This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by PLUMED configure 2, which was
generated by GNU Autoconf 2.69.  Invocation command line was

  $ ./configure --prefix=/home/acusers/pbalaji/install/plumed-2.4.1 LDFLAGS=-L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt CPPFLAGS=-I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ CXX=/home/apps/ics/impi/latest/bin64/mpicxx --enable-mpi --enable-external-blas --enable-external-lapack --enable-shared CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK -mt_mpi

## --------- ##
## Platform. ##
## --------- ##

hostname = hn1
uname -m = x86_64
uname -r = 2.6.32-131.0.15.el6.x86_64
uname -s = Linux
uname -v = #1 SMP Tue May 10 15:42:40 EDT 2011

/usr/bin/uname -p = unknown
/bin/uname -X     = unknown

/bin/arch              = x86_64
/usr/bin/arch -k       = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo      = unknown
/bin/machine           = unknown
/usr/bin/oslevel       = unknown
/bin/universe          = unknown

PATH: /home/acusers/pbalaji/install/xdrfile/bin
PATH: /home/acusers/pbalaji/install/fftw-3.3.7/bin
PATH: /home/acusers/pbalaji/install/libiconv-1.15/bin
PATH: /home/acusers/pbalaji/install/libtool-2.4/bin
PATH: /home/acusers/pbalaji/install/cmake-3.11.3/bin
PATH: /home/acusers/pbalaji/install/gcc-5.5.0/bin
PATH: /home/apps/ics/impi/latest/bin64
PATH: /home/acusers/pbalaji/install/gromacs-514-impi/bin
PATH: /usr/lib64/qt-3.3/bin
PATH: /bin
PATH: /usr/bin
PATH: /usr/local/sbin
PATH: /usr/sbin
PATH: /sbin
PATH: /home/acusers/pbalaji/bin


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2378: Optional modules are disabled by default
configure:3150: checking for C++ compiler version
configure:3159: /home/apps/ics/impi/latest/bin64/mpicxx --version >&5
g++ (GCC) 5.5.0
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3170: $? = 0
configure:3159: /home/apps/ics/impi/latest/bin64/mpicxx -v >&5
mpigxx for the Intel(R) MPI Library 4.1 for Linux*
Copyright(C) 2003-2014, Intel Corporation.  All rights reserved.
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/home/acusers/pbalaji/install/gcc-5.5.0/libexec/gcc/x86_64-unknown-linux-gnu/5.5.0/lto-wrapper
Target: x86_64-unknown-linux-gnu
Configured with: ./configure --prefix=/home/acusers/pbalaji/install/gcc-5.5.0 --with-gmp=/home/acusers/pbalaji/install/gmp-6.1.2/ --with-mpfr=/home/acusers/pbalaji/install/mpfr-4.0.1/ --with-mpc=/home/acusers/pbalaji/install/mpc-1.1.0/ --with-isl=/home/acusers/pbalaji/install/isl_mine/ --enable-stage1-languages=all --enable-libada --enable-lipssp
Thread model: posix
gcc version 5.5.0 (GCC) 
configure:3170: $? = 0
configure:3159: /home/apps/ics/impi/latest/bin64/mpicxx -V >&5
g++: error: unrecognized command line option '-V'
configure:3170: $? = 1
configure:3159: /home/apps/ics/impi/latest/bin64/mpicxx -qversion >&5
g++: error: unrecognized command line option '-qversion'
configure:3170: $? = 1
configure:3190: checking whether the C++ compiler works
configure:3212: /home/apps/ics/impi/latest/bin64/mpicxx -DMPICH_IGNORE_CXX_SEEK -mt_mpi -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:3216: $? = 0
configure:3264: result: yes
configure:3267: checking for C++ compiler default output file name
configure:3269: result: a.out
configure:3275: checking for suffix of executables
configure:3282: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:3286: $? = 0
configure:3308: result: 
configure:3330: checking whether we are cross compiling
configure:3338: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:3342: $? = 0
configure:3349: ./conftest
configure:3353: $? = 0
configure:3368: result: no
configure:3373: checking for suffix of object files
configure:3395: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:3399: $? = 0
configure:3420: result: o
configure:3424: checking whether we are using the GNU C++ compiler
configure:3443: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:3443: $? = 0
configure:3452: result: yes
configure:3461: checking whether /home/apps/ics/impi/latest/bin64/mpicxx accepts -g
configure:3481: /home/apps/ics/impi/latest/bin64/mpicxx -c -g -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:3481: $? = 0
configure:3522: result: yes
configure:3595: checking for gcc
configure:3611: found /home/acusers/pbalaji/install/gcc-5.5.0/bin/gcc
configure:3622: result: gcc
configure:3851: checking for C compiler version
configure:3860: gcc --version >&5
gcc (GCC) 5.5.0
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3871: $? = 0
configure:3860: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/home/acusers/pbalaji/install/gcc-5.5.0/libexec/gcc/x86_64-unknown-linux-gnu/5.5.0/lto-wrapper
Target: x86_64-unknown-linux-gnu
Configured with: ./configure --prefix=/home/acusers/pbalaji/install/gcc-5.5.0 --with-gmp=/home/acusers/pbalaji/install/gmp-6.1.2/ --with-mpfr=/home/acusers/pbalaji/install/mpfr-4.0.1/ --with-mpc=/home/acusers/pbalaji/install/mpc-1.1.0/ --with-isl=/home/acusers/pbalaji/install/isl_mine/ --enable-stage1-languages=all --enable-libada --enable-lipssp
Thread model: posix
gcc version 5.5.0 (GCC) 
configure:3871: $? = 0
configure:3860: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:3871: $? = 1
configure:3860: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:3871: $? = 1
configure:3875: checking whether we are using the GNU C compiler
configure:3894: gcc -c  -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.c >&5
configure:3894: $? = 0
configure:3903: result: yes
configure:3912: checking whether gcc accepts -g
configure:3932: gcc -c -g -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.c >&5
configure:3932: $? = 0
configure:3973: result: yes
configure:3990: checking for gcc option to accept ISO C89
configure:4053: gcc  -c -g -O2 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.c >&5
configure:4053: $? = 0
configure:4066: result: none needed
configure:4144: checking for gfortran
configure:4160: found /home/acusers/pbalaji/install/gcc-5.5.0/bin/gfortran
configure:4171: result: gfortran
configure:4197: checking for Fortran compiler version
configure:4206: gfortran --version >&5
GNU Fortran (GCC) 5.5.0
Copyright (C) 2015 Free Software Foundation, Inc.

GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING

configure:4217: $? = 0
configure:4206: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/home/acusers/pbalaji/install/gcc-5.5.0/libexec/gcc/x86_64-unknown-linux-gnu/5.5.0/lto-wrapper
Target: x86_64-unknown-linux-gnu
Configured with: ./configure --prefix=/home/acusers/pbalaji/install/gcc-5.5.0 --with-gmp=/home/acusers/pbalaji/install/gmp-6.1.2/ --with-mpfr=/home/acusers/pbalaji/install/mpfr-4.0.1/ --with-mpc=/home/acusers/pbalaji/install/mpc-1.1.0/ --with-isl=/home/acusers/pbalaji/install/isl_mine/ --enable-stage1-languages=all --enable-libada --enable-lipssp
Thread model: posix
gcc version 5.5.0 (GCC) 
configure:4217: $? = 0
configure:4206: gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:4217: $? = 1
configure:4206: gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:4217: $? = 1
configure:4226: checking whether we are using the GNU Fortran compiler
configure:4239: gfortran -c   conftest.F >&5
configure:4239: $? = 0
configure:4248: result: yes
configure:4254: checking whether gfortran accepts -g
configure:4265: gfortran -c -g  conftest.f >&5
configure:4265: $? = 0
configure:4273: result: yes
configure:4314: Initial CXX:         /home/apps/ics/impi/latest/bin64/mpicxx
configure:4316: Initial CXXFLAGS:    -DMPICH_IGNORE_CXX_SEEK -mt_mpi
configure:4318: Initial CPPFLAGS:    -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/
configure:4320: Initial CFLAGS:      -g -O2
configure:4322: Initial LDFLAGS:     -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt
configure:4324: Initial LIBS:        
configure:4326: Initial STATIC_LIBS: 
configure:4328: Initial LD:          /home/apps/ics/impi/latest/bin64/mpicxx
configure:4330: Initial LDSHARED:    /home/apps/ics/impi/latest/bin64/mpicxx
configure:4332: Initial SOEXT:       
configure:4342: checking whether /home/apps/ics/impi/latest/bin64/mpicxx accepts -fPIC
configure:4355: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:4355: $? = 0
configure:4368: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:4368: $? = 0
configure:4369: result: yes
configure:4395: checking whether gcc accepts -fPIC
configure:4408: gcc -c -g -O2 -fPIC -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.c >&5
configure:4408: $? = 0
configure:4421: gcc -o conftest -g -O2 -fPIC -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.c  >&5
configure:4421: $? = 0
configure:4422: result: yes
configure:4451: checking whether /home/apps/ics/impi/latest/bin64/mpicxx accepts -Wall
configure:4464: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:4464: $? = 0
configure:4477: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:4477: $? = 0
configure:4478: result: yes
configure:4497: checking whether /home/apps/ics/impi/latest/bin64/mpicxx accepts -pedantic
configure:4510: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:4510: $? = 0
configure:4523: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:4523: $? = 0
configure:4524: result: yes
configure:4543: checking whether /home/apps/ics/impi/latest/bin64/mpicxx accepts -std=c++11
configure:4556: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:4556: $? = 0
configure:4569: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:4569: $? = 0
configure:4570: result: yes
configure:5155: checking whether /home/apps/ics/impi/latest/bin64/mpicxx declares c++11 support
configure:5172: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5172: $? = 0
configure:5173: result: yes
configure:5199: checking whether /home/apps/ics/impi/latest/bin64/mpicxx can generate dependency file with -MM -MF
configure:5208: result: yes
configure:5224: dependency tracking enabled
configure:5233: Now we will check compulsory headers and libraries
configure:5240: checking how to run the C++ preprocessor
configure:5267: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:5267: $? = 0
configure:5281: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
conftest.cpp:9:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:5281: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:5306: result: /home/apps/ics/impi/latest/bin64/mpicxx -E
configure:5326: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:5326: $? = 0
configure:5340: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
conftest.cpp:9:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:5340: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:5369: checking for grep that handles long lines and -e
configure:5427: result: /bin/grep
configure:5432: checking for egrep
configure:5494: result: /bin/grep -E
configure:5499: checking for ANSI C header files
configure:5519: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5519: $? = 0
configure:5592: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:5592: $? = 0
configure:5592: ./conftest
configure:5592: $? = 0
configure:5603: result: yes
configure:5616: checking for sys/types.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5616: checking for sys/stat.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5616: checking for stdlib.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5616: checking for string.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5616: checking for memory.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5616: checking for strings.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5616: checking for inttypes.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5616: checking for stdint.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5616: checking for unistd.h
configure:5616: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5616: $? = 0
configure:5616: result: yes
configure:5628: checking dirent.h usability
configure:5628: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:5628: $? = 0
configure:5628: result: yes
configure:5628: checking dirent.h presence
configure:5628: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:5628: $? = 0
configure:5628: result: yes
configure:5628: checking for dirent.h
configure:5628: result: yes
configure:5636: checking for readdir
configure:5636: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
configure:5636: $? = 0
configure:5636: result: yes
configure:5663: checking for library containing dgemv
configure:5694: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
/tmp/ccnI0z7V.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `dgemv'
collect2: error: ld returned 1 exit status
configure:5694: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char dgemv ();
| int
| main ()
| {
| return dgemv ();
|   ;
|   return 0;
| }
configure:5694: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lblas   >&5
/tmp/ccSsFJJ9.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `dgemv'
collect2: error: ld returned 1 exit status
configure:5694: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char dgemv ();
| int
| main ()
| {
| return dgemv ();
|   ;
|   return 0;
| }
configure:5711: result: no
configure:5721: checking for library containing dgemv_
configure:5752: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp  >&5
/tmp/ccJ9vRkn.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `dgemv_'
collect2: error: ld returned 1 exit status
configure:5752: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char dgemv_ ();
| int
| main ()
| {
| return dgemv_ ();
|   ;
|   return 0;
| }
configure:5752: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lblas   >&5
configure:5752: $? = 0
configure:5769: result: -lblas
configure:6041: checking for library containing dsyevr_
configure:6072: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lblas  >&5
/tmp/ccnJP1CB.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `dsyevr_'
collect2: error: ld returned 1 exit status
configure:6072: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char dsyevr_ ();
| int
| main ()
| {
| return dsyevr_ ();
|   ;
|   return 0;
| }
configure:6072: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -llapack  -lblas  >&5
configure:6072: $? = 0
configure:6090: result: -llapack
configure:6186: checking whether sdot returns float
configure:6219: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -llapack -lblas  >&5
conftest.cpp: In function 'int main()':
conftest.cpp:33:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(unsigned i=0;i<size;i++){
                     ^
configure:6219: $? = 0
configure:6219: ./conftest
configure:6219: $? = 0
configure:6220: result: yes
configure:6305: Now we will check for optional headers and libraries
configure:6329: checking libmolfile_plugin.h usability
configure:6329: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
conftest.cpp:55:31: fatal error: libmolfile_plugin.h: No such file or directory
compilation terminated.
configure:6329: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| #define __PLUMED_HAS_EXTERNAL_LAPACK 1
| #define __PLUMED_HAS_MOLFILE_PLUGINS 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <libmolfile_plugin.h>
configure:6329: result: no
configure:6329: checking libmolfile_plugin.h presence
configure:6329: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
conftest.cpp:22:31: fatal error: libmolfile_plugin.h: No such file or directory
compilation terminated.
configure:6329: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| #define __PLUMED_HAS_EXTERNAL_LAPACK 1
| #define __PLUMED_HAS_MOLFILE_PLUGINS 1
| /* end confdefs.h.  */
| #include <libmolfile_plugin.h>
configure:6329: result: no
configure:6329: checking for libmolfile_plugin.h
configure:6329: result: no
configure:6458: WARNING: cannot enable __PLUMED_HAS_EXTERNAL_MOLFILE_PLUGINS
configure:6463: WARNING: using internal molfile_plugins, which only support dcd/xtc/trr/trj/crd files
configure:6475: checking for dlopen in -ldl
configure:6500: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -ldl  -llapack -lblas  >&5
configure:6500: $? = 0
configure:6509: result: yes
configure:6522: checking mpi.h usability
configure:6522: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:6522: $? = 0
configure:6522: result: yes
configure:6522: checking mpi.h presence
configure:6522: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:6522: $? = 0
configure:6522: result: yes
configure:6522: checking for mpi.h
configure:6522: result: yes
configure:6527: checking for library containing MPI_Init
configure:6558: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -ldl -llapack -lblas  >&5
configure:6558: $? = 0
configure:6575: result: none required
configure:6672: checking for /home/apps/ics/impi/latest/bin64/mpicxx option to support OpenMP
configure:6687: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -ldl -llapack -lblas  >&5
conftest.cpp:25:2: error: 'choke' does not name a type
  choke me
  ^
In file included from conftest.cpp:27:0:
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:39:3: error: 'omp_lock_t' does not name a type
 } omp_lock_t;
   ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:86:28: error: variable or field 'omp_init_lock' declared void
 extern void omp_init_lock (omp_lock_t *) __GOMP_NOTHROW;
                            ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:86:28: error: 'omp_lock_t' was not declared in this scope
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:86:40: error: expected primary-expression before ')' token
 extern void omp_init_lock (omp_lock_t *) __GOMP_NOTHROW;
                                        ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:87:31: error: variable or field 'omp_destroy_lock' declared void
 extern void omp_destroy_lock (omp_lock_t *) __GOMP_NOTHROW;
                               ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:87:31: error: 'omp_lock_t' was not declared in this scope
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:87:43: error: expected primary-expression before ')' token
 extern void omp_destroy_lock (omp_lock_t *) __GOMP_NOTHROW;
                                           ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:88:27: error: variable or field 'omp_set_lock' declared void
 extern void omp_set_lock (omp_lock_t *) __GOMP_NOTHROW;
                           ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:88:27: error: 'omp_lock_t' was not declared in this scope
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:88:39: error: expected primary-expression before ')' token
 extern void omp_set_lock (omp_lock_t *) __GOMP_NOTHROW;
                                       ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:89:29: error: variable or field 'omp_unset_lock' declared void
 extern void omp_unset_lock (omp_lock_t *) __GOMP_NOTHROW;
                             ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:89:29: error: 'omp_lock_t' was not declared in this scope
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:89:41: error: expected primary-expression before ')' token
 extern void omp_unset_lock (omp_lock_t *) __GOMP_NOTHROW;
                                         ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:90:27: error: 'omp_lock_t' was not declared in this scope
 extern int omp_test_lock (omp_lock_t *) __GOMP_NOTHROW;
                           ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:90:39: error: expected primary-expression before ')' token
 extern int omp_test_lock (omp_lock_t *) __GOMP_NOTHROW;
                                       ^
/home/acusers/pbalaji/install/gcc-5.5.0/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/include/omp.h:90:41: error: expected ',' or ';' before 'throw'
 extern int omp_test_lock (omp_lock_t *) __GOMP_NOTHROW;
                                         ^
configure:6687: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| #define __PLUMED_HAS_EXTERNAL_LAPACK 1
| #define __PLUMED_HAS_MOLFILE_PLUGINS 1
| #define __PLUMED_HAS_MPI 1
| /* end confdefs.h.  */
| 
| #ifndef _OPENMP
|  choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
| 
configure:6705: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -fopenmp -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -ldl -llapack -lblas  >&5
configure:6705: $? = 0
configure:6719: result: -fopenmp
configure:6735: checking matheval.h usability
configure:6735: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:6735: $? = 0
configure:6735: result: yes
configure:6735: checking matheval.h presence
configure:6735: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:6735: $? = 0
configure:6735: result: yes
configure:6735: checking for matheval.h
configure:6735: result: yes
configure:6740: checking for library containing evaluator_create
configure:6771: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -ldl -llapack -lblas  >&5
/tmp/ccL3vKyK.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `evaluator_create'
collect2: error: ld returned 1 exit status
configure:6771: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| #define __PLUMED_HAS_EXTERNAL_LAPACK 1
| #define __PLUMED_HAS_MOLFILE_PLUGINS 1
| #define __PLUMED_HAS_MPI 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char evaluator_create ();
| int
| main ()
| {
| return evaluator_create ();
|   ;
|   return 0;
| }
configure:6771: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lmatheval  -ldl -llapack -lblas  >&5
configure:6771: $? = 0
configure:6788: result: -lmatheval
configure:6873: checking for dirent.h
configure:6873: result: yes
configure:6878: checking for library containing readdir_r
configure:6909: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lmatheval -ldl -llapack -lblas  >&5
configure:6909: $? = 0
configure:6926: result: none required
configure:7011: checking regex.h usability
configure:7011: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:7011: $? = 0
configure:7011: result: yes
configure:7011: checking regex.h presence
configure:7011: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:7011: $? = 0
configure:7011: result: yes
configure:7011: checking for regex.h
configure:7011: result: yes
configure:7016: checking for library containing regcomp
configure:7047: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lmatheval -ldl -llapack -lblas  >&5
configure:7047: $? = 0
configure:7064: result: none required
configure:7149: checking dlfcn.h usability
configure:7149: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:7149: $? = 0
configure:7149: result: yes
configure:7149: checking dlfcn.h presence
configure:7149: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:7149: $? = 0
configure:7149: result: yes
configure:7149: checking for dlfcn.h
configure:7149: result: yes
configure:7154: checking for library containing dlopen
configure:7185: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lmatheval -ldl -llapack -lblas  >&5
configure:7185: $? = 0
configure:7202: result: none required
configure:7287: checking execinfo.h usability
configure:7287: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:7287: $? = 0
configure:7287: result: yes
configure:7287: checking execinfo.h presence
configure:7287: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:7287: $? = 0
configure:7287: result: yes
configure:7287: checking for execinfo.h
configure:7287: result: yes
configure:7292: checking for library containing backtrace
configure:7323: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lmatheval -ldl -llapack -lblas  >&5
configure:7323: $? = 0
configure:7340: result: none required
configure:7425: checking zlib.h usability
configure:7425: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:7425: $? = 0
configure:7425: result: yes
configure:7425: checking zlib.h presence
configure:7425: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:7425: $? = 0
configure:7425: result: yes
configure:7425: checking for zlib.h
configure:7425: result: yes
configure:7430: checking for library containing gzopen
configure:7461: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lmatheval -ldl -llapack -lblas  >&5
/tmp/cc8TIKNJ.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `gzopen'
collect2: error: ld returned 1 exit status
configure:7461: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| #define __PLUMED_HAS_EXTERNAL_LAPACK 1
| #define __PLUMED_HAS_MOLFILE_PLUGINS 1
| #define __PLUMED_HAS_MPI 1
| #define __PLUMED_HAS_MATHEVAL 1
| #define __PLUMED_HAS_READDIR_R 1
| #define __PLUMED_HAS_CREGEX 1
| #define __PLUMED_HAS_DLOPEN 1
| #define __PLUMED_HAS_EXECINFO 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char gzopen ();
| int
| main ()
| {
| return gzopen ();
|   ;
|   return 0;
| }
configure:7461: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lz  -lmatheval -ldl -llapack -lblas  >&5
configure:7461: $? = 0
configure:7478: result: -lz
configure:7564: checking for library containing cblas_dgemv
configure:7595: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lz -lmatheval -ldl -llapack -lblas  >&5
/tmp/ccq17w40.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `cblas_dgemv'
collect2: error: ld returned 1 exit status
configure:7595: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| #define __PLUMED_HAS_EXTERNAL_LAPACK 1
| #define __PLUMED_HAS_MOLFILE_PLUGINS 1
| #define __PLUMED_HAS_MPI 1
| #define __PLUMED_HAS_MATHEVAL 1
| #define __PLUMED_HAS_READDIR_R 1
| #define __PLUMED_HAS_CREGEX 1
| #define __PLUMED_HAS_DLOPEN 1
| #define __PLUMED_HAS_EXECINFO 1
| #define __PLUMED_HAS_ZLIB 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char cblas_dgemv ();
| int
| main ()
| {
| return cblas_dgemv ();
|   ;
|   return 0;
| }
configure:7595: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lgslcblas  -lz -lmatheval -ldl -llapack -lblas  >&5
configure:7595: $? = 0
configure:7612: result: -lgslcblas
configure:7618: checking gsl/gsl_vector.h usability
configure:7618: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:7618: $? = 0
configure:7618: result: yes
configure:7618: checking gsl/gsl_vector.h presence
configure:7618: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:7618: $? = 0
configure:7618: result: yes
configure:7618: checking for gsl/gsl_vector.h
configure:7618: result: yes
configure:7623: checking for library containing gsl_vector_alloc
configure:7654: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lgslcblas -lz -lmatheval -ldl -llapack -lblas  >&5
/tmp/ccXD6t4E.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `gsl_vector_alloc'
collect2: error: ld returned 1 exit status
configure:7654: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| #define __PLUMED_HAS_EXTERNAL_LAPACK 1
| #define __PLUMED_HAS_MOLFILE_PLUGINS 1
| #define __PLUMED_HAS_MPI 1
| #define __PLUMED_HAS_MATHEVAL 1
| #define __PLUMED_HAS_READDIR_R 1
| #define __PLUMED_HAS_CREGEX 1
| #define __PLUMED_HAS_DLOPEN 1
| #define __PLUMED_HAS_EXECINFO 1
| #define __PLUMED_HAS_ZLIB 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char gsl_vector_alloc ();
| int
| main ()
| {
| return gsl_vector_alloc ();
|   ;
|   return 0;
| }
configure:7654: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lgsl  -lgslcblas -lz -lmatheval -ldl -llapack -lblas  >&5
configure:7654: $? = 0
configure:7671: result: -lgsl
configure:7942: checking xdrfile/xdrfile_xtc.h usability
configure:7942: /home/apps/ics/impi/latest/bin64/mpicxx -c -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp >&5
configure:7942: $? = 0
configure:7942: result: yes
configure:7942: checking xdrfile/xdrfile_xtc.h presence
configure:7942: /home/apps/ics/impi/latest/bin64/mpicxx -E -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ conftest.cpp
configure:7942: $? = 0
configure:7942: result: yes
configure:7942: checking for xdrfile/xdrfile_xtc.h
configure:7942: result: yes
configure:7947: checking for library containing write_xtc
configure:7978: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lgsl -lgslcblas -lz -lmatheval -ldl -llapack -lblas  >&5
/tmp/cc1yIC88.o: In function `main':
conftest.cpp:(.text+0x5): undefined reference to `write_xtc'
collect2: error: ld returned 1 exit status
configure:7978: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "PLUMED"
| #define PACKAGE_TARNAME "plumed"
| #define PACKAGE_VERSION "2"
| #define PACKAGE_STRING "PLUMED 2"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __PLUMED_HAS_EXTERNAL_BLAS 1
| #define __PLUMED_HAS_EXTERNAL_LAPACK 1
| #define __PLUMED_HAS_MOLFILE_PLUGINS 1
| #define __PLUMED_HAS_MPI 1
| #define __PLUMED_HAS_MATHEVAL 1
| #define __PLUMED_HAS_READDIR_R 1
| #define __PLUMED_HAS_CREGEX 1
| #define __PLUMED_HAS_DLOPEN 1
| #define __PLUMED_HAS_EXECINFO 1
| #define __PLUMED_HAS_ZLIB 1
| #define __PLUMED_HAS_GSL 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char write_xtc ();
| int
| main ()
| {
| return write_xtc ();
|   ;
|   return 0;
| }
configure:7978: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt conftest.cpp -lxdrfile  -lgsl -lgslcblas -lz -lmatheval -ldl -llapack -lblas  >&5
configure:7978: $? = 0
configure:7995: result: -lxdrfile
configure:8341: Release mode, adding -DNDEBUG
configure:8356: Enabling c++ exceptions -D__PLUMED_HAS_EXCEPTIONS
configure:8394: *** Special settings for dynamic libraries on Linux ***
configure:8396: Dynamic library extension is 'so'
configure:8398: LDSHARED and LDFLAGS need special flags
configure:8405: checking whether LDFLAGS can contain -rdynamic
configure:8418: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt -rdynamic conftest.cpp -lxdrfile -lgsl -lgslcblas -lz -lmatheval -ldl -llapack -lblas  >&5
configure:8418: $? = 0
configure:8419: result: yes
configure:8438: Using LDSHARED='/home/apps/ics/impi/latest/bin64/mpicxx -shared'
configure:8440: Using LDFLAGS='-L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt -rdynamic'
configure:8442: checking whether LDSHARED can create dynamic libraries
configure:8453: result: no
configure:8455: WARNING: dynamic library will be disabled
configure:8527: checking for doxygen
configure:8543: found /usr/bin/doxygen
configure:8554: result: found
configure:8570: WARNING: Doxygen version is <1.8
configure:8576: checking for dot
configure:8606: result: no
configure:8613: WARNING: You will not be able to see diagrams in the manual
configure:8626: Manuals will not be generated
configure:8638: A PDF version of the manual will not be generated
configure:8646: checking for xxd
configure:8662: found /usr/bin/xxd
configure:8673: result: found
configure:8688: checking whether a program can be run on this machine
configure:8715: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt -rdynamic conftest.cpp -lxdrfile -lgsl -lgslcblas -lz -lmatheval -ldl -llapack -lblas  >&5
configure:8715: $? = 0
configure:8715: ./conftest
configure:8715: $? = 0
configure:8716: result: yes
configure:8730: checking whether a program compiled with mpi can be run on this machine
configure:8753: /home/apps/ics/impi/latest/bin64/mpicxx -o conftest -DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11 -I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/ -L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt -rdynamic conftest.cpp -lxdrfile -lgsl -lgslcblas -lz -lmatheval -ldl -llapack -lblas  >&5
configure:8753: $? = 0
configure:8753: ./conftest
configure:8753: $? = 0
configure:8754: result: yes
configure:8771: Regtest suite will use env var PLUMED_MPIRUN to run MPI tests (default: mpirun)
configure:8777: PLUMED seems to be configured properly!
configure:8779: **************************
configure:8786: checking whether C++ objects can be grouped with ld -r -o
configure:8813: result: yes
configure:8830: checking whether static libraries can be created with ar cr
configure:8857: result: yes
configure:8871: I will now check if C++ objects can be linked by C/Fortran compilers
configure:8873: This is relevant if you want to use plumed patch --static on a non-C++ code
configure:8918: checking whether C can link a C++ object
configure:8929: result: no
configure:8918: checking whether C can link a C++ object with library -lstdc++
configure:8924: result: yes
configure:8918: checking whether FORTRAN can link a C++ object
configure:8924: result: yes
configure:8986: **** PLUMED will be installed using the following paths:
configure:8988: **** prefix: /home/acusers/pbalaji/install/plumed-2.4.1
configure:8995: **** exec_prefix: ${prefix}
configure:8997: **** bindir: ${exec_prefix}/bin
configure:8999: **** libdir: ${exec_prefix}/lib
configure:9001: **** includedir: ${prefix}/include
configure:9003: **** datarootdir: ${prefix}/share
configure:9005: **** datadir: ${datarootdir}
configure:9007: **** docdir: ${prefix}/share/doc/plumed
configure:9009: **** htmldir: ${docdir}
configure:9011: **** Executable will be named plumed
configure:9013: **** You can change paths later using options to "make install"
configure:9015: **** e.g. with "make install prefix=/path"
configure:9020: **** PLUMED will be compiled using MPI
configure:9216: creating ./config.status

## ---------------------- ##
## Running config.status. ##
## ---------------------- ##

This file was extended by PLUMED config.status 2, which was
generated by GNU Autoconf 2.69.  Invocation command line was

  CONFIG_FILES    = 
  CONFIG_HEADERS  = 
  CONFIG_LINKS    = 
  CONFIG_COMMANDS = 
  $ ./config.status 

on hn1

config.status:753: creating Makefile.conf
config.status:753: creating sourceme.sh
config.status:753: creating stamp-h

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=set
ac_cv_env_CPPFLAGS_value='-I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/'
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=set
ac_cv_env_CXXFLAGS_value='-DMPICH_IGNORE_CXX_SEEK -mt_mpi'
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value=/home/apps/ics/impi/latest/bin64/mpicxx
ac_cv_env_FCFLAGS_set=
ac_cv_env_FCFLAGS_value=
ac_cv_env_FC_set=
ac_cv_env_FC_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value='-L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt'
ac_cv_env_LDSHARED_set=
ac_cv_env_LDSHARED_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_MPIEXEC_set=
ac_cv_env_MPIEXEC_value=
ac_cv_env_SOEXT_set=
ac_cv_env_SOEXT_value=
ac_cv_env_STATIC_LIBS_set=
ac_cv_env_STATIC_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_fc_compiler_gnu=yes
ac_cv_func_readdir=yes
ac_cv_header_dirent_h=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_execinfo_h=yes
ac_cv_header_gsl_gsl_vector_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_libmolfile_plugin_h=no
ac_cv_header_matheval_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_mpi_h=yes
ac_cv_header_regex_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_header_xdrfile_xdrfile_xtc_h=yes
ac_cv_header_zlib_h=yes
ac_cv_lib_dl_dlopen=yes
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_GREP=/bin/grep
ac_cv_prog_CXXCPP='/home/apps/ics/impi/latest/bin64/mpicxx -E'
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_FC=gfortran
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_cxx_openmp=-fopenmp
ac_cv_prog_doxygen=found
ac_cv_prog_fc_g=yes
ac_cv_prog_xxd=found
ac_cv_search_MPI_Init='none required'
ac_cv_search_backtrace='none required'
ac_cv_search_cblas_dgemv=-lgslcblas
ac_cv_search_dgemv=no
ac_cv_search_dgemv_=-lblas
ac_cv_search_dlopen='none required'
ac_cv_search_dsyevr_=-llapack
ac_cv_search_evaluator_create=-lmatheval
ac_cv_search_gsl_vector_alloc=-lgsl
ac_cv_search_gzopen=-lz
ac_cv_search_readdir_r='none required'
ac_cv_search_regcomp='none required'
ac_cv_search_write_xtc=-lxdrfile

## ----------------- ##
## Output variables. ##
## ----------------- ##

AR_CR='ar cr'
CC='gcc'
CFLAGS='-g -O2 -fPIC'
CPPFLAGS='-I/home/acusers/pbalaji/install/libmatheval/include/ -I/home/acusers/pbalaji/install/xdrfile/include/ -I/home/apps/ics/impi/latest/include64/'
CXX='/home/apps/ics/impi/latest/bin64/mpicxx'
CXXCPP='/home/apps/ics/impi/latest/bin64/mpicxx -E'
CXXFLAGS='-DMPICH_IGNORE_CXX_SEEK -mt_mpi -fPIC -Wall -pedantic -std=c++11'
DEFS='-DPACKAGE_NAME=\"PLUMED\" -DPACKAGE_TARNAME=\"plumed\" -DPACKAGE_VERSION=\"2\" -DPACKAGE_STRING=\"PLUMED\ 2\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -D__PLUMED_HAS_EXTERNAL_BLAS=1 -D__PLUMED_HAS_EXTERNAL_LAPACK=1 -D__PLUMED_HAS_MOLFILE_PLUGINS=1 -D__PLUMED_HAS_MPI=1 -D__PLUMED_HAS_MATHEVAL=1 -D__PLUMED_HAS_READDIR_R=1 -D__PLUMED_HAS_CREGEX=1 -D__PLUMED_HAS_DLOPEN=1 -D__PLUMED_HAS_EXECINFO=1 -D__PLUMED_HAS_ZLIB=1 -D__PLUMED_HAS_GSL=1 -D__PLUMED_HAS_XDRFILE=1 -DNDEBUG=1 -D__PLUMED_HAS_EXCEPTIONS=1 -D_REENTRANT=1'
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
EXEEXT=''
FC='gfortran'
FCFLAGS='-g -O2'
GREP='/bin/grep'
LD='/home/apps/ics/impi/latest/bin64/mpicxx'
LDFLAGS='-L/home/acusers/pbalaji/install/lapack-3.8.0/lib64/ -L/home/acusers/pbalaji/install/xdrfile/lib/ -L/home/apps/ics/impi/latest/lib64/ -L/home/acusers/pbalaji/install/libmatheval/lib/ -lmpi_mt -rdynamic'
LDSHARED='/home/apps/ics/impi/latest/bin64/mpicxx -shared'
LD_RO='ld -r -o'
LIBOBJS=''
LIBS=' -lstdc++ -lxdrfile -lgsl -lgslcblas -lz -lmatheval -ldl -llapack -lblas '
LTLIBOBJS=''
MPIEXEC=''
OBJEXT='o'
OPENMP_CXXFLAGS='-fopenmp'
PACKAGE_BUGREPORT=''
PACKAGE_NAME='PLUMED'
PACKAGE_STRING='PLUMED 2'
PACKAGE_TARNAME='plumed'
PACKAGE_URL=''
PACKAGE_VERSION='2'
PATH_SEPARATOR=':'
SHELL='/bin/sh'
SOEXT=''
STATIC_LIBS='-ldl '
ac_ct_CC='gcc'
ac_ct_CXX=''
ac_ct_FC='gfortran'
bindir='${exec_prefix}/bin'
build_alias=''
build_dir='/home/acusers/pbalaji/install/plumed-2.4.1'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
disable_dependency_tracking='no'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dot=''
doxygen='found'
dvidir='${docdir}'
exec_prefix='${prefix}'
host_alias=''
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
make_doc='no'
make_pdfdoc='no'
mandir='${datarootdir}/man'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/home/acusers/pbalaji/install/plumed-2.4.1'
program_can_run='yes'
program_can_run_mpi='yes'
program_name='plumed'
program_transform_name='s,x,x,'
psdir='${docdir}'
readelf=''
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
xxd='found'

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "PLUMED"
#define PACKAGE_TARNAME "plumed"
#define PACKAGE_VERSION "2"
#define PACKAGE_STRING "PLUMED 2"
#define PACKAGE_BUGREPORT ""
#define PACKAGE_URL ""
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define __PLUMED_HAS_EXTERNAL_BLAS 1
#define __PLUMED_HAS_EXTERNAL_LAPACK 1
#define __PLUMED_HAS_MOLFILE_PLUGINS 1
#define __PLUMED_HAS_MPI 1
#define __PLUMED_HAS_MATHEVAL 1
#define __PLUMED_HAS_READDIR_R 1
#define __PLUMED_HAS_CREGEX 1
#define __PLUMED_HAS_DLOPEN 1
#define __PLUMED_HAS_EXECINFO 1
#define __PLUMED_HAS_ZLIB 1
#define __PLUMED_HAS_GSL 1
#define __PLUMED_HAS_XDRFILE 1
#define NDEBUG 1
#define __PLUMED_HAS_EXCEPTIONS 1
#define _REENTRANT 1

configure: exit 0