * * * * denovo228 ITSPS35_14483 * N * 213 * * * * * denovo229 ITSPS35_16233 * N * 308 * * * * * denovo23 ITSPS35_14719 * N * 319 * * * * * denovo230 ITSPS35_16474 * N * 353 * * * * * denovo231 ITSPS35_1215 * N * 209 * * * * * denovo232 ITSPS35_16622 * N * 191 * * * * * denovo233 ITSPS35_5379 * H 1738 284 95.8 + 0 0 1769I168M12I34M3I82M2044I denovo234 ITSPS35_16126 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 857 883 * * * * * GU133574_1_Pythium_litorale_strain_PPRI8629_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence * H 857 284 84.5 + 0 0 31D137M12I34M3I82M615I denovo234 ITSPS35_16126 GU133574_1_Pythium_litorale_strain_PPRI8629_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence L 1718 905 * * * * * HQ643385_1_Phytopythium_litorale_voucher_CBS122662_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1718 284 83.8 + 0 0 30D138M12I34M3I82M636I denovo234 ITSPS35_16126 HQ643385_1_Phytopythium_litorale_voucher_CBS122662_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 225 * * * * * denovo235 ITSPS35_10652 * N * 303 * * * * * denovo236 ITSPS35_2543 * N * 172 * * * * * denovo237 ITSPS35_7520 * N * 163 * * * * * denovo238 ITSPS35_11719 * N * 321 * * * * * denovo239 ITSPS35_11490 * N * 204 * * * * * denovo24 ITSPS35_4027 * N * 318 * * * * * denovo240 ITSPS35_6713 * H 1742 179 80.4 + 0 0 1761I34M47I34M7I20M60I14M9I77M1868I denovo241 ITSPS35_6711 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 208 * * * * * denovo242 ITSPS35_10710 * N * 195 * * * * * denovo243 ITSPS35_6715 * N * 345 * * * * * denovo244 ITSPS35_5885 * N * 424 * * * * * denovo245 ITSPS35_1290 * N * 327 * * * * * denovo246 ITSPS35_13570 * N * 259 * * * * * denovo247 ITSPS35_1622 * N * 306 * * * * * denovo248 ITSPS35_3042 * N * 561 * * * * * denovo249 ITSPS35_5768 * N * 163 * * * * * denovo25 ITSPS35_37 * N * 174 * * * * * denovo250 ITSPS35_9393 * N * 398 * * * * * denovo251 ITSPS35_9397 * N * 408 * * * * * denovo252 ITSPS35_2665 * N * 261 * * * * * denovo253 ITSPS35_1829 * N * 221 * * * * * denovo254 COXIPS35_3910 * N * 192 * * * * * denovo255 ITSPS35_16121 * N * 221 * * * * * denovo256 ITSPS35_4874 * N * 195 * * * * * denovo257 ITSPS35_10978 * N * 229 * * * * * denovo258 ITSPS35_3203 * N * 227 * * * * * denovo259 ITSPS35_5289 * N * 258 * * * * * denovo26 ITSPS35_10947 * N * 439 * * * * * denovo260 ITSPS35_774 * N * 165 * * * * * denovo261 ITSPS35_11425 * N * 153 * * * * * denovo262 ITSPS35_2061 * L 487 865 * * * * * AJ854289_1_Phytophthora_cactorum_18S_rRNA_gene_partial_5_8S_rRNA_gene_28S_rRNA_gene_partial_ITS1_and_ITS2_isolate_Fr_an_1 * H 487 280 96.8 + 0 0 I280M584I denovo263 ITSPS35_14550 AJ854289_1_Phytophthora_cactorum_18S_rRNA_gene_partial_5_8S_rRNA_gene_28S_rRNA_gene_partial_ITS1_and_ITS2_isolate_Fr_an_1 L 2938 830 * * * * * PHYTOPHTHORA_IDAEI_CBS_96895_ITS * H 2938 280 96.1 + 0 0 10I280M540I denovo263 ITSPS35_14550 PHYTOPHTHORA_IDAEI_CBS_96895_ITS L 3040 818 * * * * * PHYTOPHTHORA_PSEUDOTSUGAE_CBS_44684_ITS * H 3040 280 95.7 + 0 0 D279M539I denovo263 ITSPS35_14550 PHYTOPHTHORA_PSEUDOTSUGAE_CBS_44684_ITS N * 249 * * * * * denovo264 ITSPS35_1827 * N * 172 * * * * * denovo265 ITSPS35_7614 * N * 159 * * * * * denovo266 ITSPS35_6789 * N * 160 * * * * * denovo267 ITSPS35_4971 * N * 148 * * * * * denovo268 ITSPS35_9715 * N * 379 * * * * * denovo269 ITSPS35_15252 * N * 196 * * * * * denovo27 ITSPS35_11801 * N * 219 * * * * * denovo270 ITSPS35_4974 * N * 289 * * * * * denovo271 ITSPS35_10625 * N * 523 * * * * * denovo272 BTPS35_10005 * N * 214 * * * * * denovo273 ITSPS35_1489 * N * 356 * * * * * denovo274 ITSPS35_6998 * N * 220 * * * * * denovo275 ITSPS35_1130 * N * 195 * * * * * denovo276 ITSPS35_5087 * N * 328 * * * * * denovo277 ITSPS35_6300 * N * 229 * * * * * denovo278 ITSPS35_13175 * N * 185 * * * * * denovo279 ITSPS35_13172 * N * 312 * * * * * denovo28 ITSPS35_16186 * N * 215 * * * * * denovo280 ITSPS35_6997 * N * 282 * * * * * denovo281 ITSPS35_11087 * N * 274 * * * * * denovo282 ITSPS35_3232 * N * 274 * * * * * denovo283 ITSPS35_1484 * N * 232 * * * * * denovo284 ITSPS35_1520 * N * 229 * * * * * denovo285 ITSPS35_12894 * N * 242 * * * * * denovo286 ITSPS35_2893 * N * 304 * * * * * denovo287 ITSPS35_1524 * N * 288 * * * * * denovo288 ITSPS35_829 * N * 301 * * * * * denovo289 ITSPS35_5598 * N * 194 * * * * * denovo29 ITSPS35_3722 * N * 201 * * * * * denovo290 ITSPS35_5450 * N * 195 * * * * * denovo291 ITSPS35_5452 * N * 271 * * * * * denovo292 ITSPS35_5596 * N * 306 * * * * * denovo293 ITSPS35_11394 * N * 309 * * * * * denovo294 ITSPS35_16053 * N * 223 * * * * * denovo295 ITSPS35_10971 * N * 285 * * * * * denovo296 ITSPS35_5756 * N * 214 * * * * * denovo297 ITSPS35_14914 * N * 277 * * * * * denovo298 ITSPS35_7362 * N * 211 * * * * * denovo299 ITSPS35_11960 * N * 207 * * * * * denovo3 ITSPS35_2951 * N * 523 * * * * * denovo30 BTPS35_6963 * N * 308 * * * * * denovo300 ITSPS35_12864 * N * 411 * * * * * denovo301 ITSPS35_8369 * N * 212 * * * * * denovo302 ITSPS35_12125 * N * 201 * * * * * denovo303 ITSPS35_2432 * N * 233 * * * * * denovo304 ITSPS35_8361 * N * 196 * * * * * denovo305 ITSPS35_1556 * N * 215 * * * * * denovo306 ITSPS35_2431 * N * 189 * * * * * denovo307 ITSPS35_4304 * N * 252 * * * * * denovo308 ITSPS35_12629 * N * 299 * * * * * denovo309 ITSPS35_3936 * N * 186 * * * * * denovo31 ITSPS35_16265 * N * 179 * * * * * denovo310 ITSPS35_4652 * N * 201 * * * * * denovo311 ITSPS35_9035 * N * 229 * * * * * denovo312 ITSPS35_15365 * N * 356 * * * * * denovo313 ITSPS35_8194 * N * 234 * * * * * denovo314 ITSPS35_3431 * N * 400 * * * * * denovo315 BTPS35_13091 * N * 311 * * * * * denovo316 ITSPS35_257 * N * 224 * * * * * denovo317 ITSPS35_15155 * N * 253 * * * * * denovo318 ITSPS35_15454 * N * 365 * * * * * denovo319 ITSPS35_16744 * N * 144 * * * * * denovo32 ITSPS35_5340 * N * 523 * * * * * denovo320 BTPS35_13587 * N * 229 * * * * * denovo321 ITSPS35_15096 * N * 237 * * * * * denovo322 ITSPS35_12811 * N * 235 * * * * * denovo323 ITSPS35_11995 * N * 279 * * * * * denovo324 ITSPS35_3990 * N * 312 * * * * * denovo325 ITSPS35_14706 * N * 246 * * * * * denovo326 ITSPS35_314 * N * 162 * * * * * denovo327 ITSPS35_11273 * N * 324 * * * * * denovo328 ITSPS35_16278 * N * 194 * * * * * denovo329 ITSPS35_3753 * N * 162 * * * * * denovo33 ITSPS35_38 * N * 272 * * * * * denovo330 ITSPS35_5235 * N * 212 * * * * * denovo331 ITSPS35_5234 * N * 202 * * * * * denovo332 ITSPS35_11879 * H 1541 191 91.6 + 0 0 1760I33M20I5M20I23M6I130M2048I denovo333 ITSPS35_3759 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1520 191 91.6 + 0 0 1764I33M21I5M20I23M6I130M2047I denovo333 ITSPS35_3759 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1546 4035 * * * * * AY598691_2_Pythium_flevoense_strain_CBS_234_72_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1546 191 88.0 + 0 0 1763I33M19I26M24I132M2038I denovo333 ITSPS35_3759 AY598691_2_Pythium_flevoense_strain_CBS_234_72_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 319 * * * * * denovo334 ITSPS35_5332 * N * 154 * * * * * denovo335 ITSPS35_12020 * N * 353 * * * * * denovo336 BTPS35_7981 * N * 278 * * * * * denovo337 ITSPS35_14681 * N * 149 * * * * * denovo338 ITSPS35_8888 * N * 156 * * * * * denovo339 ITSPS35_536 * N * 230 * * * * * denovo34 ITSPS35_39 * N * 418 * * * * * denovo340 ITSPS35_4158 * N * 399 * * * * * denovo341 ITSPS35_530 * N * 317 * * * * * denovo342 ITSPS35_531 * N * 523 * * * * * denovo343 BTPS35_1228 * N * 173 * * * * * denovo344 ITSPS35_7917 * N * 290 * * * * * denovo345 ITSPS35_3967 * N * 245 * * * * * denovo346 ITSPS35_10166 * N * 185 * * * * * denovo347 ITSPS35_2948 * N * 199 * * * * * denovo348 ITSPS35_407 * N * 339 * * * * * denovo349 ITSPS35_15273 * N * 187 * * * * * denovo35 ITSPS35_8957 * N * 239 * * * * * denovo350 ITSPS35_15691 * N * 226 * * * * * denovo351 ITSPS35_11886 * N * 185 * * * * * denovo352 ITSPS35_11880 * N * 227 * * * * * denovo353 ITSPS35_8769 * L 2713 607 * * * * * trnm_P_cryptogea_GII_P3103_A27 * H 2713 532 97.2 + 0 0 22I532M53I denovo354 trnMPS35_13986 trnm_P_cryptogea_GII_P3103_A27 L 2743 608 * * * * * trnm_P_kelmaniae_P10613_A777 * H 2743 532 96.8 + 0 0 23I532M53I denovo354 trnMPS35_13986 trnm_P_kelmaniae_P10613_A777 L 2714 607 * * * * * trnm_P_cryptogea_GI_P10672_A496 * H 2714 532 96.6 + 0 0 22I532M53I denovo354 trnMPS35_13986 trnm_P_cryptogea_GI_P10672_A496 N * 358 * * * * * denovo355 ITSPS35_8563 * N * 222 * * * * * denovo356 ITSPS35_6575 * N * 251 * * * * * denovo357 ITSPS35_7195 * N * 396 * * * * * denovo358 ITSPS35_849 * N * 313 * * * * * denovo359 ITSPS35_6579 * N * 233 * * * * * denovo36 ITSPS35_8484 * N * 172 * * * * * denovo360 ITSPS35_13957 * N * 252 * * * * * denovo361 ITSPS35_14670 * N * 147 * * * * * denovo362 ITSPS35_2931 * N * 340 * * * * * denovo363 ITSPS35_16343 * N * 226 * * * * * denovo364 ITSPS35_10454 * N * 414 * * * * * denovo365 ITSPS35_1867 * N * 227 * * * * * denovo366 ITSPS35_2447 * N * 332 * * * * * denovo367 ITSPS35_6904 * N * 523 * * * * * denovo368 BTPS35_2151 * N * 230 * * * * * denovo369 ITSPS35_1328 * N * 165 * * * * * denovo37 ITSPS35_525 * N * 224 * * * * * denovo370 ITSPS35_7655 * N * 225 * * * * * denovo371 ITSPS35_5520 * N * 319 * * * * * denovo372 ITSPS35_11616 * N * 175 * * * * * denovo373 ITSPS35_10697 * N * 218 * * * * * denovo374 ITSPS35_1703 * N * 215 * * * * * denovo375 ITSPS35_1874 * N * 248 * * * * * denovo376 ITSPS35_1872 * N * 154 * * * * * denovo377 ITSPS35_1871 * N * 232 * * * * * denovo378 ITSPS35_12301 * N * 230 * * * * * denovo379 ITSPS35_8584 * N * 199 * * * * * denovo38 BTPS35_9713 * N * 252 * * * * * denovo380 ITSPS35_8101 * H 756 262 90.1 + 0 0 346I45MD21M46I19MI9M11I167M532I denovo381 ITSPS35_9594 KJ755195_1_Phytophthora_taxon_Pgchlamydo_voucher_IMI389731_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_and_5_8S_ribosomal_RNA_gene_complete_sequence_and_internal_transcribed_spacer_2_partial_sequence H 2923 262 88.5 + 0 0 D44MD21M46I19MI9M11I56MD110M528I denovo381 ITSPS35_9594 PHYTOPHTHORA_GONAPODYIDES_CBS_117380_ITS H 1742 262 89.7 + 0 0 1761I116M8I6M11I15M47I27MI29MI69M1840I denovo381 ITSPS35_9594 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 182 * * * * * denovo382 ITSPS35_6310 * N * 228 * * * * * denovo383 ITSPS35_104 * N * 229 * * * * * denovo384 ITSPS35_107 * N * 302 * * * * * denovo385 ITSPS35_4043 * N * 274 * * * * * denovo386 ITSPS35_102 * N * 523 * * * * * denovo387 BTPS35_8652 * N * 159 * * * * * denovo388 ITSPS35_13488 * N * 324 * * * * * denovo389 ITSPS35_5240 * N * 484 * * * * * denovo39 ITSPS35_8953 * N * 197 * * * * * denovo390 ITSPS35_8299 * N * 331 * * * * * denovo391 ITSPS35_12571 * H 1742 163 89.6 + 0 0 1761I44M75I23M64I96M1868I denovo392 ITSPS35_13577 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1527 163 88.3 + 0 0 D43M77I23M65I96M601I denovo392 ITSPS35_13577 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 286 * * * * * denovo393 ITSPS35_2599 * N * 267 * * * * * denovo394 ITSPS35_11689 * N * 406 * * * * * denovo395 ITSPS35_3931 * N * 294 * * * * * denovo396 ITSPS35_6047 * N * 290 * * * * * denovo397 ITSPS35_10939 * N * 348 * * * * * denovo398 ITSPS35_2596 * N * 265 * * * * * denovo399 ITSPS35_3943 * N * 160 * * * * * denovo4 ITSPS35_2406 * N * 150 * * * * * denovo40 ITSPS35_2294 * N * 213 * * * * * denovo400 ITSPS35_12447 * N * 228 * * * * * denovo401 ITSPS35_1391 * N * 277 * * * * * denovo402 ITSPS35_3377 * N * 225 * * * * * denovo403 ITSPS35_14312 * N * 165 * * * * * denovo404 ITSPS35_2753 * N * 188 * * * * * denovo405 ITSPS35_16497 * N * 356 * * * * * denovo406 ITSPS35_3378 * N * 209 * * * * * denovo407 ITSPS35_2112 * N * 271 * * * * * denovo408 ITSPS35_7054 * N * 527 * * * * * denovo409 BTPS35_12299 * N * 170 * * * * * denovo41 ITSPS35_5352 * N * 186 * * * * * denovo410 ITSPS35_12430 * N * 422 * * * * * denovo411 ITSPS35_4941 * N * 253 * * * * * denovo412 ITSPS35_9747 * N * 343 * * * * * denovo413 ITSPS35_8619 * N * 263 * * * * * denovo414 ITSPS35_13436 * N * 250 * * * * * denovo415 ITSPS35_13435 * N * 211 * * * * * denovo416 ITSPS35_16019 * N * 200 * * * * * denovo417 ITSPS35_16157 * N * 198 * * * * * denovo418 ITSPS35_13476 * N * 274 * * * * * denovo419 ITSPS35_5418 * N * 300 * * * * * denovo42 ITSPS35_11965 * N * 279 * * * * * denovo420 ITSPS35_14955 * N * 202 * * * * * denovo421 ITSPS35_7298 * N * 222 * * * * * denovo422 ITSPS35_6681 * N * 348 * * * * * denovo423 ITSPS35_14958 * N * 191 * * * * * denovo424 ITSPS35_8962 * N * 290 * * * * * denovo425 ITSPS35_16341 * N * 224 * * * * * denovo426 ITSPS35_5414 * N * 217 * * * * * denovo427 ITSPS35_11352 * N * 199 * * * * * denovo428 ITSPS35_9621 * N * 233 * * * * * denovo429 ITSPS35_13343 * N * 264 * * * * * denovo43 ITSPS35_8488 * N * 305 * * * * * denovo430 ITSPS35_1544 * H 1742 329 80.5 + 0 0 1761I32M15D27M12D243M1868I denovo431 ITSPS35_9825 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 224 * * * * * denovo432 ITSPS35_1516 * N * 237 * * * * * denovo433 ITSPS35_1517 * N * 197 * * * * * denovo434 ITSPS35_12702 * N * 193 * * * * * denovo435 ITSPS35_9986 * N * 207 * * * * * denovo436 ITSPS35_9629 * N * 200 * * * * * denovo437 ITSPS35_15282 * L 825 731 * * * * * GU133465_1_Pythium_litorale_strain_PPRI8629_cytochrome_c_oxidase_subunit_I_gene_partial_cds_mitochondrial * H 825 329 90.6 + 0 0 13I329M389I denovo438 COXIPS35_3394 GU133465_1_Pythium_litorale_strain_PPRI8629_cytochrome_c_oxidase_subunit_I_gene_partial_cds_mitochondrial L 828 681 * * * * * HQ708717_1_Pythium_litorale_voucher_Lev3013_cytochrome_oxidase_subunit_1_COI_gene_partial_cds_mitochondrial * H 828 329 90.3 + 0 0 329M352I denovo438 COXIPS35_3394 HQ708717_1_Pythium_litorale_voucher_Lev3013_cytochrome_oxidase_subunit_1_COI_gene_partial_cds_mitochondrial L 1311 811 * * * * * EF406093_1_Pythium_sterilum_isolate_WD41a45_cytochrome_c_oxidase_subunit_I_coxI_gene_partial_cds_mitochondrial * H 1311 329 97.6 + 0 0 15I284M351I45M116I denovo438 COXIPS35_3394 EF406093_1_Pythium_sterilum_isolate_WD41a45_cytochrome_c_oxidase_subunit_I_coxI_gene_partial_cds_mitochondrial N * 516 * * * * * denovo439 ITSPS35_14253 * N * 230 * * * * * denovo44 ITSPS35_8959 * N * 167 * * * * * denovo440 ITSPS35_12380 * N * 371 * * * * * denovo441 ITSPS35_2478 * N * 222 * * * * * denovo442 ITSPS35_12194 * N * 234 * * * * * denovo443 ITSPS35_12210 * N * 194 * * * * * denovo444 ITSPS35_9491 * N * 223 * * * * * denovo445 ITSPS35_1453 * N * 279 * * * * * denovo446 ITSPS35_7641 * N * 274 * * * * * denovo447 ITSPS35_813 * N * 222 * * * * * denovo448 ITSPS35_2473 * N * 228 * * * * * denovo449 ITSPS35_15898 * N * 416 * * * * * denovo45 ITSPS35_15207 * L 2706 628 * * * * * trnm_P_cinnammomi_P2159_A183 * H 2706 339 99.1 + 0 0 23I304M14I35M252I denovo450 trnMPS35_4364 trnm_P_cinnammomi_P2159_A183 L 2707 625 * * * * * trnm_P_cinnammomi_P2428_A185 * H 2707 339 99.1 + 0 0 21I304M14I35M251I denovo450 trnMPS35_4364 trnm_P_cinnammomi_P2428_A185 L 2708 627 * * * * * trnm_P_cinnammomi_P3232_A195 * H 2708 339 99.1 + 0 0 23I304M14I35M251I denovo450 trnMPS35_4364 trnm_P_cinnammomi_P3232_A195 N * 290 * * * * * denovo451 ITSPS35_12284 * N * 231 * * * * * denovo452 ITSPS35_4303 * N * 182 * * * * * denovo453 ITSPS35_11439 * N * 204 * * * * * denovo454 ITSPS35_12326 * N * 213 * * * * * denovo455 ITSPS35_1998 * N * 277 * * * * * denovo456 ITSPS35_14360 * H 1742 339 80.2 + 0 0 1679I66M6I23M2I34M37I216M1868I denovo457 ITSPS35_10802 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 226 * * * * * denovo458 ITSPS35_213 * N * 323 * * * * * denovo459 ITSPS35_2538 * N * 179 * * * * * denovo46 ITSPS35_6337 * N * 179 * * * * * denovo460 ITSPS35_215 * N * 223 * * * * * denovo461 ITSPS35_5115 * N * 402 * * * * * denovo462 ITSPS35_1687 * N * 251 * * * * * denovo463 ITSPS35_10808 * N * 310 * * * * * denovo464 ITSPS35_15114 * N * 231 * * * * * denovo465 ITSPS35_13407 * N * 191 * * * * * denovo466 ITSPS35_923 * N * 173 * * * * * denovo467 ITSPS35_12105 * N * 251 * * * * * denovo468 ITSPS35_12106 * N * 196 * * * * * denovo469 ITSPS35_12107 * N * 206 * * * * * denovo47 ITSPS35_6336 * N * 523 * * * * * denovo470 BTPS35_14889 * N * 250 * * * * * denovo471 ITSPS35_7920 * N * 523 * * * * * denovo472 BTPS35_15367 * N * 335 * * * * * denovo473 ITSPS35_735 * N * 160 * * * * * denovo474 ITSPS35_12260 * N * 199 * * * * * denovo475 ITSPS35_1299 * N * 229 * * * * * denovo476 ITSPS35_3155 * N * 152 * * * * * denovo477 ITSPS35_4056 * N * 234 * * * * * denovo478 ITSPS35_4057 * N * 210 * * * * * denovo479 ITSPS35_15730 * N * 188 * * * * * denovo48 ITSPS35_417 * N * 232 * * * * * denovo480 ITSPS35_15731 * N * 216 * * * * * denovo481 trnMPS35_361 * N * 384 * * * * * denovo482 COXIPS35_8351 * N * 224 * * * * * denovo483 ITSPS35_1515 * L 3777 4097 * * * * * HQ643476_2_Pythium_attrantheridium_voucher_DAOM230386_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 3777 289 95.2 + 0 0 1773I40MD73M7D168M2043I denovo484 ITSPS35_10339 HQ643476_2_Pythium_attrantheridium_voucher_DAOM230386_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 261 * * * * * denovo485 ITSPS35_10895 * N * 201 * * * * * denovo486 ITSPS35_10897 * N * 335 * * * * * denovo487 ITSPS35_15382 * N * 291 * * * * * denovo488 ITSPS35_286 * N * 435 * * * * * denovo489 ITSPS35_6269 * N * 203 * * * * * denovo49 ITSPS35_415 * N * 223 * * * * * denovo490 ITSPS35_6141 * N * 192 * * * * * denovo491 ITSPS35_282 * N * 311 * * * * * denovo492 ITSPS35_10336 * N * 425 * * * * * denovo493 ITSPS35_5543 * N * 182 * * * * * denovo494 ITSPS35_6386 * N * 317 * * * * * denovo495 ITSPS35_5028 * N * 198 * * * * * denovo496 ITSPS35_7311 * N * 226 * * * * * denovo497 ITSPS35_1052 * N * 265 * * * * * denovo498 ITSPS35_15237 * N * 311 * * * * * denovo499 ITSPS35_14733 * N * 220 * * * * * denovo5 ITSPS35_8310 * N * 173 * * * * * denovo50 ITSPS35_15366 * N * 222 * * * * * denovo500 ITSPS35_889 * N * 393 * * * * * denovo501 BTPS35_2114 * N * 243 * * * * * denovo502 ITSPS35_5560 * N * 399 * * * * * denovo503 ITSPS35_4432 * N * 167 * * * * * denovo504 ITSPS35_7301 * N * 252 * * * * * denovo505 ITSPS35_5566 * H 1546 175 86.3 + 0 0 1763I32M13I17M32I29M14I97M2038I denovo506 ITSPS35_11824 AY598691_2_Pythium_flevoense_strain_CBS_234_72_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1508 4038 * * * * * AY598635_2_Pythium_capillosum_strain_CBS_222_94_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1508 175 84.6 + 0 0 1756I49M11I21M48I105M2048I denovo506 ITSPS35_11824 AY598635_2_Pythium_capillosum_strain_CBS_222_94_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1621 175 84.6 + 0 0 1758I49M11I21M48I105M1913I denovo506 ITSPS35_11824 HQ643739_2_Pythium_pectinolyticum_voucher_CBS122643_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1738 204 88.2 + 0 0 1769I40M53I20M31I11M3I14M5I37M3I82M2044I denovo507 ITSPS35_57 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1737 4010 * * * * * HQ643375_2_Phytopythium_citrinum_voucher_CBS119171_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1737 204 81.4 + 0 0 1768I27M11I39MI63MI31MD43M2026I denovo507 ITSPS35_57 HQ643375_2_Phytopythium_citrinum_voucher_CBS119171_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1736 204 88.2 + 0 0 1768I40M56I36M45I8M20I16MD24MD78M2003I denovo507 ITSPS35_57 HQ643373_2_Phytopythium_carbonicum_voucher_CBS112544_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 249 * * * * * denovo508 ITSPS35_52 * N * 217 * * * * * denovo509 ITSPS35_5207 * N * 334 * * * * * denovo51 ITSPS35_8418 * N * 228 * * * * * denovo510 ITSPS35_15540 * N * 209 * * * * * denovo511 ITSPS35_15543 * N * 151 * * * * * denovo512 ITSPS35_15160 * N * 216 * * * * * denovo513 ITSPS35_14637 * N * 408 * * * * * denovo514 ITSPS35_13681 * H 756 280 93.9 + 0 0 346I46MI25M10I209M560I denovo515 ITSPS35_15424 KJ755195_1_Phytophthora_taxon_Pgchlamydo_voucher_IMI389731_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_and_5_8S_ribosomal_RNA_gene_complete_sequence_and_internal_transcribed_spacer_2_partial_sequence L 2315 848 * * * * * PD_00472_ITS_Phytophthora_taxon_Pgchlamydo * H 2315 280 85.7 + 0 0 22D49M10I209M580I denovo515 ITSPS35_15424 PD_00472_ITS_Phytophthora_taxon_Pgchlamydo L 2319 849 * * * * * PD_00420_ITS_Phytophthora_taxon_Pgchlamydo * H 2319 280 85.7 + 0 0 22D18MI31M10I209M580I denovo515 ITSPS35_15424 PD_00420_ITS_Phytophthora_taxon_Pgchlamydo L 3781 4335 * * * * * HQ643778_2_Pythium_sp_CAL2011f_voucher_CBS101876_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 3781 239 81.6 + 0 0 1771I62M27I12M29I25M9I33M10I12M4I11M5I12MD71M2242I denovo516 ITSPS35_13683 HQ643778_2_Pythium_sp_CAL2011f_voucher_CBS101876_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 3780 239 81.6 + 0 0 1763I48MI15M7I22M11I13M62I13M19I6M24I37M3I13MD31MD39M2006I denovo516 ITSPS35_13683 HQ643761_2_Pythium_rostratifingens_voucher_CBS115464_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1672 4189 * * * * * AY598645_2_Pythium_sylvaticum_strain_CBS_453_67_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1672 239 84.1 + 0 0 1760I49MI13MI14M17I23M29I12M47I22M12I16M2I5M5I13MD71M2077I denovo516 ITSPS35_13683 AY598645_2_Pythium_sylvaticum_strain_CBS_453_67_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 200 * * * * * denovo517 ITSPS35_7691 * N * 163 * * * * * denovo518 ITSPS35_7693 * N * 496 * * * * * denovo519 ITSPS35_8023 * N * 264 * * * * * denovo52 ITSPS35_14784 * N * 302 * * * * * denovo520 ITSPS35_8389 * N * 160 * * * * * denovo521 ITSPS35_7224 * H 1742 331 86.1 + 0 0 1761I46M29D256M1868I denovo522 ITSPS35_13612 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 630 836 * * * * * AY995387_1_Phytophthora_medicaginis_x_cryptogea_isolate_P71_B11b_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 630 195 87.7 + 0 0 8D133M104I54M545I denovo523 ITSPS35_5930 AY995387_1_Phytophthora_medicaginis_x_cryptogea_isolate_P71_B11b_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 224 * * * * * denovo524 ITSPS35_12901 * N * 214 * * * * * denovo525 ITSPS35_9070 * N * 184 * * * * * denovo526 ITSPS35_14649 * N * 290 * * * * * denovo527 ITSPS35_8439 * N * 307 * * * * * denovo528 ITSPS35_5939 * N * 226 * * * * * denovo529 ITSPS35_149 * N * 226 * * * * * denovo53 ITSPS35_15716 * N * 216 * * * * * denovo530 ITSPS35_148 * N * 230 * * * * * denovo531 ITSPS35_9551 * N * 167 * * * * * denovo532 ITSPS35_16205 * N * 264 * * * * * denovo533 ITSPS35_3497 * N * 219 * * * * * denovo534 ITSPS35_7993 * N * 191 * * * * * denovo535 ITSPS35_16209 * H 770 212 84.4 + 0 0 1765I148M11I64M1922I denovo536 ITSPS35_142 AY598708_2_Phytophthora_undulata_strain_CBS_157_69_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1637 4052 * * * * * AY598652_2_Pythium_prolatum_strain_CBS_845_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1637 212 80.2 + 0 0 1760I79MI45M2I24M11I64M2066I denovo536 ITSPS35_142 AY598652_2_Pythium_prolatum_strain_CBS_845_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1474 212 80.7 + 0 0 1770I44MI81MI14M12I73M2064I denovo536 ITSPS35_142 AY598650_3_Pythium_anandrum_strain_CBS_285_31_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 195 * * * * * denovo537 ITSPS35_9559 * N * 309 * * * * * denovo538 ITSPS35_5369 * N * 164 * * * * * denovo539 ITSPS35_14088 * N * 270 * * * * * denovo54 ITSPS35_14787 * N * 202 * * * * * denovo540 ITSPS35_4225 * N * 322 * * * * * denovo541 ITSPS35_11481 * N * 178 * * * * * denovo542 ITSPS35_10467 * N * 362 * * * * * denovo543 ITSPS35_10460 * N * 380 * * * * * denovo544 ITSPS35_6643 * N * 235 * * * * * denovo545 ITSPS35_6862 * N * 195 * * * * * denovo546 ITSPS35_16060 * N * 166 * * * * * denovo547 BTPS35_16049 * N * 245 * * * * * denovo548 ITSPS35_11647 * N * 184 * * * * * denovo549 ITSPS35_1885 * N * 238 * * * * * denovo55 ITSPS35_991 * N * 188 * * * * * denovo550 ITSPS35_9389 * N * 222 * * * * * denovo551 ITSPS35_16595 * N * 300 * * * * * denovo552 ITSPS35_717 * N * 422 * * * * * denovo553 ITSPS35_16294 * N * 193 * * * * * denovo554 ITSPS35_12940 * N * 344 * * * * * denovo555 ITSPS35_16296 * N * 191 * * * * * denovo556 ITSPS35_7030 * N * 232 * * * * * denovo557 ITSPS35_785 * H 2706 533 96.1 + 0 0 23I311M7I79M8I143M57I denovo558 trnMPS35_12633 trnm_P_cinnammomi_P2159_A183 H 2707 533 96.1 + 0 0 21I311M7I79M8I143M56I denovo558 trnMPS35_12633 trnm_P_cinnammomi_P2428_A185 H 2708 533 96.1 + 0 0 23I311M7I79M8I143M56I denovo558 trnMPS35_12633 trnm_P_cinnammomi_P3232_A195 H 1738 266 92.1 + 0 0 1769I169M32I12M2I14MD70M2044I denovo559 ITSPS35_12742 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 199 * * * * * denovo56 ITSPS35_9577 * N * 194 * * * * * denovo560 ITSPS35_14012 * N * 239 * * * * * denovo561 ITSPS35_8151 * N * 304 * * * * * denovo562 ITSPS35_13748 * N * 188 * * * * * denovo563 ITSPS35_13868 * N * 193 * * * * * denovo564 ITSPS35_5515 * N * 187 * * * * * denovo565 ITSPS35_9788 * N * 144 * * * * * denovo566 ITSPS35_13860 * N * 238 * * * * * denovo567 ITSPS35_9700 * H 2706 355 98.6 + 0 0 23I178M193I177M57I denovo568 trnMPS35_16681 trnm_P_cinnammomi_P2159_A183 H 2707 355 98.6 + 0 0 21I178M193I177M56I denovo568 trnMPS35_16681 trnm_P_cinnammomi_P2428_A185 H 2708 355 98.6 + 0 0 23I178M193I177M56I denovo568 trnMPS35_16681 trnm_P_cinnammomi_P3232_A195 N * 222 * * * * * denovo569 ITSPS35_9702 * N * 221 * * * * * denovo57 ITSPS35_6449 * N * 314 * * * * * denovo570 ITSPS35_9705 * N * 270 * * * * * denovo571 ITSPS35_2722 * N * 361 * * * * * denovo572 ITSPS35_11782 * N * 267 * * * * * denovo573 ITSPS35_1646 * N * 204 * * * * * denovo574 BTPS35_5033 * N * 284 * * * * * denovo575 ITSPS35_326 * N * 196 * * * * * denovo576 ITSPS35_3804 * N * 374 * * * * * denovo577 ITSPS35_5284 * N * 195 * * * * * denovo578 ITSPS35_1943 * N * 236 * * * * * denovo579 ITSPS35_242 * N * 170 * * * * * denovo58 ITSPS35_995 * H 487 280 100.0 + 0 0 I280M584I denovo580 ITSPS35_1129 AJ854289_1_Phytophthora_cactorum_18S_rRNA_gene_partial_5_8S_rRNA_gene_28S_rRNA_gene_partial_ITS1_and_ITS2_isolate_Fr_an_1 H 2938 280 99.3 + 0 0 10I280M540I denovo580 ITSPS35_1129 PHYTOPHTHORA_IDAEI_CBS_96895_ITS H 3040 280 98.9 + 0 0 D279M539I denovo580 ITSPS35_1129 PHYTOPHTHORA_PSEUDOTSUGAE_CBS_44684_ITS N * 299 * * * * * denovo581 ITSPS35_12003 * N * 218 * * * * * denovo582 ITSPS35_3474 * N * 283 * * * * * denovo583 ITSPS35_3636 * N * 400 * * * * * denovo584 ITSPS35_11367 * N * 284 * * * * * denovo585 ITSPS35_9778 * N * 194 * * * * * denovo586 ITSPS35_3333 * N * 220 * * * * * denovo587 ITSPS35_14269 * N * 275 * * * * * denovo588 ITSPS35_13548 * H 756 154 95.5 + 0 0 346I36M11I7M7I13M119I98M560I denovo589 ITSPS35_16062 KJ755195_1_Phytophthora_taxon_Pgchlamydo_voucher_IMI389731_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_and_5_8S_ribosomal_RNA_gene_complete_sequence_and_internal_transcribed_spacer_2_partial_sequence L 614 855 * * * * * KF286884_1_Phytophthora_lacustris_strain_IBL554_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 614 154 95.5 + 0 0 6I36M10I7M7I12M119I99M559I denovo589 ITSPS35_16062 KF286884_1_Phytophthora_lacustris_strain_IBL554_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 2923 154 93.5 + 0 0 D35M11I7M7I15M79I4M39I92M556I denovo589 ITSPS35_16062 PHYTOPHTHORA_GONAPODYIDES_CBS_117380_ITS N * 246 * * * * * denovo59 ITSPS35_14300 * H 1742 229 81.7 + 0 0 1761I125M28I13M17I16M5I17M2I10M21I48M1868I denovo590 ITSPS35_4914 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1527 229 80.3 + 0 0 D39MI68MI21M34I16M17I26M2I10M21I48M601I denovo590 ITSPS35_4914 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 179 * * * * * denovo591 ITSPS35_16065 * N * 198 * * * * * denovo592 ITSPS35_3339 * N * 224 * * * * * denovo593 ITSPS35_11167 * N * 196 * * * * * denovo594 ITSPS35_11165 * N * 163 * * * * * denovo595 ITSPS35_15551 * N * 198 * * * * * denovo596 ITSPS35_14909 * N * 225 * * * * * denovo597 ITSPS35_14907 * N * 256 * * * * * denovo598 ITSPS35_6101 * N * 205 * * * * * denovo599 ITSPS35_9173 * N * 218 * * * * * denovo6 ITSPS35_11892 * N * 195 * * * * * denovo60 ITSPS35_2921 * N * 232 * * * * * denovo600 ITSPS35_11169 * N * 273 * * * * * denovo601 ITSPS35_1955 * N * 221 * * * * * denovo602 ITSPS35_12221 * N * 226 * * * * * denovo603 ITSPS35_8188 * H 1520 216 84.3 + 0 0 1764I37M19I47M3I132M2047I denovo604 ITSPS35_2426 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1541 216 84.3 + 0 0 1760I37M18I47M3I132M2048I denovo604 ITSPS35_2426 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1546 216 84.7 + 0 0 1763I44M17I24MD15M2I132M2038I denovo604 ITSPS35_2426 AY598691_2_Pythium_flevoense_strain_CBS_234_72_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 146 * * * * * denovo605 ITSPS35_1464 * N * 163 * * * * * denovo606 ITSPS35_7294 * N * 250 * * * * * denovo607 ITSPS35_3688 * N * 294 * * * * * denovo608 ITSPS35_15939 * N * 456 * * * * * denovo609 ITSPS35_7351 * N * 273 * * * * * denovo61 ITSPS35_16348 * N * 421 * * * * * denovo610 ITSPS35_13315 * N * 290 * * * * * denovo611 ITSPS35_2429 * N * 325 * * * * * denovo612 ITSPS35_5329 * N * 206 * * * * * denovo613 ITSPS35_3529 * N * 225 * * * * * denovo614 ITSPS35_15320 * N * 232 * * * * * denovo615 ITSPS35_4310 * N * 210 * * * * * denovo616 ITSPS35_4315 * N * 169 * * * * * denovo617 ITSPS35_13981 * N * 255 * * * * * denovo618 ITSPS35_3118 * N * 235 * * * * * denovo619 ITSPS35_6195 * N * 194 * * * * * denovo62 ITSPS35_8006 * N * 251 * * * * * denovo620 ITSPS35_965 * N * 222 * * * * * denovo621 ITSPS35_14109 * N * 425 * * * * * denovo622 ITSPS35_3063 * N * 276 * * * * * denovo623 ITSPS35_962 * N * 351 * * * * * denovo624 ITSPS35_11182 * N * 297 * * * * * denovo625 ITSPS35_11500 * N * 292 * * * * * denovo626 ITSPS35_5636 * N * 195 * * * * * denovo627 ITSPS35_5631 * N * 258 * * * * * denovo628 ITSPS35_10618 * N * 358 * * * * * denovo629 ITSPS35_10997 * N * 279 * * * * * denovo63 ITSPS35_13793 * N * 167 * * * * * denovo630 ITSPS35_16224 * N * 255 * * * * * denovo631 ITSPS35_9244 * N * 305 * * * * * denovo632 ITSPS35_1492 * N * 339 * * * * * denovo633 ITSPS35_322 * N * 202 * * * * * denovo634 ITSPS35_8274 * N * 322 * * * * * denovo635 ITSPS35_5148 * N * 234 * * * * * denovo636 ITSPS35_329 * N * 274 * * * * * denovo637 ITSPS35_11262 * N * 179 * * * * * denovo638 ITSPS35_12891 * N * 230 * * * * * denovo639 ITSPS35_15647 * N * 523 * * * * * denovo64 BTPS35_9219 * N * 306 * * * * * denovo640 ITSPS35_15644 * N * 187 * * * * * denovo641 ITSPS35_245 * N * 202 * * * * * denovo642 ITSPS35_7817 * N * 298 * * * * * denovo643 ITSPS35_10559 * N * 166 * * * * * denovo644 ITSPS35_16245 * N * 209 * * * * * denovo645 ITSPS35_11869 * N * 340 * * * * * denovo646 ITSPS35_8378 * N * 195 * * * * * denovo647 ITSPS35_16242 * N * 197 * * * * * denovo648 ITSPS35_16241 * N * 193 * * * * * denovo649 ITSPS35_6549 * N * 223 * * * * * denovo65 ITSPS35_11743 * N * 226 * * * * * denovo650 ITSPS35_9458 * N * 373 * * * * * denovo651 ITSPS35_8183 * N * 229 * * * * * denovo652 ITSPS35_6542 * N * 408 * * * * * denovo653 ITSPS35_14594 * N * 192 * * * * * denovo654 ITSPS35_10907 * N * 281 * * * * * denovo655 ITSPS35_16654 * N * 294 * * * * * denovo656 ITSPS35_4164 * N * 405 * * * * * denovo657 ITSPS35_15748 * N * 214 * * * * * denovo658 ITSPS35_11980 * N * 246 * * * * * denovo659 ITSPS35_10104 * N * 177 * * * * * denovo66 ITSPS35_11669 * N * 350 * * * * * denovo660 ITSPS35_10512 * N * 199 * * * * * denovo661 ITSPS35_7790 * N * 382 * * * * * denovo662 ITSPS35_7792 * N * 268 * * * * * denovo663 ITSPS35_5324 * N * 310 * * * * * denovo664 ITSPS35_17 * N * 257 * * * * * denovo665 ITSPS35_4480 * N * 145 * * * * * denovo666 ITSPS35_437 * N * 144 * * * * * denovo667 ITSPS35_430 * N * 245 * * * * * denovo668 ITSPS35_10567 * N * 225 * * * * * denovo669 ITSPS35_6359 * N * 320 * * * * * denovo67 ITSPS35_10764 * N * 248 * * * * * denovo670 ITSPS35_4763 * N * 235 * * * * * denovo671 ITSPS35_448 * N * 215 * * * * * denovo672 ITSPS35_8877 * N * 308 * * * * * denovo673 ITSPS35_1068 * N * 222 * * * * * denovo674 ITSPS35_183 * N * 339 * * * * * denovo675 ITSPS35_15640 * H 756 287 94.4 + 0 0 346I45M2I52M2I190M560I denovo676 ITSPS35_7233 KJ755195_1_Phytophthora_taxon_Pgchlamydo_voucher_IMI389731_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_and_5_8S_ribosomal_RNA_gene_complete_sequence_and_internal_transcribed_spacer_2_partial_sequence H 2923 287 93.4 + 0 0 D44M2I52M2I107MD82M556I denovo676 ITSPS35_7233 PHYTOPHTHORA_GONAPODYIDES_CBS_117380_ITS N * 239 * * * * * denovo677 ITSPS35_16054 * N * 198 * * * * * denovo678 ITSPS35_13927 * H 3780 364 98.9 + 0 0 1763I364M2006I denovo679 ITSPS35_15340 HQ643761_2_Pythium_rostratifingens_voucher_CBS115464_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 199 * * * * * denovo68 trnMPS35_11799 * N * 527 * * * * * denovo680 BTPS35_1249 * N * 283 * * * * * denovo681 ITSPS35_8981 * N * 185 * * * * * denovo682 ITSPS35_4504 * N * 223 * * * * * denovo683 ITSPS35_8985 * N * 349 * * * * * denovo684 ITSPS35_9749 * N * 395 * * * * * denovo685 ITSPS35_5998 * N * 192 * * * * * denovo686 ITSPS35_12470 * N * 223 * * * * * denovo687 ITSPS35_8783 * N * 282 * * * * * denovo688 ITSPS35_754 * N * 228 * * * * * denovo689 ITSPS35_2512 * N * 206 * * * * * denovo69 ITSPS35_10442 * N * 219 * * * * * denovo690 ITSPS35_2516 * H 1738 300 96.0 + 0 0 1769I258MD41M2044I denovo691 ITSPS35_10037 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 358 * * * * * denovo692 ITSPS35_13038 * N * 157 * * * * * denovo693 ITSPS35_16391 * N * 163 * * * * * denovo694 ITSPS35_14503 * N * 306 * * * * * denovo695 ITSPS35_13725 * N * 254 * * * * * denovo696 ITSPS35_13535 * N * 326 * * * * * denovo697 ITSPS35_13664 * N * 345 * * * * * denovo698 ITSPS35_5968 * N * 220 * * * * * denovo699 ITSPS35_115 * N * 283 * * * * * denovo7 ITSPS35_247 * N * 523 * * * * * denovo70 BTPS35_12486 * N * 225 * * * * * denovo700 ITSPS35_362 * H 1742 291 88.7 + 0 0 1761I31M8I38M3I222M1868I denovo701 ITSPS35_8976 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 878 846 * * * * * KX098469_1_Phytopythium_vexans_isolate_HF1_clone_I1_1_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 878 291 80.1 + 0 0 6D59M10D216M571I denovo701 ITSPS35_8976 KX098469_1_Phytopythium_vexans_isolate_HF1_clone_I1_1_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1527 291 83.8 + 0 0 D29M9I39M3I25MI72M3D22M4I100M601I denovo701 ITSPS35_8976 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 334 * * * * * denovo702 ITSPS35_505 * N * 281 * * * * * denovo703 ITSPS35_13641 * N * 182 * * * * * denovo704 ITSPS35_16226 * N * 216 * * * * * denovo705 ITSPS35_5715 * N * 189 * * * * * denovo706 ITSPS35_12128 * N * 149 * * * * * denovo707 BTPS35_10308 * N * 249 * * * * * denovo708 ITSPS35_5395 * N * 191 * * * * * denovo709 ITSPS35_9 * N * 252 * * * * * denovo71 ITSPS35_11809 * N * 233 * * * * * denovo710 ITSPS35_15947 * N * 149 * * * * * denovo711 ITSPS35_15744 * N * 219 * * * * * denovo712 ITSPS35_15940 * N * 310 * * * * * denovo713 ITSPS35_16564 * N * 414 * * * * * denovo714 ITSPS35_6556 * N * 223 * * * * * denovo715 ITSPS35_11638 * N * 212 * * * * * denovo716 ITSPS35_10923 * N * 523 * * * * * denovo717 BTPS35_12027 * N * 305 * * * * * denovo718 ITSPS35_5718 * N * 206 * * * * * denovo719 ITSPS35_10638 * N * 344 * * * * * denovo72 ITSPS35_10444 * H 1742 240 95.8 + 0 0 1761I240M1930I denovo720 ITSPS35_2251 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1527 240 90.0 + 0 0 D39MI65MI72M3D22M4I38M663I denovo720 ITSPS35_2251 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 169 * * * * * denovo721 ITSPS35_6079 * N * 192 * * * * * denovo722 ITSPS35_12985 * N * 440 * * * * * denovo723 ITSPS35_15874 * N * 254 * * * * * denovo724 ITSPS35_14231 * N * 363 * * * * * denovo725 ITSPS35_12599 * N * 224 * * * * * denovo726 ITSPS35_6925 * N * 161 * * * * * denovo727 ITSPS35_13851 * N * 197 * * * * * denovo728 ITSPS35_3794 * N * 173 * * * * * denovo729 ITSPS35_5359 * N * 173 * * * * * denovo73 ITSPS35_13402 * N * 239 * * * * * denovo730 ITSPS35_4957 * N * 144 * * * * * denovo731 ITSPS35_16413 * N * 172 * * * * * denovo732 ITSPS35_8286 * N * 179 * * * * * denovo733 ITSPS35_12526 * N * 165 * * * * * denovo734 ITSPS35_1587 * N * 205 * * * * * denovo735 ITSPS35_4815 * N * 227 * * * * * denovo736 ITSPS35_7637 * N * 212 * * * * * denovo737 ITSPS35_13565 * N * 267 * * * * * denovo738 ITSPS35_16025 * N * 191 * * * * * denovo739 ITSPS35_9632 * N * 240 * * * * * denovo74 ITSPS35_1714 * N * 301 * * * * * denovo740 ITSPS35_16023 * N * 262 * * * * * denovo741 ITSPS35_9721 * N * 397 * * * * * denovo742 BTPS35_14288 * H 2713 532 96.2 + 0 0 22I532M53I denovo743 trnMPS35_850 trnm_P_cryptogea_GII_P3103_A27 H 2743 532 95.9 + 0 0 23I532M53I denovo743 trnMPS35_850 trnm_P_kelmaniae_P10613_A777 H 2714 532 95.7 + 0 0 22I532M53I denovo743 trnMPS35_850 trnm_P_cryptogea_GI_P10672_A496 N * 236 * * * * * denovo744 ITSPS35_13350 * N * 523 * * * * * denovo745 BTPS35_12788 * N * 199 * * * * * denovo746 ITSPS35_2305 * N * 225 * * * * * denovo747 ITSPS35_2306 * N * 321 * * * * * denovo748 ITSPS35_10770 * N * 293 * * * * * denovo749 ITSPS35_10894 * N * 299 * * * * * denovo75 ITSPS35_10686 * N * 221 * * * * * denovo750 ITSPS35_2265 * N * 374 * * * * * denovo751 ITSPS35_10811 * N * 222 * * * * * denovo752 ITSPS35_5135 * N * 324 * * * * * denovo753 ITSPS35_8239 * N * 226 * * * * * denovo754 ITSPS35_15880 * N * 206 * * * * * denovo755 ITSPS35_1938 * N * 235 * * * * * denovo756 ITSPS35_808 * N * 195 * * * * * denovo757 ITSPS35_12542 * N * 197 * * * * * denovo758 ITSPS35_4738 * N * 238 * * * * * denovo759 ITSPS35_1932 * N * 246 * * * * * denovo76 ITSPS35_737 * N * 174 * * * * * denovo760 ITSPS35_12772 * N * 197 * * * * * denovo761 BTPS35_152 * N * 264 * * * * * denovo762 ITSPS35_12775 * N * 241 * * * * * denovo763 ITSPS35_6044 * N * 312 * * * * * denovo764 ITSPS35_1985 * N * 259 * * * * * denovo765 ITSPS35_12293 * N * 294 * * * * * denovo766 ITSPS35_3242 * H 1541 209 94.3 + 0 0 1760I75M28I134M2048I denovo767 ITSPS35_12295 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1520 209 94.3 + 0 0 1764I47MI28M28I134M2047I denovo767 ITSPS35_12295 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1621 209 92.3 + 0 0 1758I39MD35M26I134M1913I denovo767 ITSPS35_12295 HQ643739_2_Pythium_pectinolyticum_voucher_CBS122643_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 239 * * * * * denovo768 ITSPS35_1980 * N * 251 * * * * * denovo769 ITSPS35_9645 * N * 362 * * * * * denovo77 BTPS35_13568 * N * 185 * * * * * denovo770 ITSPS35_12352 * N * 223 * * * * * denovo771 ITSPS35_5470 * N * 228 * * * * * denovo772 ITSPS35_13789 * N * 263 * * * * * denovo773 ITSPS35_204 * N * 306 * * * * * denovo774 ITSPS35_7083 * N * 251 * * * * * denovo775 ITSPS35_2493 * N * 295 * * * * * denovo776 ITSPS35_7324 * N * 190 * * * * * denovo777 ITSPS35_4059 * N * 225 * * * * * denovo778 ITSPS35_3992 * N * 176 * * * * * denovo779 ITSPS35_1004 * N * 161 * * * * * denovo78 ITSPS35_14365 * N * 456 * * * * * denovo780 ITSPS35_208 * L 608 799 * * * * * FJ801461_1_Phytophthora_kelmania_clone_WPC10613A777_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence * H 608 176 96.0 + 0 0 63I176M560I denovo781 ITSPS35_3417 FJ801461_1_Phytophthora_kelmania_clone_WPC10613A777_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence L 2100 799 * * * * * HQ643351_1_Phytophthora_sp_kelmania_voucher_CBS30762_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 2100 176 96.0 + 0 0 63I176M560I denovo781 ITSPS35_3417 HQ643351_1_Phytophthora_sp_kelmania_voucher_CBS30762_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 2383 828 * * * * * PD_00242_ITS_Phytophthora_cryptogea * H 2383 176 96.0 + 0 0 72I176M580I denovo781 ITSPS35_3417 PD_00242_ITS_Phytophthora_cryptogea N * 359 * * * * * denovo782 ITSPS35_16423 * N * 285 * * * * * denovo783 ITSPS35_12173 * N * 177 * * * * * denovo784 ITSPS35_16325 * N * 176 * * * * * denovo785 ITSPS35_3660 * N * 314 * * * * * denovo786 ITSPS35_6857 * N * 279 * * * * * denovo787 ITSPS35_1341 * N * 425 * * * * * denovo788 ITSPS35_12178 * N * 323 * * * * * denovo789 ITSPS35_182 * N * 304 * * * * * denovo79 ITSPS35_632 * N * 322 * * * * * denovo790 ITSPS35_11097 * N * 288 * * * * * denovo791 ITSPS35_2411 * N * 282 * * * * * denovo792 ITSPS35_7898 * N * 235 * * * * * denovo793 ITSPS35_3787 * N * 219 * * * * * denovo794 ITSPS35_386 * N * 299 * * * * * denovo795 ITSPS35_3785 * N * 152 * * * * * denovo796 ITSPS35_11227 * N * 361 * * * * * denovo797 ITSPS35_3780 * N * 514 * * * * * denovo798 ITSPS35_7853 * H 2723 346 93.1 + 0 0 22I115M3D84M3D106M14I35M251I denovo799 trnMPS35_358 trnm_P_europea_P10326_A59 H 2722 346 93.1 + 0 0 21I115M3D84M3D106M14I35M251I denovo799 trnMPS35_358 trnm_P_europea_P10325_A58 H 2721 346 93.1 + 0 0 22I115M3D84M3D106M14I35M251I denovo799 trnMPS35_358 trnm_P_europea_P10324_A57 N * 229 * * * * * denovo8 ITSPS35_12978 * N * 235 * * * * * denovo80 ITSPS35_2537 * N * 221 * * * * * denovo800 ITSPS35_4325 * N * 222 * * * * * denovo801 ITSPS35_388 * N * 219 * * * * * denovo802 ITSPS35_12553 * N * 229 * * * * * denovo803 ITSPS35_10192 * N * 147 * * * * * denovo804 ITSPS35_8955 * N * 232 * * * * * denovo805 ITSPS35_11554 * N * 209 * * * * * denovo806 ITSPS35_15571 * N * 324 * * * * * denovo807 ITSPS35_4607 * N * 274 * * * * * denovo808 ITSPS35_10327 * N * 144 * * * * * denovo809 BTPS35_13129 * N * 523 * * * * * denovo81 BTPS35_2640 * N * 249 * * * * * denovo810 ITSPS35_470 * N * 270 * * * * * denovo811 ITSPS35_7305 * N * 322 * * * * * denovo812 ITSPS35_8301 * N * 255 * * * * * denovo813 ITSPS35_5039 * N * 253 * * * * * denovo814 ITSPS35_7300 * N * 250 * * * * * denovo815 ITSPS35_8477 * N * 198 * * * * * denovo816 ITSPS35_14726 * N * 252 * * * * * denovo817 ITSPS35_284 * N * 232 * * * * * denovo818 ITSPS35_374 * N * 253 * * * * * denovo819 ITSPS35_6251 * N * 248 * * * * * denovo82 ITSPS35_5868 * N * 227 * * * * * denovo820 ITSPS35_6268 * N * 206 * * * * * denovo821 ITSPS35_16192 * N * 199 * * * * * denovo822 ITSPS35_4782 * N * 234 * * * * * denovo823 ITSPS35_11812 * N * 191 * * * * * denovo824 ITSPS35_11815 * N * 179 * * * * * denovo825 ITSPS35_16213 * N * 251 * * * * * denovo826 ITSPS35_13674 * N * 219 * * * * * denovo827 ITSPS35_5957 * N * 204 * * * * * denovo828 ITSPS35_8634 * N * 523 * * * * * denovo829 BTPS35_12650 * N * 222 * * * * * denovo83 ITSPS35_2960 * N * 222 * * * * * denovo830 ITSPS35_8493 * N * 226 * * * * * denovo831 ITSPS35_4107 * N * 279 * * * * * denovo832 ITSPS35_13331 * H 1541 236 100.0 + 0 0 1760I39MI197M2048I denovo833 ITSPS35_8395 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1520 236 99.6 + 0 0 1764I45M2I191M2047I denovo833 ITSPS35_8395 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 212 * * * * * denovo834 ITSPS35_8396 * N * 170 * * * * * denovo835 ITSPS35_14652 * N * 516 * * * * * denovo836 ITSPS35_7236 * N * 222 * * * * * denovo837 ITSPS35_8937 * H 1742 317 89.9 + 0 0 1761I52M15D250M1868I denovo838 ITSPS35_15313 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1527 317 87.1 + 0 0 D31M8D24M6D50MI72M3D22M4I100M601I denovo838 ITSPS35_15313 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 523 * * * * * denovo839 BTPS35_13222 * N * 317 * * * * * denovo84 ITSPS35_7050 * N * 303 * * * * * denovo840 ITSPS35_10555 * N * 166 * * * * * denovo841 ITSPS35_6327 * N * 402 * * * * * denovo842 ITSPS35_5889 * N * 181 * * * * * denovo843 ITSPS35_6325 * N * 298 * * * * * denovo844 ITSPS35_6515 * N * 208 * * * * * denovo845 ITSPS35_9546 * N * 181 * * * * * denovo846 ITSPS35_16356 * N * 423 * * * * * denovo847 ITSPS35_6459 * N * 236 * * * * * denovo848 ITSPS35_15290 * N * 261 * * * * * denovo849 ITSPS35_984 * N * 209 * * * * * denovo85 ITSPS35_2030 * N * 224 * * * * * denovo850 ITSPS35_154 * N * 210 * * * * * denovo851 ITSPS35_6457 * N * 207 * * * * * denovo852 ITSPS35_8013 * N * 212 * * * * * denovo853 ITSPS35_983 * N * 225 * * * * * denovo854 ITSPS35_6381 * N * 183 * * * * * denovo855 ITSPS35_7040 * N * 234 * * * * * denovo856 ITSPS35_13783 * H 1738 301 89.0 + 0 0 1769I100M10I58M12I34M3I89MI20M2016I denovo857 ITSPS35_11779 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 523 * * * * * denovo858 BTPS35_4731 * N * 165 * * * * * denovo859 ITSPS35_6630 * N * 289 * * * * * denovo86 ITSPS35_649 * N * 202 * * * * * denovo860 ITSPS35_11704 * N * 227 * * * * * denovo861 ITSPS35_1568 * N * 159 * * * * * denovo862 ITSPS35_2528 * N * 223 * * * * * denovo863 ITSPS35_13413 * N * 222 * * * * * denovo864 ITSPS35_1728 * L 2887 808 * * * * * PHYTOPHTHORA_CITROPHTHORA_CBS_111339_ITS * H 2887 257 99.2 + 0 0 257M551I denovo865 ITSPS35_11763 PHYTOPHTHORA_CITROPHTHORA_CBS_111339_ITS L 2886 792 * * * * * PHYTOPHTHORA_CITROPHTHORA_CBS_111338_ITS * H 2886 257 91.8 + 0 0 18D22MI56MI161M551I denovo865 ITSPS35_11763 PHYTOPHTHORA_CITROPHTHORA_CBS_111338_ITS N * 210 * * * * * denovo866 ITSPS35_16581 * N * 354 * * * * * denovo867 ITSPS35_16582 * N * 181 * * * * * denovo868 ITSPS35_2649 * N * 226 * * * * * denovo869 ITSPS35_4625 * N * 221 * * * * * denovo87 ITSPS35_2321 * N * 200 * * * * * denovo870 ITSPS35_726 * N * 235 * * * * * denovo871 ITSPS35_659 * N * 288 * * * * * denovo872 ITSPS35_1804 * N * 202 * * * * * denovo873 ITSPS35_9062 * N * 221 * * * * * denovo874 ITSPS35_14573 * N * 230 * * * * * denovo875 ITSPS35_7126 * N * 373 * * * * * denovo876 ITSPS35_14571 * N * 273 * * * * * denovo877 ITSPS35_8166 * N * 226 * * * * * denovo878 ITSPS35_124 * N * 254 * * * * * denovo879 ITSPS35_13894 * N * 269 * * * * * denovo88 ITSPS35_7113 * N * 253 * * * * * denovo880 ITSPS35_6884 * N * 226 * * * * * denovo881 ITSPS35_13944 * N * 167 * * * * * denovo882 ITSPS35_2934 * N * 272 * * * * * denovo883 ITSPS35_7772 * N * 206 * * * * * denovo884 ITSPS35_7770 * N * 331 * * * * * denovo885 ITSPS35_16457 * N * 165 * * * * * denovo886 ITSPS35_2635 * N * 236 * * * * * denovo887 ITSPS35_6975 * N * 234 * * * * * denovo888 ITSPS35_12653 * L 1551 4069 * * * * * AY598692_2_Pythium_grandisporangium_strain_CBS_286_79_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1551 237 80.6 + 0 0 1742I81M7I22M17I22M31I112M2035I denovo889 ITSPS35_6029 AY598692_2_Pythium_grandisporangium_strain_CBS_286_79_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 236 * * * * * denovo89 ITSPS35_7111 * L 2700 647 * * * * * TrnM_P_capsici_P10417_A488 * H 2700 340 99.1 + 0 0 23I305M20I35M264I denovo890 trnMPS35_645 TrnM_P_capsici_P10417_A488 L 2805 638 * * * * * trnm_P_sp_brasiliensis_P10452_A91 * H 2805 340 98.8 + 0 0 23I305M18I35M257I denovo890 trnMPS35_645 trnm_P_sp_brasiliensis_P10452_A91 L 2754 641 * * * * * trnm_P_meadi_P6128_A238 * H 2754 340 98.5 + 0 0 23I202MD102M20I35M259I denovo890 trnMPS35_645 trnm_P_meadi_P6128_A238 N * 259 * * * * * denovo891 ITSPS35_1650 * N * 189 * * * * * denovo892 ITSPS35_14189 * N * 196 * * * * * denovo893 ITSPS35_2187 * N * 158 * * * * * denovo894 ITSPS35_6188 * N * 194 * * * * * denovo895 ITSPS35_13092 * N * 211 * * * * * denovo896 ITSPS35_3606 * N * 351 * * * * * denovo897 ITSPS35_862 * N * 224 * * * * * denovo898 ITSPS35_13394 * N * 168 * * * * * denovo899 ITSPS35_14209 * N * 295 * * * * * denovo9 ITSPS35_10383 * H 2743 532 97.4 + 0 0 23I532M53I denovo90 trnMPS35_15267 trnm_P_kelmaniae_P10613_A777 H 2713 532 97.4 + 0 0 22I532M53I denovo90 trnMPS35_15267 trnm_P_cryptogea_GII_P3103_A27 L 2755 607 * * * * * trnm_P_medicaginis_P1678_A648 * H 2755 532 97.2 + 0 0 22I202MI330M52I denovo90 trnMPS35_15267 trnm_P_medicaginis_P1678_A648 N * 203 * * * * * denovo900 ITSPS35_13259 * N * 319 * * * * * denovo901 ITSPS35_1096 * N * 222 * * * * * denovo902 ITSPS35_1098 * N * 403 * * * * * denovo903 BTPS35_118 * N * 224 * * * * * denovo904 ITSPS35_3609 * N * 211 * * * * * denovo905 ITSPS35_11376 * N * 171 * * * * * denovo906 ITSPS35_5432 * N * 252 * * * * * denovo907 ITSPS35_5431 * N * 224 * * * * * denovo908 ITSPS35_9768 * N * 380 * * * * * denovo909 ITSPS35_9943 * N * 261 * * * * * denovo91 ITSPS35_13706 * H 1742 165 83.6 + 0 0 1887I44M11I121M1868I denovo910 ITSPS35_12618 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1527 165 84.2 + 0 0 118I30M2I15M15I20M4I100M601I denovo910 ITSPS35_12618 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence L 1728 813 * * * * * HQ643401_1_Phytopythium_sp_AL2010_voucher_CBS45562_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * H 1728 165 82.4 + 0 0 105I43MI122M542I denovo910 ITSPS35_12618 HQ643401_1_Phytopythium_sp_AL2010_voucher_CBS45562_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 402 * * * * * denovo911 ITSPS35_5438 * N * 308 * * * * * denovo912 ITSPS35_4925 * N * 182 * * * * * denovo913 ITSPS35_15000 * H 2713 532 98.5 + 0 0 22I532M53I denovo914 trnMPS35_10667 trnm_P_cryptogea_GII_P3103_A27 L 2810 609 * * * * * trnm_P_trifolii_P1462_A1951 * H 2810 532 98.1 + 0 0 23I202MI330M53I denovo914 trnMPS35_10667 trnm_P_trifolii_P1462_A1951 L 2811 607 * * * * * trnm_P_trifolii_P7010_A1039 * H 2811 532 98.1 + 0 0 21I202MI330M53I denovo914 trnMPS35_10667 trnm_P_trifolii_P7010_A1039 N * 313 * * * * * denovo915 ITSPS35_2800 * N * 269 * * * * * denovo916 ITSPS35_3954 * N * 307 * * * * * denovo917 ITSPS35_15008 * N * 300 * * * * * denovo918 ITSPS35_9160 * H 1742 312 84.3 + 0 0 1761I36M4D51M6D215M1868I denovo919 ITSPS35_16002 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 232 * * * * * denovo92 ITSPS35_9271 * N * 221 * * * * * denovo920 ITSPS35_865 * N * 180 * * * * * denovo921 ITSPS35_8242 * N * 238 * * * * * denovo922 ITSPS35_875 * N * 224 * * * * * denovo923 ITSPS35_1969 * N * 163 * * * * * denovo924 ITSPS35_877 * N * 238 * * * * * denovo925 ITSPS35_1470 * N * 222 * * * * * denovo926 ITSPS35_14844 * N * 260 * * * * * denovo927 ITSPS35_7171 * N * 218 * * * * * denovo928 ITSPS35_8267 * N * 220 * * * * * denovo929 ITSPS35_15587 * N * 304 * * * * * denovo93 ITSPS35_16416 * N * 159 * * * * * denovo930 ITSPS35_1575 * N * 249 * * * * * denovo931 ITSPS35_6894 * N * 162 * * * * * denovo932 ITSPS35_7957 * N * 245 * * * * * denovo933 ITSPS35_3458 * H 1742 207 89.9 + 0 0 1761I36M11I30M84I141M1868I denovo934 ITSPS35_2255 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence H 1527 207 84.5 + 0 0 D62M64I21M30I23M4I100M601I denovo934 ITSPS35_2255 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 301 * * * * * denovo935 ITSPS35_11192 * N * 149 * * * * * denovo936 ITSPS35_6899 * N * 173 * * * * * denovo937 ITSPS35_3107 * N * 252 * * * * * denovo938 ITSPS35_15074 * N * 210 * * * * * denovo939 ITSPS35_3194 * N * 199 * * * * * denovo94 ITSPS35_11522 * N * 187 * * * * * denovo940 ITSPS35_5643 * N * 215 * * * * * denovo941 ITSPS35_5645 * N * 270 * * * * * denovo942 ITSPS35_5803 * N * 308 * * * * * denovo943 ITSPS35_310 * N * 230 * * * * * denovo944 ITSPS35_11519 * N * 231 * * * * * denovo945 ITSPS35_11454 * N * 353 * * * * * denovo946 BTPS35_10880 * N * 215 * * * * * denovo947 ITSPS35_7460 * N * 500 * * * * * denovo948 ITSPS35_5077 * N * 427 * * * * * denovo949 ITSPS35_237 * N * 274 * * * * * denovo95 ITSPS35_8676 * N * 334 * * * * * denovo950 ITSPS35_11299 * N * 234 * * * * * denovo951 ITSPS35_232 * N * 165 * * * * * denovo952 ITSPS35_12578 * N * 152 * * * * * denovo953 ITSPS35_6809 * N * 311 * * * * * denovo954 ITSPS35_12049 * N * 263 * * * * * denovo955 ITSPS35_16313 * N * 319 * * * * * denovo956 ITSPS35_3551 * N * 231 * * * * * denovo957 ITSPS35_1274 * N * 287 * * * * * denovo958 ITSPS35_4378 * N * 201 * * * * * denovo959 ITSPS35_10613 * N * 283 * * * * * denovo96 ITSPS35_14062 * N * 263 * * * * * denovo960 ITSPS35_10505 * N * 272 * * * * * denovo961 ITSPS35_4175 * N * 186 * * * * * denovo962 ITSPS35_11859 * N * 148 * * * * * denovo963 ITSPS35_14502 * N * 263 * * * * * denovo964 ITSPS35_10285 * N * 183 * * * * * denovo965 ITSPS35_11854 * N * 195 * * * * * denovo966 ITSPS35_4074 * N * 169 * * * * * denovo967 ITSPS35_7786 * N * 225 * * * * * denovo968 ITSPS35_11874 * N * 233 * * * * * denovo969 ITSPS35_6525 * N * 223 * * * * * denovo97 ITSPS35_5030 * N * 298 * * * * * denovo970 ITSPS35_14751 * H 1738 292 93.5 + 0 0 1769I91M9I54M2D145M2044I denovo971 ITSPS35_340 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence N * 240 * * * * * denovo972 ITSPS35_15215 * N * 235 * * * * * denovo973 ITSPS35_11829 * N * 326 * * * * * denovo974 ITSPS35_349 * N * 174 * * * * * denovo975 ITSPS35_6970 * N * 352 * * * * * denovo976 ITSPS35_4777 * N * 241 * * * * * denovo977 ITSPS35_7701 * N * 194 * * * * * denovo978 ITSPS35_10289 * N * 147 * * * * * denovo979 ITSPS35_582 * N * 335 * * * * * denovo98 ITSPS35_4846 * N * 223 * * * * * denovo980 ITSPS35_587 * N * 275 * * * * * denovo981 ITSPS35_1377 * N * 211 * * * * * denovo982 ITSPS35_589 * N * 221 * * * * * denovo983 ITSPS35_1379 * N * 320 * * * * * denovo984 ITSPS35_12273 * N * 200 * * * * * denovo985 ITSPS35_15352 * N * 220 * * * * * denovo986 ITSPS35_15354 * N * 206 * * * * * denovo987 ITSPS35_10187 * N * 245 * * * * * denovo988 ITSPS35_425 * N * 252 * * * * * denovo989 ITSPS35_4458 * N * 230 * * * * * denovo99 ITSPS35_7500 * N * 211 * * * * * denovo990 ITSPS35_782 * N * 272 * * * * * denovo991 ITSPS35_4517 * N * 290 * * * * * denovo992 ITSPS35_72 * N * 322 * * * * * denovo993 ITSPS35_8998 * N * 311 * * * * * denovo994 ITSPS35_11927 * N * 233 * * * * * denovo995 ITSPS35_11924 * N * 284 * * * * * denovo996 ITSPS35_4294 * N * 225 * * * * * denovo997 ITSPS35_2070 * N * 235 * * * * * denovo998 ITSPS35_8437 * N * 551 * * * * * denovo999 BTPS35_12102 * D 487 3 * * * * 98.4 AJ854289_1_Phytophthora_cactorum_18S_rRNA_gene_partial_5_8S_rRNA_gene_28S_rRNA_gene_partial_ITS1_and_ITS2_isolate_Fr_an_1 * D 614 2 * * * * 95.5 KF286884_1_Phytophthora_lacustris_strain_IBL554_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 630 2 * * * * 87.7 AY995387_1_Phytophthora_medicaginis_x_cryptogea_isolate_P71_B11b_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 756 5 * * * * 94.6 KJ755195_1_Phytophthora_taxon_Pgchlamydo_voucher_IMI389731_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_and_5_8S_ribosomal_RNA_gene_complete_sequence_and_internal_transcribed_spacer_2_partial_sequence * D 770 3 * * * * 89.8 AY598708_2_Phytophthora_undulata_strain_CBS_157_69_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1311 2 * * * * 97.6 EF406093_1_Pythium_sterilum_isolate_WD41a45_cytochrome_c_oxidase_subunit_I_coxI_gene_partial_cds_mitochondrial * D 1520 5 * * * * 92.6 AY598633_2_Pythium_coloratum_strain_CBS_154_64_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1527 2 * * * * 84.2 HQ237483_1_Pythium_cucurbitacearum_isolate_1241Pc_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1541 4 * * * * 96.0 AY598634_2_Pythium_dissotocum_strain_CBS_166_68_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1546 3 * * * * 85.5 AY598691_2_Pythium_flevoense_strain_CBS_234_72_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1551 2 * * * * 80.6 AY598692_2_Pythium_grandisporangium_strain_CBS_286_79_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1650 2 * * * * 81.2 AY598630_2_Pythium_salpingophorum_strain_CBS_471_50_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1672 2 * * * * 84.1 AY598645_2_Pythium_sylvaticum_strain_CBS_453_67_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1736 2 * * * * 88.2 HQ643373_2_Phytopythium_carbonicum_voucher_CBS112544_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1738 10 * * * * 93.1 HQ643386_2_Phytopythium_litorale_voucher_CBS118360_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 1742 15 * * * * 87.6 HQ643400_2_Phytopythium_vexans_voucher_CBS11980_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 2383 2 * * * * 96.0 PD_00242_ITS_Phytophthora_cryptogea * D 2386 2 * * * * 88.8 PD_02697_ITS_Phytophthora_cryptogea * D 2700 2 * * * * 99.1 TrnM_P_capsici_P10417_A488 * D 2708 4 * * * * 97.9 trnm_P_cinnammomi_P3232_A195 * D 2713 5 * * * * 97.3 trnm_P_cryptogea_GII_P3103_A27 * D 2721 2 * * * * 93.1 trnm_P_europea_P10324_A57 * D 2723 2 * * * * 95.1 trnm_P_europea_P10326_A59 * D 2887 2 * * * * 99.2 PHYTOPHTHORA_CITROPHTHORA_CBS_111339_ITS * D 3777 2 * * * * 95.2 HQ643476_2_Pythium_attrantheridium_voucher_DAOM230386_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence * D 3780 2 * * * * 98.9 HQ643761_2_Pythium_rostratifingens_voucher_CBS115464_18S_ribosomal_RNA_gene_partial_sequence_internal_transcribed_spacer_1_5_8S_ribosomal_RNA_gene_and_internal_transcribed_spacer_2_complete_sequence_and_28S_ribosomal_RNA_gene_partial_sequence *