PLINK v1.90b7 64-bit (16 Jan 2023)             www.cog-genomics.org/plink/1.9/
(C) 2005-2023 Shaun Purcell, Christopher Chang   GNU General Public License v3
Logging to data_TL_4_KD.log.
Options in effect:
  --bfile twas_snp_chr1
  --make-bed
  --merge-list TL_allfiles13chromosomes_imputedgenes.txt
  --out data_TL_4_KD

515522 MB RAM detected; reserving 257761 MB for main workspace.
Performing single-pass merge (487409 people, 24 variants).

Pass 1: fileset #1 complete.
Pass 1: fileset #2 complete.
Pass 1: fileset #3 complete.
Pass 1: fileset #4 complete.
Pass 1: fileset #5 complete.
Pass 1: fileset #6 complete.
Pass 1: fileset #7 complete.
Pass 1: fileset #8 complete.
Pass 1: fileset #9 complete.
Pass 1: fileset #10 complete.
Pass 1: fileset #11 complete.
Pass 1: fileset #12 complete.
                                              
Merged fileset written to data_TL_4_KD-merge.bed + data_TL_4_KD-merge.bim +
data_TL_4_KD-merge.fam .
24 variants loaded from .bim file.
487409 people (0 males, 0 females, 487409 ambiguous) loaded from .fam.
Ambiguous sex IDs written to data_TL_4_KD.nosex .
Using 1 thread (no multithreaded calculations invoked).
Before main variant filters, 487409 founders and 0 nonfounders present.
Calculating allele frequencies... 0%1%2%3%4%5%6%7%8%9%10%11%12%13%14%15%16%17%18%19%20%21%22%23%24%25%26%27%28%29%30%31%32%33%34%35%36%37%38%39%40%41%42%43%44%45%46%47%48%49%50%51%52%53%54%55%56%57%58%59%60%61%62%63%64%65%66%67%68%69%70%71%72%73%74%75%76%77%78%79%80%81%82%83%84%85%86%87%88%89%90%91%92%93%94%95%96%97%98%99% done.
Total genotyping rate is 0.99703.
24 variants and 487409 people pass filters and QC.
Note: No phenotypes present.
--make-bed to data_TL_4_KD.bed + data_TL_4_KD.bim + data_TL_4_KD.fam ... 0%1%2%3%4%5%6%7%8%9%10%11%12%13%14%15%16%17%18%19%20%21%22%23%24%25%26%27%28%29%30%31%32%33%34%35%36%37%38%39%40%41%42%43%44%45%46%47%48%49%50%51%52%53%54%55%56%57%58%59%60%61%62%63%64%65%66%67%68%69%70%71%72%73%74%75%76%77%78%79%80%81%82%83%84%85%86%87%88%89%90%91%92%93%94%95%96%97%98%99%done.