QIIME version: 1.9.1

qiime_config values:
pick_otus_reference_seqs_fp     /home/obrett/my_env/lib/python2.7/site-packages/qiime_default_reference/gg_13_8_otus/rep_set/97_otus.fasta
sc_queue        all.q
pynast_template_alignment_fp    /home/obrett/my_env/lib/python2.7/site-packages/qiime_default_reference/gg_13_8_otus/rep_set_aligned/85_otus.pynast.fasta
cluster_jobs_fp start_parallel_jobs.py
assign_taxonomy_reference_seqs_fp       /home/obrett/my_env/lib/python2.7/site-packages/qiime_default_reference/gg_13_8_otus/rep_set/97_otus.fasta
torque_queue    friendlyq
jobs_to_start   1
denoiser_min_per_core   50
assign_taxonomy_id_to_taxonomy_fp       /home/obrett/my_env/lib/python2.7/site-packages/qiime_default_reference/gg_13_8_otus/taxonomy/97_otu_taxonomy.txt
temp_dir        /tmp/
blastall_fp     blastall
seconds_to_sleep        1

parameter file values:
assign_taxonomy:reference_seqs_fp       /home/obrett/UNITE2/parsed_97_dynamic.fasta
assign_taxonomy:id_to_taxonomy_fp       /home/obrett/UNITE2/parsed_97_dynamic.txt
assign_taxonomy:assignment_method       blast
pick_open_reference_otus:prefilter_refseqs_fp   /home/obrett/UNITE2/parsed_97_dynamic.fasta
pick_open_reference_otus:suppress_align_and_tree        True
pick_open_reference_otus:prefilter_percent_id   0.6
pick_otus:enable_rev_strand_match       True
parallel:jobs_to_start  1

Input file md5 sums:
filtered_R1.fasta: 5235176b0afb03fb24d78b5d84635e7f
/home/obrett/UNITE2/parsed_97_dynamic.fasta: 4e0eeab324b29af191bc2712a31f2b82

Forcing --suppress_new_clusters as this is reference-based OTU picking.

Executing commands.

*** ERROR RAISED DURING STEP: Assign taxonomy
Command run was:
 assign_taxonomy.py -o open_reference_otus6/blast_assigned_taxonomy -i open_reference_otus6/rep_set.fna --reference_seqs_fp /home/obrett/UNITE2/parsed_97_dynamic.fasta --id_to_taxonomy_fp /home/obrett/UNITE2/parsed_97_dynamic.txt --assignment_method blast
 Command returned exit status: 1
Stdout:

Stderr
Traceback (most recent call last):
  File "/home/obrett/my_env/bin/assign_taxonomy.py", line 417, in <module>
    main()
  File "/home/obrett/my_env/bin/assign_taxonomy.py", line 394, in main
    log_path=log_path)
  File "/home/obrett/my_env/lib/python2.7/site-packages/qiime/assign_taxonomy.py", line 500, in __call__
    abspath(reference_seqs_path), output_dir=blast_db_dir)
  File "/home/obrett/my_env/lib/python2.7/site-packages/bfillings/formatdb.py", line 121, in build_blast_db_from_fasta_path
    app_result = fdb(fasta_path)
  File "/home/obrett/my_env/lib/python2.7/site-packages/burrito/util.py", line 285, in __call__
    'StdErr:\n%s\n' % open(errfile).read())
burrito.util.ApplicationError: Unacceptable application exit status: 126
Command:
cd "/tmp/bltax-kbMKet/"; formatdb -l "parsed_97_dynamic.fasta.log" -o T -n "parsed_97_dynamic.fasta" -i "/home/obrett/UNITE2/parsed_97_dynamic.fasta" -p F > "/dev/null" 2> "/dev/null"
StdOut:

StdErr: