This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by libmesh configure 1.6.0-pre, which was generated by GNU Autoconf 2.69. Invocation command line was $ /home/lin/projects/moose/scripts/../libmesh/configure INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C --with-methods=opt oprof dbg --prefix=/home/lin/projects/moose/scripts/../libmesh/installed --enable-silent-rules --enable-unique-id --disable-warnings --enable-glibcxx-debugging --with-thread-model=openmp --disable-maintainer-mode --enable-petsc-hypre-required --enable-metaphysicl-required --disable-vtk ## --------- ## ## Platform. ## ## --------- ## hostname = lin-FX503VM uname -m = x86_64 uname -r = 5.3.0-40-generic uname -s = Linux uname -v = #32~18.04.1-Ubuntu SMP Mon Feb 3 14:05:59 UTC 2020 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/lin/.linuxbrew/bin PATH: /home/lin/projects/moose/python/peacock PATH: /opt/moose/miniconda/bin PATH: /opt/moose/gperftools-2.7/bin PATH: /opt/moose/mpich-3.3/gcc-9.2.0/bin PATH: /opt/moose/gcc-9.2.0/bin PATH: /opt/moose/Modules/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /usr/games PATH: /usr/local/games PATH: /snap/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3675: result: --------------------------------------------- configure:3677: result: ----------- Configuring libMesh ------------- configure:3679: result: --------------------------------------------- configure:3721: checking build system type configure:3735: result: x86_64-pc-linux-gnu configure:3755: checking host system type configure:3768: result: x86_64-pc-linux-gnu configure:3788: checking target system type configure:3801: result: x86_64-pc-linux-gnu configure:3874: checking for a BSD-compatible install configure:3942: result: /home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C configure:3953: checking whether build environment is sane configure:4008: result: yes configure:4159: checking for a thread-safe mkdir -p configure:4198: result: /home/lin/.linuxbrew/bin/gmkdir -p configure:4205: checking for gawk configure:4235: result: no configure:4205: checking for mawk configure:4221: found /usr/bin/mawk configure:4232: result: mawk configure:4243: checking whether make sets $(MAKE) configure:4265: result: yes configure:4294: checking whether make supports nested variables configure:4311: result: yes configure:4400: checking whether UID '1000' is supported by ustar format configure:4403: result: yes configure:4410: checking whether GID '1000' is supported by ustar format configure:4413: result: yes configure:4421: checking how to create a ustar tar archive configure:4432: tar --version tar (GNU tar) 1.29 Copyright (C) 2015 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later . This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by John Gilmore and Jay Fenlason. configure:4435: $? = 0 configure:4475: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar configure:4478: $? = 0 configure:4482: tar -xf - >> configure:4703: checking for perl configure:4721: found /home/lin/.linuxbrew/bin/perl configure:4733: result: /home/lin/.linuxbrew/bin/perl configure:5054: checking whether make supports the include directive configure:5069: make -f confmf.GNU && cat confinc.out this is the am__doit target configure:5072: $? = 0 configure:5091: result: yes (GNU style) configure:5246: checking for C compiler version configure:5255: mpicc --version >&5 gcc (Homebrew GCC 5.5.0_7) 5.5.0 Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5266: $? = 0 configure:5255: mpicc -v >&5 mpicc for MPICH version 3.3 Reading specs from /home/lin/.linuxbrew/Cellar/gcc/5.5.0_7/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.5.0/specs COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/home/lin/.linuxbrew/Cellar/gcc/5.5.0_7/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.5.0/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ../configure --prefix=/home/linuxbrew/.linuxbrew/Cellar/gcc/5.5.0_7 --disable-nls --enable-checking=release --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-5 --with-gmp=/home/linuxbrew/.linuxbrew/opt/gmp --with-mpfr=/home/linuxbrew/.linuxbrew/opt/mpfr --with-mpc=/home/linuxbrew/.linuxbrew/opt/libmpc --with-pkgversion='Homebrew GCC 5.5.0_7' --with-isl=/home/linuxbrew/.linuxbrew/opt/isl@0.18 --with-bugurl=https://github.com/Homebrew/linuxbrew-core/issues --with-boot-ldflags='-static-libstdc++ -static-libgcc ' --disable-multilib Thread model: posix gcc version 5.5.0 (Homebrew GCC 5.5.0_7) configure:5266: $? = 0 configure:5255: mpicc -V >&5 gcc: error: unrecognized command line option '-V' configure:5266: $? = 1 configure:5255: mpicc -qversion >&5 gcc: error: unrecognized command line option '-qversion' configure:5266: $? = 1 configure:5286: checking whether the C compiler works configure:5308: mpicc conftest.c >&5 configure:5312: $? = 0 configure:5360: result: yes configure:5363: checking for C compiler default output file name configure:5365: result: a.out configure:5371: checking for suffix of executables configure:5378: mpicc -o conftest conftest.c >&5 configure:5382: $? = 0 configure:5404: result: configure:5426: checking whether we are cross compiling configure:5434: mpicc -o conftest conftest.c >&5 configure:5438: $? = 0 configure:5445: ./conftest configure:5449: $? = 0 configure:5464: result: no configure:5469: checking for suffix of object files configure:5491: mpicc -c conftest.c >&5 configure:5495: $? = 0 configure:5516: result: o configure:5520: checking whether we are using the GNU C compiler configure:5539: mpicc -c conftest.c >&5 configure:5539: $? = 0 configure:5548: result: yes configure:5557: checking whether mpicc accepts -g configure:5577: mpicc -c -g conftest.c >&5 configure:5577: $? = 0 configure:5618: result: yes configure:5635: checking for mpicc option to accept ISO C89 configure:5698: mpicc -c conftest.c >&5 configure:5698: $? = 0 configure:5711: result: none needed configure:5736: checking whether mpicc understands -c and -o together configure:5758: mpicc -c conftest.c -o conftest2.o configure:5761: $? = 0 configure:5758: mpicc -c conftest.c -o conftest2.o configure:5761: $? = 0 configure:5773: result: yes configure:5792: checking dependency style of mpicc configure:5903: result: gcc3 configure:6067: checking for Fortran compiler version configure:6076: mpif90 --version >&5 GNU Fortran (Homebrew GCC 5.5.0_7) 5.5.0 Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:6087: $? = 0 configure:6076: mpif90 -v >&5 mpifort for MPICH version 3.3 Reading specs from /home/lin/.linuxbrew/Cellar/gcc/5.5.0_7/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.5.0/specs COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/home/lin/.linuxbrew/Cellar/gcc/5.5.0_7/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.5.0/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ../configure --prefix=/home/linuxbrew/.linuxbrew/Cellar/gcc/5.5.0_7 --disable-nls --enable-checking=release --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-5 --with-gmp=/home/linuxbrew/.linuxbrew/opt/gmp --with-mpfr=/home/linuxbrew/.linuxbrew/opt/mpfr --with-mpc=/home/linuxbrew/.linuxbrew/opt/libmpc --with-pkgversion='Homebrew GCC 5.5.0_7' --with-isl=/home/linuxbrew/.linuxbrew/opt/isl@0.18 --with-bugurl=https://github.com/Homebrew/linuxbrew-core/issues --with-boot-ldflags='-static-libstdc++ -static-libgcc ' --disable-multilib Thread model: posix gcc version 5.5.0 (Homebrew GCC 5.5.0_7) configure:6087: $? = 0 configure:6076: mpif90 -V >&5 gfortran: error: unrecognized command line option '-V' configure:6087: $? = 1 configure:6076: mpif90 -qversion >&5 gfortran: error: unrecognized command line option '-qversion' configure:6087: $? = 1 configure:6096: checking whether we are using the GNU Fortran compiler configure:6109: mpif90 -c conftest.F >&5 configure:6109: $? = 0 configure:6118: result: yes configure:6124: checking whether mpif90 accepts -g configure:6135: mpif90 -c -g conftest.f >&5 configure:6135: $? = 0 configure:6143: result: yes configure:6297: checking for Fortran 77 compiler version configure:6306: mpif77 --version >&5 GNU Fortran (Homebrew GCC 5.5.0_7) 5.5.0 Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:6317: $? = 0 configure:6306: mpif77 -v >&5 mpifort for MPICH version 3.3 Reading specs from /home/lin/.linuxbrew/Cellar/gcc/5.5.0_7/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.5.0/specs COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/home/lin/.linuxbrew/Cellar/gcc/5.5.0_7/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.5.0/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ../configure --prefix=/home/linuxbrew/.linuxbrew/Cellar/gcc/5.5.0_7 --disable-nls --enable-checking=release --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-5 --with-gmp=/home/linuxbrew/.linuxbrew/opt/gmp --with-mpfr=/home/linuxbrew/.linuxbrew/opt/mpfr --with-mpc=/home/linuxbrew/.linuxbrew/opt/libmpc --with-pkgversion='Homebrew GCC 5.5.0_7' --with-isl=/home/linuxbrew/.linuxbrew/opt/isl@0.18 --with-bugurl=https://github.com/Homebrew/linuxbrew-core/issues --with-boot-ldflags='-static-libstdc++ -static-libgcc ' --disable-multilib Thread model: posix gcc version 5.5.0 (Homebrew GCC 5.5.0_7) configure:6317: $? = 0 configure:6306: mpif77 -V >&5 gfortran: error: unrecognized command line option '-V' configure:6317: $? = 1 configure:6306: mpif77 -qversion >&5 gfortran: error: unrecognized command line option '-qversion' configure:6317: $? = 1 configure:6326: checking whether we are using the GNU Fortran 77 compiler configure:6339: mpif77 -c conftest.F >&5 configure:6339: $? = 0 configure:6348: result: yes configure:6354: checking whether mpif77 accepts -g configure:6365: mpif77 -c -g conftest.f >&5 configure:6365: $? = 0 configure:6373: result: yes configure:6615: checking for C++ compiler version configure:6624: mpicxx --version >&5 g++ (Homebrew GCC 5.5.0_7) 5.5.0 Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6635: $? = 0 configure:6624: mpicxx -v >&5 mpicxx for MPICH version 3.3 Reading specs from /home/lin/.linuxbrew/Cellar/gcc/5.5.0_7/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.5.0/specs COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/home/lin/.linuxbrew/Cellar/gcc/5.5.0_7/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.5.0/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ../configure --prefix=/home/linuxbrew/.linuxbrew/Cellar/gcc/5.5.0_7 --disable-nls --enable-checking=release --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-5 --with-gmp=/home/linuxbrew/.linuxbrew/opt/gmp --with-mpfr=/home/linuxbrew/.linuxbrew/opt/mpfr --with-mpc=/home/linuxbrew/.linuxbrew/opt/libmpc --with-pkgversion='Homebrew GCC 5.5.0_7' --with-isl=/home/linuxbrew/.linuxbrew/opt/isl@0.18 --with-bugurl=https://github.com/Homebrew/linuxbrew-core/issues --with-boot-ldflags='-static-libstdc++ -static-libgcc ' --disable-multilib Thread model: posix gcc version 5.5.0 (Homebrew GCC 5.5.0_7) configure:6635: $? = 0 configure:6624: mpicxx -V >&5 g++: error: unrecognized command line option '-V' configure:6635: $? = 1 configure:6624: mpicxx -qversion >&5 g++: error: unrecognized command line option '-qversion' configure:6635: $? = 1 configure:6639: checking whether we are using the GNU C++ compiler configure:6658: mpicxx -c conftest.cpp >&5 configure:6658: $? = 0 configure:6667: result: yes configure:6676: checking whether mpicxx accepts -g configure:6696: mpicxx -c -g conftest.cpp >&5 configure:6696: $? = 0 configure:6737: result: yes configure:6762: checking dependency style of mpicxx configure:6873: result: gcc3 configure:6918: result: <<< C++ compiler is gcc-5.x >>> configure:7109: checking for a sed that does not truncate output configure:7173: result: /home/lin/.linuxbrew/bin/sed configure:7179: checking for C++ compiler vendor configure:7227: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope thisisanerror; ^ configure:7227: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__ICC) || defined(__ECC) || defined(__INTEL_COMPILER)) | thisisanerror; | #endif | | ; | return 0; | } configure:7227: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope thisisanerror; ^ configure:7227: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__xlc__) || defined(__xlC__) || defined(__IBMC__) || defined(__IBMCPP__)) | thisisanerror; | #endif | | ; | return 0; | } configure:7227: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope thisisanerror; ^ configure:7227: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__PATHCC__) || defined(__PATHSCALE__)) | thisisanerror; | #endif | | ; | return 0; | } configure:7227: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope thisisanerror; ^ configure:7227: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__clang__)) | thisisanerror; | #endif | | ; | return 0; | } configure:7227: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope thisisanerror; ^ configure:7227: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(_CRAYC)) | thisisanerror; | #endif | | ; | return 0; | } configure:7227: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope thisisanerror; ^ configure:7227: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__FUJITSU)) | thisisanerror; | #endif | | ; | return 0; | } configure:7227: mpicxx -c conftest.cpp >&5 conftest.cpp:17:38: error: operator "defined" requires an identifier #if !(defined(SDCC) || defined()) ^ conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope thisisanerror; ^ configure:7227: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(SDCC) || defined()) | thisisanerror; | #endif | | ; | return 0; | } configure:7227: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope thisisanerror; ^ configure:7227: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__SDCC)) | thisisanerror; | #endif | | ; | return 0; | } configure:7227: mpicxx -c conftest.cpp >&5 configure:7227: $? = 0 configure:7235: result: gnu configure:7717: checking whether mpicxx supports C++11 features by default configure:7753: mpicxx -c conftest.cpp >&5 conftest.cpp:16:21: error: expected identifier before 'sizeof' static_assert(sizeof(int) <= sizeof(T), "not big enough"); ^ conftest.cpp:16:21: error: expected ',' or '...' before 'sizeof' conftest.cpp:16:63: error: ISO C++ forbids declaration of 'static_assert' with no type [-fpermissive] static_assert(sizeof(int) <= sizeof(T), "not big enough"); ^ conftest.cpp:19:29: error: '>>' should be '> >' within a nested template argument list typedef check> right_angle_brackets; ^ conftest.cpp:22:13: error: expected constructor, destructor, or type conversion before '(' token decltype(a) b; ^ conftest.cpp:26:15: error: expected unqualified-id before '&&' token check_type&& cr = static_cast(c); ^ conftest.cpp:28:10: error: 'd' does not name a type auto d = a; ^ conftest.cpp:29:10: error: 'l' does not name a type auto l = [](){}; ^ conftest.cpp:34:5: error: 'constexpr' does not name a type constexpr int multiply (int x, int y) { return x * y; } ^ conftest.cpp:34:5: note: C++11 'constexpr' only available with -std=c++11 or -std=gnu++11 conftest.cpp:38:5: error: expected unqualified-id before 'using' using MyCheck = check; ^ configure:7753: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | /* end confdefs.h. */ | | template | struct check | { | static_assert(sizeof(int) <= sizeof(T), "not big enough"); | }; | | typedef check> right_angle_brackets; | | int a; | decltype(a) b; | | typedef check check_type; | check_type c; | check_type&& cr = static_cast(c); | | auto d = a; | auto l = [](){}; | | // The compiler may evaluate something like: | // const int val = multiply(10, 10); | // at compile time. | constexpr int multiply (int x, int y) { return x * y; } | | // A minimally-conforming C++11 compiler must support alias declarations | template | using MyCheck = check; | configure:7760: result: no configure:7770: checking whether mpicxx supports C++11 features with -std=gnu++11 configure:7808: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:7808: $? = 0 configure:7817: result: yes configure:8595: result: <<< Configuring libMesh with methods "opt oprof dbg" >>> configure:8744: result: <<< Compiler warnings are just warnings >>> configure:8814: result: <<< Disabling extra paranoid compiler warnings >>> configure:8852: checking for C++11 auto keyword support configure:8879: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:8879: $? = 0 configure:8881: result: yes configure:8921: checking for C++11 range-based for loop support configure:8956: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:8956: $? = 0 configure:8958: result: yes configure:9000: checking for C++11 initializer list support configure:9028: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9028: $? = 0 configure:9030: result: yes configure:9070: checking for C++11 std::unique_ptr support configure:9106: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9106: $? = 0 configure:9108: result: yes configure:9152: checking for C++11 std::make_unique workaround support configure:9191: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9191: $? = 0 configure:9193: result: yes configure:9233: checking for C++11 std::tuple support configure:9279: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9279: $? = 0 configure:9281: result: yes configure:9320: checking for C++11 lambda support configure:9354: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9354: $? = 0 configure:9356: result: yes configure:9396: checking for C++11 fixed type enumeration support configure:9423: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9423: $? = 0 configure:9425: result: yes configure:9464: checking for C++11 fixed type enumeration forward declaration support configure:9496: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9496: $? = 0 configure:9498: result: yes configure:9537: checking for C++11 override keyword support configure:9568: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9568: $? = 0 configure:9570: result: yes configure:9610: checking for C++11 move constructor support configure:9650: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9650: $? = 0 configure:9652: result: yes configure:9692: checking for C++11 deleted functions support configure:9721: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9721: $? = 0 configure:9723: result: yes configure:9763: checking for C++11 defaulted functions support configure:9794: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9794: $? = 0 configure:9796: result: yes configure:9836: checking for C++11 nullptr support configure:9867: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9867: $? = 0 configure:9869: result: yes configure:9909: checking for C++11 'final' keyword support configure:9944: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9944: $? = 0 configure:9976: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp:31:20: error: 'void A::bar()' marked 'final', but is not virtual void bar() final; ^ configure:9976: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | /* end confdefs.h. */ | | struct A | { | // Error: non-virtual function cannot be final | void bar() final; | }; | | int | main () | { | | | ; | return 0; | } configure:10014: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp:35:20: error: virtual function 'virtual void B::foo()' void foo(); ^ conftest.cpp:30:28: error: overriding final function 'virtual void A::foo()' virtual void foo() final; ^ configure:10014: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | /* end confdefs.h. */ | | struct A | { | virtual void foo() final; | }; | struct B : A | { | // Error: foo cannot be overridden as it's final in A | void foo(); | }; | | int | main () | { | | | ; | return 0; | } configure:10056: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp:38:20: error: cannot derive from 'final' base 'B' in derived type 'C' struct C : B ^ configure:10056: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | /* end confdefs.h. */ | | struct A | { | }; | | // struct B is final | struct B final : A | { | }; | | // Error: B is final | struct C : B | { | }; | | int | main () | { | | | ; | return 0; | } configure:10073: result: yes configure:10109: checking for C++11 decltype support configure:10140: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10140: $? = 0 configure:10142: result: yes configure:10182: checking for C++11 std::begin/end support for arrays configure:10211: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10211: $? = 0 configure:10213: result: yes configure:10240: checking for C++11 std container erase() functions returning iterators configure:10287: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10287: $? = 0 configure:10289: result: yes configure:10316: checking for C++11 std container emplace() functions configure:10369: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10369: $? = 0 configure:10371: result: yes configure:10398: checking for C++11 std::iota algorithm configure:10427: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10427: $? = 0 configure:10429: result: yes configure:10456: checking for C++11 std::vector::data() API configure:10484: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10484: $? = 0 configure:10486: result: yes configure:10513: checking for C++11 std::shared_ptr support configure:10545: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10545: $? = 0 configure:10548: result: yes configure:10591: checking for C++11 rvalue references support configure:10620: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10620: $? = 0 configure:10622: result: yes configure:10662: checking for C++11 std::to_string() support configure:10698: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10698: $? = 0 configure:10700: result: yes configure:10740: checking for C++11 constexpr support configure:10768: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10768: $? = 0 configure:10770: result: yes configure:10810: checking for C++11 variadic template support configure:10847: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10847: $? = 0 configure:10849: result: yes configure:10889: checking for C++11 alias declarations support configure:10924: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10924: $? = 0 configure:10926: result: yes configure:10966: checking for C++11 std::array configure:10995: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10995: $? = 0 configure:10997: result: yes configure:11035: checking for C++11 std::isnan configure:11053: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11053: $? = 0 configure:11055: result: yes configure:11067: checking for C++11 std::isinf configure:11085: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11085: $? = 0 configure:11087: result: yes configure:11124: checking for C++14 std::make_unique support configure:11155: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:45:33: error: 'make_unique' is not a member of 'std' std::unique_ptr up = std::make_unique(42); ^ conftest.cpp:45:50: error: expected primary-expression before 'int' std::unique_ptr up = std::make_unique(42); ^ configure:11155: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | /* end confdefs.h. */ | | #include | | int | main () | { | | { | // Normally, you would use "auto" on the LHS here to avoid | // repeating the type name, but we are not testing auto here. | std::unique_ptr up = std::make_unique(42); | } // Foo deleted when up goes out of scope | | ; | return 0; | } configure:11166: result: no configure:11193: checking for C++11 std::regex support configure:11228: mpicxx -o conftest -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11228: $? = 0 configure:11228: ./conftest configure:11228: $? = 0 configure:11230: result: yes configure:11269: checking for C++11 support configure:11315: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11315: $? = 0 configure:11317: result: yes configure:11353: checking for C++11 support configure:11407: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11407: $? = 0 configure:11409: result: yes configure:11456: checking for C++11 support configure:11592: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11592: $? = 0 configure:11594: result: yes configure:11647: checking for C++11 std::asinh support in configure:11664: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11664: $? = 0 configure:11666: result: yes configure:11682: checking for C++11 std::acosh support in configure:11699: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11699: $? = 0 configure:11701: result: yes configure:11717: checking for C++11 std::atanh support in configure:11734: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11734: $? = 0 configure:11736: result: yes configure:11753: checking for C++11 std::asinh(complex) support in configure:11771: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11771: $? = 0 configure:11773: result: yes configure:11789: checking for C++11 std::acosh(complex) support in configure:11807: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11807: $? = 0 configure:11809: result: yes configure:11825: checking for C++11 std::atanh(complex) support in configure:11843: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11843: $? = 0 configure:11845: result: yes configure:11861: checking for C++11 std::erf support in configure:11878: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11878: $? = 0 configure:11880: result: yes configure:11982: checking for C++17 fallthrough attribute support configure:12010: mpicxx -c -std=gnu++11 -Werror -Wall -Wextra -pedantic conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:56:15: error: attributes at the beginning of statement are ignored [-Werror=attributes] [[fallthrough]]; ^ cc1plus: all warnings being treated as errors configure:12010: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | /* end confdefs.h. */ | | | int | main () | { | | int i=1, j; | switch(i) { | case 0: | j=0; | [[fallthrough]]; | case 1: | j=1; | break; | default: | j=2; | } | (void)j; // Avoid unused variable warning | | | ; | return 0; | } configure:12033: result: no configure:12045: checking for __attribute__ ((fallthrough)) support configure:12073: mpicxx -c -std=gnu++11 -Werror -Wall -Wextra -pedantic conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:56:23: error: expected primary-expression before '__attribute__' __attribute__((fallthrough)); ^ configure:12073: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | /* end confdefs.h. */ | | | int | main () | { | | int i=1, j; | switch(i) { | case 0: | j=0; | __attribute__((fallthrough)); | case 1: | j=1; | break; | default: | j=2; | } | (void)j; // Avoid unused variable warning | | | ; | return 0; | } configure:12084: result: no configure:12169: checking how to print strings configure:12196: result: printf configure:12217: checking for a sed that does not truncate output configure:12281: result: /home/lin/.linuxbrew/bin/sed configure:12299: checking for grep that handles long lines and -e configure:12357: result: /bin/grep configure:12362: checking for egrep configure:12424: result: /bin/grep -E configure:12429: checking for fgrep configure:12491: result: /bin/grep -F configure:12526: checking for ld used by mpicc configure:12593: result: /home/lin/.linuxbrew/bin/ld configure:12600: checking if the linker (/home/lin/.linuxbrew/bin/ld) is GNU ld configure:12615: result: yes configure:12627: checking for BSD- or MS-compatible name lister (nm) configure:12681: result: /home/lin/.linuxbrew/bin/nm -B configure:12811: checking the name lister (/home/lin/.linuxbrew/bin/nm -B) interface configure:12818: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:12821: /home/lin/.linuxbrew/bin/nm -B "conftest.o" configure:12824: output 0000000000000000 B some_variable configure:12831: result: BSD nm configure:12834: checking whether ln -s works configure:12838: result: yes configure:12846: checking the maximum length of command line arguments configure:12977: result: 1572864 configure:13025: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:13065: result: func_convert_file_noop configure:13072: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:13092: result: func_convert_file_noop configure:13099: checking for /home/lin/.linuxbrew/bin/ld option to reload object files configure:13106: result: -r configure:13180: checking for objdump configure:13196: found /home/lin/.linuxbrew/bin/objdump configure:13207: result: objdump configure:13239: checking how to recognize dependent libraries configure:13439: result: pass_all configure:13524: checking for dlltool configure:13540: found /home/lin/.linuxbrew/bin/dlltool configure:13551: result: dlltool configure:13584: checking how to associate runtime and link libraries configure:13611: result: printf %s\n configure:13671: checking for ar configure:13687: found /home/lin/.linuxbrew/bin/ar configure:13698: result: ar configure:13735: checking for archiver @FILE support configure:13752: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:13752: $? = 0 configure:13755: ar cru libconftest.a @conftest.lst >&5 ar: `u' modifier ignored since `D' is the default (see `U') configure:13758: $? = 0 configure:13763: ar cru libconftest.a @conftest.lst >&5 ar: `u' modifier ignored since `D' is the default (see `U') ar: conftest.o: No such file or directory configure:13766: $? = 1 configure:13778: result: @ configure:13836: checking for strip configure:13852: found /home/lin/.linuxbrew/bin/strip configure:13863: result: strip configure:13935: checking for ranlib configure:13951: found /home/lin/.linuxbrew/bin/ranlib configure:13962: result: ranlib configure:14064: checking command to parse /home/lin/.linuxbrew/bin/nm -B output from mpicc object configure:14217: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:14220: $? = 0 configure:14224: /home/lin/.linuxbrew/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:14227: $? = 0 configure:14293: mpicxx -o conftest -std=gnu++11 conftest.cpp conftstm.o >&5 configure:14296: $? = 0 configure:14334: result: ok configure:14381: checking for sysroot configure:14411: result: no configure:14418: checking for a working dd configure:14456: result: /bin/dd configure:14460: checking how to truncate binary pipes configure:14475: result: /bin/dd bs=4096 count=1 configure:14611: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:14614: $? = 0 configure:14804: checking for mt configure:14820: found /bin/mt configure:14831: result: mt configure:14854: checking if mt is a manifest tool configure:14860: mt '-?' configure:14868: result: no configure:15545: checking how to run the C preprocessor configure:15576: mpicc -E conftest.c configure:15576: $? = 0 configure:15590: mpicc -E conftest.c conftest.c:46:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:15590: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | /* end confdefs.h. */ | #include configure:15615: result: mpicc -E configure:15635: mpicc -E conftest.c configure:15635: $? = 0 configure:15649: mpicc -E conftest.c conftest.c:46:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:15649: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | /* end confdefs.h. */ | #include configure:15678: checking for ANSI C header files configure:15698: mpicc -c conftest.c >&5 configure:15698: $? = 0 configure:15771: mpicc -o conftest conftest.c >&5 configure:15771: $? = 0 configure:15771: ./conftest configure:15771: $? = 0 configure:15782: result: yes configure:15795: checking for sys/types.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15795: checking for sys/stat.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15795: checking for stdlib.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15795: checking for string.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15795: checking for memory.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15795: checking for strings.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15795: checking for inttypes.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15795: checking for stdint.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15795: checking for unistd.h configure:15795: mpicc -c conftest.c >&5 configure:15795: $? = 0 configure:15795: result: yes configure:15809: checking for dlfcn.h configure:15809: mpicc -c conftest.c >&5 configure:15809: $? = 0 configure:15809: result: yes configure:16075: checking for objdir configure:16090: result: .libs configure:16354: checking if mpicc supports -fno-rtti -fno-exceptions configure:16372: mpicc -c -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C configure:16376: $? = 0 configure:16389: result: no configure:16747: checking for mpicc option to produce PIC configure:16754: result: -fPIC -DPIC configure:16762: checking if mpicc PIC flag -fPIC -DPIC works configure:16780: mpicc -c -fPIC -DPIC -DPIC conftest.c >&5 configure:16784: $? = 0 configure:16797: result: yes configure:16826: checking if mpicc static flag -static works configure:16854: result: yes configure:16869: checking if mpicc supports -c -o file.o configure:16890: mpicc -c -o out/conftest2.o conftest.c >&5 configure:16894: $? = 0 configure:16916: result: yes configure:16924: checking if mpicc supports -c -o file.o configure:16971: result: yes configure:17004: checking whether the mpicc linker (/home/lin/.linuxbrew/bin/ld -m elf_x86_64) supports shared libraries configure:18263: result: yes configure:18300: checking whether -lc should be explicitly linked in configure:18308: mpicc -c conftest.c >&5 configure:18311: $? = 0 configure:18326: mpicc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 configure:18329: $? = 0 configure:18343: result: no configure:18503: checking dynamic linker characteristics configure:19084: mpicc -o conftest -Wl,-rpath -Wl,/foo conftest.c >&5 configure:19084: $? = 0 configure:19321: result: GNU/Linux ld.so configure:19443: checking how to hardcode library paths into programs configure:19468: result: immediate configure:20016: checking whether stripping libraries is possible configure:20021: result: yes configure:20056: checking if libtool supports shared libraries configure:20058: result: yes configure:20061: checking whether to build shared libraries configure:20086: result: yes configure:20089: checking whether to build static libraries configure:20093: result: no configure:20116: checking how to run the C++ preprocessor configure:20143: mpicxx -E conftest.cpp configure:20143: $? = 0 configure:20157: mpicxx -E conftest.cpp conftest.cpp:58:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:20157: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:20182: result: mpicxx -E configure:20202: mpicxx -E conftest.cpp configure:20202: $? = 0 configure:20216: mpicxx -E conftest.cpp conftest.cpp:58:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:20216: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:20378: checking for ld used by mpicxx configure:20445: result: /home/lin/.linuxbrew/bin/ld -m elf_x86_64 configure:20452: checking if the linker (/home/lin/.linuxbrew/bin/ld -m elf_x86_64) is GNU ld configure:20467: result: yes configure:20522: checking whether the mpicxx linker (/home/lin/.linuxbrew/bin/ld -m elf_x86_64) supports shared libraries configure:21595: result: yes configure:21631: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:21634: $? = 0 configure:22115: checking for mpicxx option to produce PIC configure:22122: result: -fPIC -DPIC configure:22130: checking if mpicxx PIC flag -fPIC -DPIC works configure:22148: mpicxx -c -std=gnu++11 -fPIC -DPIC -DPIC conftest.cpp >&5 configure:22152: $? = 0 configure:22165: result: yes configure:22188: checking if mpicxx static flag -static works configure:22216: result: yes configure:22228: checking if mpicxx supports -c -o file.o configure:22249: mpicxx -c -std=gnu++11 -o out/conftest2.o conftest.cpp >&5 configure:22253: $? = 0 configure:22275: result: yes configure:22280: checking if mpicxx supports -c -o file.o configure:22327: result: yes configure:22357: checking whether the mpicxx linker (/home/lin/.linuxbrew/bin/ld -m elf_x86_64) supports shared libraries configure:22397: result: yes configure:22538: checking dynamic linker characteristics configure:23283: result: GNU/Linux ld.so configure:23348: checking how to hardcode library paths into programs configure:23373: result: immediate configure:23514: checking if libtool supports shared libraries configure:23516: result: yes configure:23519: checking whether to build shared libraries configure:23543: result: yes configure:23546: checking whether to build static libraries configure:23550: result: no configure:23902: checking for mpif77 option to produce PIC configure:23909: result: -fPIC configure:23917: checking if mpif77 PIC flag -fPIC works configure:23935: mpif77 -c -g -O2 -fPIC conftest.f >&5 configure:23939: $? = 0 configure:23952: result: yes configure:23975: checking if mpif77 static flag -static works configure:24003: result: yes configure:24015: checking if mpif77 supports -c -o file.o configure:24036: mpif77 -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:24040: $? = 0 configure:24062: result: yes configure:24067: checking if mpif77 supports -c -o file.o configure:24114: result: yes configure:24144: checking whether the mpif77 linker (/home/lin/.linuxbrew/bin/ld -m elf_x86_64) supports shared libraries configure:25353: result: yes configure:25494: checking dynamic linker characteristics configure:26233: result: GNU/Linux ld.so configure:26298: checking how to hardcode library paths into programs configure:26323: result: immediate configure:26460: checking if libtool supports shared libraries configure:26462: result: yes configure:26465: checking whether to build shared libraries configure:26489: result: yes configure:26492: checking whether to build static libraries configure:26496: result: no configure:26530: mpif90 -c -g -O2 conftest.f >&5 configure:26533: $? = 0 configure:26993: checking for mpif90 option to produce PIC configure:27000: result: -fPIC configure:27008: checking if mpif90 PIC flag -fPIC works configure:27026: mpif90 -c -g -O2 -fPIC conftest.f >&5 configure:27030: $? = 0 configure:27043: result: yes configure:27066: checking if mpif90 static flag -static works configure:27094: result: yes configure:27106: checking if mpif90 supports -c -o file.o configure:27127: mpif90 -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:27131: $? = 0 configure:27153: result: yes configure:27158: checking if mpif90 supports -c -o file.o configure:27205: result: yes configure:27235: checking whether the mpif90 linker (/home/lin/.linuxbrew/bin/ld -m elf_x86_64) supports shared libraries configure:28444: result: yes configure:28585: checking dynamic linker characteristics configure:29324: result: GNU/Linux ld.so configure:29389: checking how to hardcode library paths into programs configure:29414: result: immediate configure:29502: checking Major version configure:29504: result: 1 configure:29506: checking Minor version configure:29508: result: 6 configure:29510: checking Point version configure:29512: result: 0 configure:29557: checking whether ln -s works configure:29561: result: yes configure:29586: checking for a sed that does not truncate output configure:29650: result: /home/lin/.linuxbrew/bin/sed configure:29670: checking for pkg-config configure:29688: found /home/lin/.linuxbrew/bin/pkg-config configure:29701: result: /home/lin/.linuxbrew/bin/pkg-config configure:29715: checking whether the compiler implements namespaces configure:29738: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:29738: $? = 0 configure:29752: result: yes configure:29761: result: --------------------------------------------- configure:29763: result: ------- Configuring compiler features ------- configure:29765: result: --------------------------------------------- configure:29931: result: <<< Default floating point is double precision (double) >>> configure:29972: checking for C/C++ restrict keyword configure:29997: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:29997: $? = 0 configure:30005: result: __restrict configure:30035: checking pwd.h usability configure:30035: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30035: $? = 0 configure:30035: result: yes configure:30035: checking pwd.h presence configure:30035: mpicxx -E conftest.cpp configure:30035: $? = 0 configure:30035: result: yes configure:30035: checking for pwd.h configure:30035: result: yes configure:30073: result: <<< Configuring library with getpwuid >>> configure:30097: result: <<< Configuring library with exception throwing support >>> configure:30123: result: <<< Configuring library with compile timestamps >>> configure:30138: checking size of short int configure:30143: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30143: $? = 0 configure:30143: ./conftest configure:30143: $? = 0 configure:30157: result: 2 configure:30171: checking size of int configure:30176: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30176: $? = 0 configure:30176: ./conftest configure:30176: $? = 0 configure:30190: result: 4 configure:30204: checking size of unsigned int configure:30209: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30209: $? = 0 configure:30209: ./conftest configure:30209: $? = 0 configure:30223: result: 4 configure:30237: checking size of size_t configure:30242: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30242: $? = 0 configure:30242: ./conftest configure:30242: $? = 0 configure:30256: result: 8 configure:30270: checking size of long int configure:30275: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30275: $? = 0 configure:30275: ./conftest configure:30275: $? = 0 configure:30289: result: 8 configure:30303: checking size of float configure:30308: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30308: $? = 0 configure:30308: ./conftest configure:30308: $? = 0 configure:30322: result: 4 configure:30336: checking size of double configure:30341: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30341: $? = 0 configure:30341: ./conftest configure:30341: $? = 0 configure:30355: result: 8 configure:30369: checking size of void * configure:30374: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30374: $? = 0 configure:30374: ./conftest configure:30374: $? = 0 configure:30388: result: 8 configure:30407: checking size of function_pointer configure:30412: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30412: $? = 0 configure:30412: ./conftest configure:30412: $? = 0 configure:30427: result: 8 configure:30442: checking whether the compiler supports Run-Time Type Identification configure:30477: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30477: $? = 0 configure:30491: result: yes configure:30507: checking getopt.h usability configure:30507: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30507: $? = 0 configure:30507: result: yes configure:30507: checking getopt.h presence configure:30507: mpicxx -E conftest.cpp configure:30507: $? = 0 configure:30507: result: yes configure:30507: checking for getopt.h configure:30507: result: yes configure:30519: checking csignal usability configure:30519: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30519: $? = 0 configure:30519: result: yes configure:30519: checking csignal presence configure:30519: mpicxx -E conftest.cpp configure:30519: $? = 0 configure:30519: result: yes configure:30519: checking for csignal configure:30519: result: yes configure:30531: checking sys/resource.h usability configure:30531: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30531: $? = 0 configure:30531: result: yes configure:30531: checking sys/resource.h presence configure:30531: mpicxx -E conftest.cpp configure:30531: $? = 0 configure:30531: result: yes configure:30531: checking for sys/resource.h configure:30531: result: yes configure:30541: checking whether the compiler has locale configure:30573: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30573: $? = 0 configure:30587: result: yes configure:30595: checking whether the compiler has stringstream configure:30628: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30628: $? = 0 configure:30642: result: yes configure:30722: checking fenv.h usability configure:30722: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30722: $? = 0 configure:30722: result: yes configure:30722: checking fenv.h presence configure:30722: mpicxx -E conftest.cpp configure:30722: $? = 0 configure:30722: result: yes configure:30722: checking for fenv.h configure:30722: result: yes configure:30734: checking xmmintrin.h usability configure:30734: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30734: $? = 0 configure:30734: result: yes configure:30734: checking xmmintrin.h presence configure:30734: mpicxx -E conftest.cpp configure:30734: $? = 0 configure:30734: result: yes configure:30734: checking for xmmintrin.h configure:30734: result: yes configure:30758: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30758: $? = 0 configure:30782: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30782: $? = 0 configure:30797: checking whether sigaction is declared configure:30797: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30797: $? = 0 configure:30797: result: yes configure:30811: checking for mkdir with two arguments configure:30827: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30827: $? = 0 configure:30831: result: yes configure:30840: checking direct.h usability configure:30840: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 conftest.cpp:128:20: fatal error: direct.h: No such file or directory compilation terminated. configure:30840: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:30840: result: no configure:30840: checking direct.h presence configure:30840: mpicxx -E conftest.cpp conftest.cpp:95:20: fatal error: direct.h: No such file or directory compilation terminated. configure:30840: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | /* end confdefs.h. */ | #include configure:30840: result: no configure:30840: checking for direct.h configure:30840: result: no configure:30850: checking whether _mkdir is declared configure:30850: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 conftest.cpp:96:24: fatal error: direct.h: No such file or directory compilation terminated. configure:30850: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | /* end confdefs.h. */ | | #include | | | int | main () | { | #ifndef _mkdir | #ifdef __cplusplus | (void) _mkdir; | #else | (void) _mkdir; | #endif | #endif | | ; | return 0; | } configure:30850: result: no configure:30868: checking sys/utsname.h usability configure:30868: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:30868: $? = 0 configure:30868: result: yes configure:30868: checking sys/utsname.h presence configure:30868: mpicxx -E conftest.cpp configure:30868: $? = 0 configure:30868: result: yes configure:30868: checking for sys/utsname.h configure:30868: result: yes configure:30904: checking whether the compiler supports std::unordered_multimap configure:30935: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:106:47: warning: variable 'it' set but not used [-Wunused-but-set-variable] std::unordered_multimap::iterator it = m.erase(m.begin()); ^ configure:30935: $? = 0 configure:30949: result: yes configure:30970: checking whether the compiler supports std::unordered_map configure:30999: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:108:42: warning: variable 'it' set but not used [-Wunused-but-set-variable] std::unordered_map::iterator it = m.erase(m.begin()); ^ configure:30999: $? = 0 configure:31013: result: yes configure:31034: checking whether the compiler supports std::unordered_multiset configure:31065: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:112:42: warning: variable 'it' set but not used [-Wunused-but-set-variable] std::unordered_multiset::iterator it = s.erase(s.begin()); ^ configure:31065: $? = 0 configure:31079: result: yes configure:31100: checking whether the compiler supports std::unordered_set configure:31130: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:114:37: warning: variable 'it' set but not used [-Wunused-but-set-variable] std::unordered_set::iterator it = s.erase(s.begin()); ^ configure:31130: $? = 0 configure:31144: result: yes configure:31167: checking whether the compiler supports std::hash configure:31198: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:118:15: warning: unused variable 'hashed' [-Wunused-variable] std::size_t hashed = m(12345); ^ conftest.cpp:120:15: warning: unused variable 'hashed2' [-Wunused-variable] std::size_t hashed2 = m2(std::string("foo")); ^ configure:31198: $? = 0 configure:31212: result: yes configure:31246: checking for library containing dlopen configure:31277: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 /home/lin/.linuxbrew/bin/ld: /tmp/ccx3dCLU.o: in function `main': /home/lin/projects/moose/libmesh/build/conftest.cpp:125: undefined reference to `dlopen' collect2: error: ld returned 1 exit status configure:31277: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | #define HAVE_DECL__MKDIR 0 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_STD_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define HAVE_STD_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::unordered_map | #define INCLUDE_UNORDERED_MAP | #define HAVE_STD_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define HAVE_STD_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::unordered_set | #define INCLUDE_UNORDERED_SET | #define HAVE_STD_HASH 1 | #define BEST_HASH std::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char dlopen (); | int | main () | { | return dlopen (); | ; | return 0; | } configure:31277: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp -ldl >&5 configure:31277: $? = 0 configure:31294: result: -ldl configure:31311: checking whether the c++ compiler supports dlopen/dlsym/dlclose configure:31366: mpicxx -o conftest -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp -ldl >&5 configure:31366: $? = 0 configure:31368: result: yes configure:31398: checking whether the compiler supports GCC C++ ABI name demangling configure:31433: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:31433: $? = 0 configure:31447: result: yes configure:31455: checking whether the c++ compiler supports glibc backtrace configure:31481: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:122:8: warning: unused variable 'strings' [-Wunused-variable] char** strings = backtrace_symbols(addresses, size); ^ configure:31481: $? = 0 configure:31495: result: yes configure:31516: checking if errno.h can be wrapped in namespace configure:31536: mpicxx -c -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros conftest.cpp >&5 configure:31536: $? = 0 configure:31538: result: yes configure:31616: result: --------------------------------------------- configure:31618: result: ----- Done configuring compiler features ---- configure:31620: result: --------------------------------------------- configure:31767: result: --------------------------------------------- configure:31769: result: ----- Configuring core library features ----- configure:31771: result: --------------------------------------------- configure:31795: result: configuring gdb command... "gdb" configure:31843: result: >>> INFO: Disabling library warnings <<< configure:31845: result: >>> Configuring library without warnings <<< configure:31881: result: <<< Configuring library with deprecated code support >>> configure:31916: result: <<< Configuring library with forward declared enumerations >>> configure:31970: result: <<< Configuring library to require ``include "libmesh/etc.h"'' style >>> configure:31996: result: <<< Configuring library to keep names in libMesh namespace >>> configure:32047: result: configuring size of boundary_id... 2 configure:32096: result: configuring size of dof_id... 4 configure:32142: result: configuring size of processor_id... 4 configure:32188: result: configuring size of subdomain_id... 2 configure:32240: result: <<< Configuring library with unique id support >>> configure:32289: result: configuring size of unique_id... 8 configure:32335: result: <<< Configuring library with AMR support >>> configure:32359: result: <<< Configuring library with variational smoother support >>> configure:32383: result: <<< Configuring library with periodic BC support >>> configure:32407: result: <<< Configuring library with Dirichlet constraint support >>> configure:32479: result: <<< Configuring library to use ghosted local vectors >>> configure:32504: result: <<< Configuring library to store node valence >>> configure:32568: result: <<< Configuring library with higher order p-FEM shapes >>> configure:32626: result: <<< Configuring library with second derivatives >>> configure:32665: result: <<< Configuring library with real number support >>> configure:32698: result: <<< Configuring library with reference counting support >>> configure:32752: result: <<< Configuring library example suite support >>> configure:32765: result: --------------------------------------------- configure:32767: result: -- Done configuring core library features --- configure:32769: result: --------------------------------------------- configure:32835: result: --------------------------------------------- configure:32837: result: ----- Configuring for optional packages ----- configure:32839: result: --------------------------------------------- configure:32904: checking for built-in XDR support configure:32924: mpicxx -o conftest -std=gnu++11 conftest.cpp -ldl >&5 configure:32924: $? = 0 configure:32926: result: yes configure:33085: checking for boostlib >= 1.57.0 configure:33156: mpicxx -c -std=gnu++11 conftest.cpp >&5 conftest.cpp:141:33: fatal error: boost/version.hpp: No such file or directory compilation terminated. configure:33156: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | #define HAVE_DECL__MKDIR 0 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_STD_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define HAVE_STD_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::unordered_map | #define INCLUDE_UNORDERED_MAP | #define HAVE_STD_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define HAVE_STD_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::unordered_set | #define INCLUDE_UNORDERED_SET | #define HAVE_STD_HASH 1 | #define BEST_HASH std::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_DEPRECATED 1 | #define FORWARD_DECLARE_ENUMS 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 4 | #define SUBDOMAIN_ID_BYTES 2 | #define ENABLE_UNIQUE_ID 1 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_XDR 1 | /* end confdefs.h. */ | | #include | | int | main () | { | | #if BOOST_VERSION >= 105700 | // Everything is okay | #else | # error Boost version is too old | #endif | | ; | return 0; | } configure:33262: mpicxx -c -std=gnu++11 -I/include/boost-0 conftest.cpp >&5 conftest.cpp:141:37: fatal error: boost/version.hpp: No such file or directory compilation terminated. configure:33262: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | #define HAVE_DECL__MKDIR 0 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_STD_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define HAVE_STD_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::unordered_map | #define INCLUDE_UNORDERED_MAP | #define HAVE_STD_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define HAVE_STD_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::unordered_set | #define INCLUDE_UNORDERED_SET | #define HAVE_STD_HASH 1 | #define BEST_HASH std::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_DEPRECATED 1 | #define FORWARD_DECLARE_ENUMS 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 4 | #define SUBDOMAIN_ID_BYTES 2 | #define ENABLE_UNIQUE_ID 1 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_XDR 1 | /* end confdefs.h. */ | | #include | | int | main () | { | | #if BOOST_VERSION >= 105700 | // Everything is okay | #else | # error Boost version is too old | #endif | | ; | return 0; | } configure:33281: We could not detect the boost libraries (version 1.57 or higher). If you have a staged boost library (still not installed) please specify $BOOST_ROOT in your environment and do not give a PATH to --with-boost option. If you are sure you have boost installed, then check your version number looking in . See http://randspringer.de/boost for more documentation. configure:33314: result: <<< External boost installation *not* found... will try to configure for libmesh's internal boost >>> configure:33371: checking for boostlib >= 1.57.0 configure:33442: mpicxx -c -std=gnu++11 -I/home/lin/projects/moose/scripts/../libmesh/contrib/boost/include conftest.cpp >&5 configure:33442: $? = 0 configure:33444: result: yes configure:33582: result: <<< Using libmesh-provided boost in ./contrib >>> configure:33633: checking for boost::movelib::unique_ptr support configure:33660: mpicxx -c -std=gnu++11 -I/home/lin/projects/moose/scripts/../libmesh/contrib/boost/include conftest.cpp >&5 configure:33660: $? = 0 configure:33663: result: yes configure:33775: checking for lam_show_version in -llam configure:33800: mpicxx -o conftest -std=gnu++11 conftest.cpp -llam -L/opt/moose/mpich-3.3/gcc-9.2.0/lib -ldl >&5 /home/lin/.linuxbrew/bin/ld: cannot find -llam collect2: error: ld returned 1 exit status configure:33800: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | #define HAVE_DECL__MKDIR 0 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_STD_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define HAVE_STD_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::unordered_map | #define INCLUDE_UNORDERED_MAP | #define HAVE_STD_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define HAVE_STD_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::unordered_set | #define INCLUDE_UNORDERED_SET | #define HAVE_STD_HASH 1 | #define BEST_HASH std::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_DEPRECATED 1 | #define FORWARD_DECLARE_ENUMS 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 4 | #define SUBDOMAIN_ID_BYTES 2 | #define ENABLE_UNIQUE_ID 1 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_XDR 1 | #define HAVE_BOOST 1 | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char lam_show_version (); | int | main () | { | return lam_show_version (); | ; | return 0; | } configure:33809: result: no configure:33872: checking for MPI_Init in -lmpi configure:33897: mpicxx -o conftest -std=gnu++11 conftest.cpp -lmpi -L/opt/moose/mpich-3.3/gcc-9.2.0/lib -ldl >&5 configure:33897: $? = 0 configure:33906: result: yes configure:33913: result: Found valid MPI installation... configure:34149: checking mpi.h usability configure:34149: mpicxx -c -std=gnu++11 -I/opt/moose/mpich-3.3/gcc-9.2.0/include conftest.cpp >&5 configure:34149: $? = 0 configure:34149: result: yes configure:34149: checking mpi.h presence configure:34149: mpicxx -E -I/opt/moose/mpich-3.3/gcc-9.2.0/include conftest.cpp configure:34149: $? = 0 configure:34149: result: yes configure:34149: checking for mpi.h configure:34149: result: yes configure:34458: checking /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt//include/petscversion.h usability configure:34458: mpicc -c conftest.c >&5 configure:34458: $? = 0 configure:34458: result: yes configure:34458: checking /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt//include/petscversion.h presence configure:34458: mpicc -E conftest.c configure:34458: $? = 0 configure:34458: result: yes configure:34458: checking for /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt//include/petscversion.h configure:34458: result: yes configure:34525: result: <<< Found PETSc 3.11.4 installation in /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt ... >>> configure:34535: checking whether we can compile a trivial PETSc program configure:34564: mpicxx -c -std=gnu++11 -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt//include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include conftest.cpp >&5 In file included from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscsys.h:14:0, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscbag.h:4, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petsc.h:5, from conftest.cpp:144: /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscconf.h:85:36: error: expected '}' before '__attribute' #define PETSC_DEPRECATED_ENUM(why) __attribute((deprecated)) ^ /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscksp.h:430:76: note: in expansion of macro 'PETSC_DEPRECATED_ENUM' #define KSP_DIVERGED_PCSETUP_FAILED_DEPRECATED KSP_DIVERGED_PCSETUP_FAILED PETSC_DEPRECATED_ENUM("Use KSP_DIVERGED_PC_FAILED (since v3.11)") ^ /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscksp.h:452:15: note: in expansion of macro 'KSP_DIVERGED_PCSETUP_FAILED_DEPRECATED' KSP_DIVERGED_PCSETUP_FAILED_DEPRECATED = -11, ^ In file included from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscsnes.h:6:0, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscts.h:7, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petsc.h:29, from conftest.cpp:144: /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscksp.h:452:55: error: expected unqualified-id before '=' token KSP_DIVERGED_PCSETUP_FAILED_DEPRECATED = -11, ^ /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscksp.h:454:52: error: expected declaration before '}' token KSP_CONVERGED_ITERATING = 0} KSPConvergedReason; ^ configure:34564: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | #define HAVE_DECL__MKDIR 0 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_STD_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define HAVE_STD_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::unordered_map | #define INCLUDE_UNORDERED_MAP | #define HAVE_STD_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define HAVE_STD_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::unordered_set | #define INCLUDE_UNORDERED_SET | #define HAVE_STD_HASH 1 | #define BEST_HASH std::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_DEPRECATED 1 | #define FORWARD_DECLARE_ENUMS 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 4 | #define SUBDOMAIN_ID_BYTES 2 | #define ENABLE_UNIQUE_ID 1 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_XDR 1 | #define HAVE_BOOST 1 | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define HAVE_MPI 1 | /* end confdefs.h. */ | | #include | static char help[]=""; | | int main(int argc, char **argv) | { | PetscInitialize(&argc, &argv, (char*)0,help); | PetscFinalize(); | return 0; | } | configure:34571: result: no configure:34591: checking for TAO support via PETSc configure:34623: mpicc -c -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt//include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include conftest.c >&5 In file included from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscsys.h:14:0, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscis.h:7, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscvec.h:9, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscmat.h:6, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscpc.h:6, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscksp.h:6, from /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petsctao.h:4, from conftest.c:144: /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscconf.h:85:36: error: expected ',' or '}' before '__attribute' #define PETSC_DEPRECATED_ENUM(why) __attribute((deprecated)) ^ /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscksp.h:430:76: note: in expansion of macro 'PETSC_DEPRECATED_ENUM' #define KSP_DIVERGED_PCSETUP_FAILED_DEPRECATED KSP_DIVERGED_PCSETUP_FAILED PETSC_DEPRECATED_ENUM("Use KSP_DIVERGED_PC_FAILED (since v3.11)") ^ /opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include/petscksp.h:452:15: note: in expansion of macro 'KSP_DIVERGED_PCSETUP_FAILED_DEPRECATED' KSP_DIVERGED_PCSETUP_FAILED_DEPRECATED = -11, ^ configure:34623: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0-pre" | #define PACKAGE_STRING "libmesh 1.6.0-pre" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0-pre" | #define HAVE_CXX11 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_TUPLE 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM 1 | #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_REGEX 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_TYPE_TRAITS 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_ERF 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 6 | #define MICRO_VERSION 0 | #define LIB_VERSION "1.6.0-pre" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_PWD_H 1 | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_DECL_SIGACTION 1 | #define HAVE_MKDIR /**/ | #define HAVE_DECL__MKDIR 0 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_STD_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define HAVE_STD_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::unordered_map | #define INCLUDE_UNORDERED_MAP | #define HAVE_STD_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define HAVE_STD_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::unordered_set | #define INCLUDE_UNORDERED_SET | #define HAVE_STD_HASH 1 | #define BEST_HASH std::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_DEPRECATED 1 | #define FORWARD_DECLARE_ENUMS 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 4 | #define SUBDOMAIN_ID_BYTES 2 | #define ENABLE_UNIQUE_ID 1 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_XDR 1 | #define HAVE_BOOST 1 | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define HAVE_MPI 1 | /* end confdefs.h. */ | | #include | static char help[]=""; | | int main(int argc, char **argv) | { | Tao tao; | PetscInitialize(&argc, &argv, (char*)0,help); | TaoCreate(PETSC_COMM_WORLD,&tao); | TaoDestroy(&tao); | PetscFinalize(); | return 0; | } | configure:34631: result: no configure:34771: error: *** PETSc was not found, but --enable-petsc-required was specified. ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_restrict=__restrict ac_cv_cxx_compiler_gnu=yes ac_cv_cxx_dlopen=yes ac_cv_cxx_gcc_abi_demangle=yes ac_cv_cxx_glibc_backtrace=yes ac_cv_cxx_hash=yes ac_cv_cxx_have_locale=yes ac_cv_cxx_have_sstream=yes ac_cv_cxx_namespaces=yes ac_cv_cxx_rtti=yes ac_cv_cxx_unordered_map=yes ac_cv_cxx_unordered_multimap=yes ac_cv_cxx_unordered_multiset=yes ac_cv_cxx_unordered_set=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=mpicc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set=set ac_cv_env_CXX_value=mpicxx ac_cv_env_F77_set=set ac_cv_env_F77_value=mpif77 ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=mpif90 ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_HDF5_DIR_set= ac_cv_env_HDF5_DIR_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_METHODS_set=set ac_cv_env_METHODS_value='opt oprof dbg' ac_cv_env_PETSC_ARCH_set= ac_cv_env_PETSC_ARCH_value= ac_cv_env_PETSC_DIR_set=set ac_cv_env_PETSC_DIR_value=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt ac_cv_env_SLEPC_DIR_set= ac_cv_env_SLEPC_DIR_value= ac_cv_env_TRILINOS_DIR_set= ac_cv_env_TRILINOS_DIR_value= ac_cv_env_VTK_DIR_set= ac_cv_env_VTK_DIR_value= ac_cv_env_VTK_INCLUDE_set= ac_cv_env_VTK_INCLUDE_value= ac_cv_env_YACC_set= ac_cv_env_YACC_value= ac_cv_env_YFLAGS_set= ac_cv_env_YFLAGS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_libmesh_CFLAGS_set= ac_cv_env_libmesh_CFLAGS_value= ac_cv_env_libmesh_CPPFLAGS_set= ac_cv_env_libmesh_CPPFLAGS_value= ac_cv_env_libmesh_CXXFLAGS_set= ac_cv_env_libmesh_CXXFLAGS_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_fc_compiler_gnu=yes ac_cv_file_src_base_libmesh_C=no ac_cv_have_decl__mkdir=no ac_cv_have_decl_sigaction=yes ac_cv_have_fedisableexcept=yes ac_cv_have_feenableexcept=yes ac_cv_header__opt_moose_petsc_3_11_4_mpich_3_3_gcc_9_2_0_opt__include_petscversion_h=yes ac_cv_header_csignal=yes ac_cv_header_direct_h=no ac_cv_header_dlfcn_h=yes ac_cv_header_fenv_h=yes ac_cv_header_getopt_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_mpi_h=yes ac_cv_header_pwd_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_resource_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_utsname_h=yes ac_cv_header_unistd_h=yes ac_cv_header_xmmintrin_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_lam_lam_show_version=no ac_cv_lib_mpi_MPI_Init=yes ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_PERL=/home/lin/.linuxbrew/bin/perl ac_cv_path_PKG_CONFIG=/home/lin/.linuxbrew/bin/pkg-config ac_cv_path_SED=/home/lin/.linuxbrew/bin/sed ac_cv_path_lt_DD=/bin/dd ac_cv_path_mkdir=/home/lin/.linuxbrew/bin/gmkdir ac_cv_prog_AWK=mawk ac_cv_prog_CPP='mpicc -E' ac_cv_prog_CXXCPP='mpicxx -E' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_DLLTOOL=dlltool ac_cv_prog_ac_ct_MANIFEST_TOOL=mt ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_fc_g=yes ac_cv_prog_make_make_set=yes ac_cv_search_dlopen=-ldl ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_function_pointer=8 ac_cv_sizeof_int=4 ac_cv_sizeof_long_int=8 ac_cv_sizeof_short_int=2 ac_cv_sizeof_size_t=8 ac_cv_sizeof_unsigned_int=4 ac_cv_sizeof_void_p=8 ac_cv_target=x86_64-pc-linux-gnu am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes am_cv_prog_tar_ustar=gnutar ax_cv_cxx_compile_cxx11=no ax_cv_cxx_compile_cxx11__std_gnupp11=yes ax_cv_cxx_compiler_vendor=gnu lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/home/lin/.linuxbrew/bin/ld lt_cv_path_LDCXX='/home/lin/.linuxbrew/bin/ld -m elf_x86_64' lt_cv_path_NM='/home/lin/.linuxbrew/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC' lt_cv_prog_compiler_pic_F77=-fPIC lt_cv_prog_compiler_pic_FC=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=yes lt_cv_prog_compiler_static_works_CXX=yes lt_cv_prog_compiler_static_works_F77=yes lt_cv_prog_compiler_static_works_FC=yes lt_cv_prog_gnu_ld=yes lt_cv_prog_gnu_ldcxx=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /home/lin/projects/moose/libmesh/build-aux/missing aclocal-1.16' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='0' AM_V='$(V)' ANY_PARANOID_FLAGS='' ANY_WERROR_FLAG='' AR='ar' AUTOCONF='${SHELL} /home/lin/projects/moose/libmesh/build-aux/missing autoconf' AUTOHEADER='${SHELL} /home/lin/projects/moose/libmesh/build-aux/missing autoheader' AUTOMAKE='${SHELL} /home/lin/projects/moose/libmesh/build-aux/missing automake-1.16' AWK='mawk' AZTECOO_INCLUDES='' AZTECOO_LIBS='' AZTECOO_MAKEFILE_EXPORT='' BOOST_CPPFLAGS='-I/home/lin/projects/moose/scripts/../libmesh/contrib/boost/include' BOOST_LDFLAGS='-L/lib64' BUILD_ARCH='' BUILD_DEVSTATUS='' BUILD_HOST='' BUILD_METIS_FALSE='' BUILD_METIS_TRUE='' BUILD_PARMETIS_FALSE='' BUILD_PARMETIS_TRUE='' BUILD_USER='' BUILD_VERSION='' BUNZIP2='' BZIP2='' CAPNPROTO_INCLUDE='' CAPNPROTO_LIBRARY='' CAPNP_BINARY='' CC='mpicc' CCDEPMODE='depmode=gcc3' CFLAGS='' CFLAGS_DBG='-g -Wimplicit ' CFLAGS_DEVEL='-O2 -funroll-loops -fstrict-aliasing -g -Wimplicit -funroll-loops -fstrict-aliasing ' CFLAGS_DVL='' CFLAGS_OPROF='-O2 -funroll-loops -fstrict-aliasing -g -fno-omit-frame-pointer ' CFLAGS_OPT='-O2 -funroll-loops -fstrict-aliasing ' CFLAGS_PROF='-O2 -funroll-loops -fstrict-aliasing -pg ' CODE_COVERAGE_ENABLED_FALSE='' CODE_COVERAGE_ENABLED_TRUE='#' CPP='mpicc -E' CPPFLAGS='' CPPFLAGS_DBG='-DDEBUG -D_GLIBCXX_DEBUG -D_GLIBCXX_DEBUG_PEDANTIC ' CPPFLAGS_DEVEL=' ' CPPFLAGS_OPROF='-DNDEBUG ' CPPFLAGS_OPT='-DNDEBUG ' CPPFLAGS_PROF='-DNDEBUG ' CPPUNIT_CFLAGS='' CPPUNIT_CONFIG='' CPPUNIT_LIBS='' CURL_INCLUDE='' CURL_LIBRARY='' CXX='mpicxx' CXXCPP='mpicxx -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS=' -std=gnu++11' CXXFLAGS_DBG=' -std=gnu++11 -O0 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Woverloaded-virtual -Wno-variadic-macros ' CXXFLAGS_DEVEL=' -std=gnu++11 -O2 -felide-constructors -g -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -Wno-variadic-macros ' CXXFLAGS_DVL='' CXXFLAGS_OPROF=' -std=gnu++11 -O2 -felide-constructors -funroll-loops -fstrict-aliasing -Wdisabled-optimization -Wno-variadic-macros -g -fno-omit-frame-pointer ' CXXFLAGS_OPT=' -std=gnu++11 -O2 -felide-constructors -funroll-loops -fstrict-aliasing -Wdisabled-optimization -Wno-variadic-macros ' CXXFLAGS_PROF=' -std=gnu++11 -O2 -felide-constructors -funroll-loops -fstrict-aliasing -Wdisabled-optimization -Wno-variadic-macros -pg ' CXXSHAREDFLAG='' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DLLTOOL='dlltool' DOT='' DOTPATH='' DOXYGEN='' DSYMUTIL='' DTK_MAKEFILE_EXPORT='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EIGEN_INCLUDE='' EXEEXT='' EXODUS_FORTRAN_API_FALSE='' EXODUS_FORTRAN_API_TRUE='' EXODUS_INCLUDE='' EXODUS_NOT_NETCDF4_FLAG='' F77='mpif77' FC='mpif90' FCFLAGS='-g -O2' FFLAGS='-g -O2' FGREP='/bin/grep -F' FLIBS='' FPARSER_DEVEL_FALSE='' FPARSER_DEVEL_TRUE='' FPARSER_INCLUDE='' FPARSER_LIBRARY='' FPARSER_RELEASE_FALSE='' FPARSER_RELEASE_TRUE='' FPARSER_SUPPORT_DEBUGGING_FALSE='' FPARSER_SUPPORT_DEBUGGING_TRUE='' FPARSER_SUPPORT_JIT_FALSE='' FPARSER_SUPPORT_JIT_TRUE='' GCOV_FLAGS='' GCOV_LDFLAGS='' GIT_CHECKOUT_FALSE='' GIT_CHECKOUT_TRUE='' GIT_REVISION='' GLPK_INCLUDE='' GLPK_LIBRARY='' GMV_INCLUDE='' GMV_LIBRARY='' GREP='/bin/grep' GXX_VERSION='gcc5' GZSTREAM_INCLUDE='' GZSTREAM_LIB='' HAVE_CXX11='1' HAVE_CXX11_ALIAS_DECLARATIONS_FALSE='#' HAVE_CXX11_ALIAS_DECLARATIONS_TRUE='' HAVE_CXX11_AUTO_FALSE='#' HAVE_CXX11_AUTO_TRUE='' HAVE_CXX11_CONDITION_VARIABLE_FALSE='#' HAVE_CXX11_CONDITION_VARIABLE_TRUE='' HAVE_CXX11_CONSTEXPR_FALSE='#' HAVE_CXX11_CONSTEXPR_TRUE='' HAVE_CXX11_DECLTYPE_FALSE='#' HAVE_CXX11_DECLTYPE_TRUE='' HAVE_CXX11_DEFAULTED_FUNCTIONS_FALSE='#' HAVE_CXX11_DEFAULTED_FUNCTIONS_TRUE='' HAVE_CXX11_DELETED_FUNCTIONS_FALSE='#' HAVE_CXX11_DELETED_FUNCTIONS_TRUE='' HAVE_CXX11_ERF_FALSE='#' HAVE_CXX11_ERF_TRUE='' HAVE_CXX11_FINAL_FALSE='#' HAVE_CXX11_FINAL_TRUE='' HAVE_CXX11_FIXED_TYPE_ENUM_FALSE='#' HAVE_CXX11_FIXED_TYPE_ENUM_FWD_FALSE='#' HAVE_CXX11_FIXED_TYPE_ENUM_FWD_TRUE='' HAVE_CXX11_FIXED_TYPE_ENUM_TRUE='' HAVE_CXX11_INITIALIZER_LIST_FALSE='#' HAVE_CXX11_INITIALIZER_LIST_TRUE='' HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX_FALSE='#' HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX_TRUE='' HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_FALSE='#' HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_TRUE='' HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX_FALSE='#' HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX_TRUE='' HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_FALSE='#' HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_TRUE='' HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX_FALSE='#' HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX_TRUE='' HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_FALSE='#' HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_TRUE='' HAVE_CXX11_LAMBDA_FALSE='#' HAVE_CXX11_LAMBDA_TRUE='' HAVE_CXX11_MAKE_UNIQUE_WORKAROUND_FALSE='#' HAVE_CXX11_MAKE_UNIQUE_WORKAROUND_TRUE='' HAVE_CXX11_MOVE_CONSTRUCTORS_FALSE='#' HAVE_CXX11_MOVE_CONSTRUCTORS_TRUE='' HAVE_CXX11_NULLPTR_FALSE='#' HAVE_CXX11_NULLPTR_TRUE='' HAVE_CXX11_OVERRIDE_FALSE='#' HAVE_CXX11_OVERRIDE_TRUE='' HAVE_CXX11_RANGEFOR_FALSE='#' HAVE_CXX11_RANGEFOR_TRUE='' HAVE_CXX11_REGEX_FALSE='#' HAVE_CXX11_REGEX_TRUE='' HAVE_CXX11_RVALUE_REFERENCES_FALSE='#' HAVE_CXX11_RVALUE_REFERENCES_TRUE='' HAVE_CXX11_SHARED_PTR_FALSE='#' HAVE_CXX11_SHARED_PTR_TRUE='' HAVE_CXX11_THREAD_FALSE='#' HAVE_CXX11_THREAD_TRUE='' HAVE_CXX11_TO_STRING_FALSE='#' HAVE_CXX11_TO_STRING_TRUE='' HAVE_CXX11_TUPLE_FALSE='#' HAVE_CXX11_TUPLE_TRUE='' HAVE_CXX11_TYPE_TRAITS_FALSE='#' HAVE_CXX11_TYPE_TRAITS_TRUE='' HAVE_CXX11_UNIQUE_PTR_FALSE='#' HAVE_CXX11_UNIQUE_PTR_TRUE='' HAVE_CXX11_VARIADIC_TEMPLATES_FALSE='#' HAVE_CXX11_VARIADIC_TEMPLATES_TRUE='' HAVE_CXX14_MAKE_UNIQUE_FALSE='' HAVE_CXX14_MAKE_UNIQUE_TRUE='#' HAVE_CXX17_FALLTHROUGH_ATTRIBUTE_FALSE='' HAVE_CXX17_FALLTHROUGH_ATTRIBUTE_TRUE='#' HAVE_DOT='' HAVE_DOUBLE_UNDERSCORE_ATTRIBUTE_FALLTHROUGH_FALSE='' HAVE_DOUBLE_UNDERSCORE_ATTRIBUTE_FALLTHROUGH_TRUE='#' HAVE_GCOV_TOOLS='0' HDF5_CFLAGS='' HDF5_CPPFLAGS='' HDF5_CXXLIBS='' HDF5_DIR='' HDF5_FLIBS='' HDF5_LIBS='' HDF5_PREFIX='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LASPACK_INCLUDE='' LASPACK_LIB='' LD='/home/lin/.linuxbrew/bin/ld -m elf_x86_64' LDFLAGS='' LIBHILBERT_INCLUDE='' LIBHILBERT_LIBRARY='' LIBMESH_DBG_MODE_FALSE='#' LIBMESH_DBG_MODE_TRUE='' LIBMESH_DEVEL_MODE_FALSE='' LIBMESH_DEVEL_MODE_TRUE='#' LIBMESH_ENABLE_CAPNPROTO_FALSE='' LIBMESH_ENABLE_CAPNPROTO_TRUE='' LIBMESH_ENABLE_COMPLEX_FALSE='' LIBMESH_ENABLE_COMPLEX_TRUE='#' LIBMESH_ENABLE_CPPUNIT_FALSE='' LIBMESH_ENABLE_CPPUNIT_TRUE='' LIBMESH_ENABLE_CURL_FALSE='' LIBMESH_ENABLE_CURL_TRUE='' LIBMESH_ENABLE_EIGEN_FALSE='' LIBMESH_ENABLE_EIGEN_TRUE='' LIBMESH_ENABLE_EXAMPLES_FALSE='#' LIBMESH_ENABLE_EXAMPLES_TRUE='' LIBMESH_ENABLE_EXODUS_FALSE='' LIBMESH_ENABLE_EXODUS_TRUE='' LIBMESH_ENABLE_EXODUS_V509_FALSE='' LIBMESH_ENABLE_EXODUS_V509_TRUE='' LIBMESH_ENABLE_EXODUS_V522_FALSE='' LIBMESH_ENABLE_EXODUS_V522_TRUE='' LIBMESH_ENABLE_FPARSER_FALSE='' LIBMESH_ENABLE_FPARSER_TRUE='' LIBMESH_ENABLE_GLIBCXX_DEBUGGING_CPPUNIT_FALSE='' LIBMESH_ENABLE_GLIBCXX_DEBUGGING_CPPUNIT_TRUE='#' LIBMESH_ENABLE_GLIBCXX_DEBUGGING_FALSE='#' LIBMESH_ENABLE_GLIBCXX_DEBUGGING_TRUE='' LIBMESH_ENABLE_GLPK_FALSE='' LIBMESH_ENABLE_GLPK_TRUE='' LIBMESH_ENABLE_GMV_FALSE='' LIBMESH_ENABLE_GMV_TRUE='' LIBMESH_ENABLE_GZSTREAMS_FALSE='' LIBMESH_ENABLE_GZSTREAMS_TRUE='' LIBMESH_ENABLE_HDF5_FALSE='' LIBMESH_ENABLE_HDF5_TRUE='' LIBMESH_ENABLE_INFINITE_ELEMENTS_FALSE='#' LIBMESH_ENABLE_INFINITE_ELEMENTS_TRUE='' LIBMESH_ENABLE_LASPACK_FALSE='' LIBMESH_ENABLE_LASPACK_TRUE='' LIBMESH_ENABLE_LIBHILBERT_FALSE='' LIBMESH_ENABLE_LIBHILBERT_TRUE='' LIBMESH_ENABLE_METAPHYSICL_FALSE='' LIBMESH_ENABLE_METAPHYSICL_TRUE='' LIBMESH_ENABLE_METIS_FALSE='' LIBMESH_ENABLE_METIS_TRUE='' LIBMESH_ENABLE_NANOFLANN_FALSE='' LIBMESH_ENABLE_NANOFLANN_TRUE='' LIBMESH_ENABLE_NEMESIS_FALSE='' LIBMESH_ENABLE_NEMESIS_TRUE='' LIBMESH_ENABLE_NEMESIS_V309_FALSE='' LIBMESH_ENABLE_NEMESIS_V309_TRUE='' LIBMESH_ENABLE_NEMESIS_V522_FALSE='' LIBMESH_ENABLE_NEMESIS_V522_TRUE='' LIBMESH_ENABLE_NETCDF_FALSE='' LIBMESH_ENABLE_NETCDF_TRUE='' LIBMESH_ENABLE_NETCDF_V4_FALSE='' LIBMESH_ENABLE_NETCDF_V4_TRUE='' LIBMESH_ENABLE_NLOPT_FALSE='' LIBMESH_ENABLE_NLOPT_TRUE='' LIBMESH_ENABLE_PARMETIS_FALSE='' LIBMESH_ENABLE_PARMETIS_TRUE='' LIBMESH_ENABLE_PETSC_FALSE='' LIBMESH_ENABLE_PETSC_TRUE='' LIBMESH_ENABLE_QHULL_FALSE='' LIBMESH_ENABLE_QHULL_TRUE='' LIBMESH_ENABLE_SFC_FALSE='' LIBMESH_ENABLE_SFC_TRUE='' LIBMESH_ENABLE_SLEPC_FALSE='' LIBMESH_ENABLE_SLEPC_TRUE='' LIBMESH_ENABLE_TECIO_FALSE='' LIBMESH_ENABLE_TECIO_TRUE='' LIBMESH_ENABLE_TECPLOT_FALSE='' LIBMESH_ENABLE_TECPLOT_TRUE='' LIBMESH_ENABLE_TETGEN_FALSE='' LIBMESH_ENABLE_TETGEN_TRUE='' LIBMESH_ENABLE_TRIANGLE_FALSE='' LIBMESH_ENABLE_TRIANGLE_TRUE='' LIBMESH_ENABLE_VTK_FALSE='' LIBMESH_ENABLE_VTK_TRUE='' LIBMESH_INSTALL_INTERNAL_BOOST_FALSE='#' LIBMESH_INSTALL_INTERNAL_BOOST_TRUE='' LIBMESH_INSTALL_INTERNAL_EIGEN_FALSE='' LIBMESH_INSTALL_INTERNAL_EIGEN_TRUE='' LIBMESH_OPROF_MODE_FALSE='#' LIBMESH_OPROF_MODE_TRUE='' LIBMESH_OPT_MODE_FALSE='#' LIBMESH_OPT_MODE_TRUE='' LIBMESH_PROF_MODE_FALSE='' LIBMESH_PROF_MODE_TRUE='#' LIBMESH_VPATH_BUILD_FALSE='#' LIBMESH_VPATH_BUILD_TRUE='' LIBOBJS='' LIBS='-ldl ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LOCAL_CXX='' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINFO='${SHELL} /home/lin/projects/moose/libmesh/build-aux/missing makeinfo' MANIFEST_TOOL=':' METAPHYSICL_INCLUDE='' METHOD='' METHODS='opt oprof dbg' METIS_INCLUDE='' METIS_LIB='' MKDIR_P='/home/lin/.linuxbrew/bin/gmkdir -p' ML_INCLUDES='' ML_LIBS='' ML_MAKEFILE_EXPORT='' MPCXX='' MPI_IMPL='mpi' MPI_INCLUDES='-I/opt/moose/mpich-3.3/gcc-9.2.0/include' MPI_LDFLAGS='-L/opt/moose/mpich-3.3/gcc-9.2.0/lib' MPI_LIBS='-lmpi ' NANOFLANN_INCLUDE='' NEMESIS_INCLUDE='' NETCDF_INCLUDE='' NLOPT_INCLUDE='' NLOPT_LIBRARY='' NM='/home/lin/.linuxbrew/bin/nm -B' NMEDIT='' NODEPRECATEDFLAG='-Wno-deprecated' NOX_INCLUDES='' NOX_LIBS='' NOX_MAKEFILE_EXPORT='' OBJDUMP='objdump' OBJEXT='o' OPENMP_CFLAGS='' OPENMP_CXXFLAGS='' OPENMP_FFLAGS='' OPROFILE_FLAGS='-g -fno-omit-frame-pointer' OTOOL64='' OTOOL='' PACKAGE='libmesh' PACKAGE_BUGREPORT='libmesh-users@lists.sourceforge.net' PACKAGE_NAME='libmesh' PACKAGE_STRING='libmesh 1.6.0-pre' PACKAGE_TARNAME='libmesh' PACKAGE_URL='http://libmesh.github.io' PACKAGE_VERSION='1.6.0-pre' PARMETIS_INCLUDE='' PARMETIS_LIB='' PATH_SEPARATOR=':' PERL='/home/lin/.linuxbrew/bin/perl' PETSCARCH='' PETSCINCLUDEDIRS='-I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt//include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include -I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include' PETSCLINKLIBS='-Wl,-rpath,/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/lib -L/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/lib -Wl,-rpath,/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/lib -L/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/lib -Wl,-rpath,/opt/moose/mpich-3.3/gcc-9.2.0/lib -L/opt/moose/mpich-3.3/gcc-9.2.0/lib -Wl,-rpath,/opt/moose/gcc-9.2.0/lib/gcc/x86_64-pc-linux-gnu/9.2.0 -L/opt/moose/gcc-9.2.0/lib/gcc/x86_64-pc-linux-gnu/9.2.0 -Wl,-rpath,/opt/moose/gcc-9.2.0/lib64 -L/opt/moose/gcc-9.2.0/lib64 -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/opt/moose/gcc-9.2.0/lib -L/opt/moose/gcc-9.2.0/lib -lpetsc -lHYPRE -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lsuperlu_dist -lflapack -lfblas -lparmetis -lmetis -lptesmumps -lptscotchparmetis -lptscotch -lptscotcherr -lesmumps -lscotch -lscotcherr -lm -lX11 -lpthread -lstdc++ -ldl -lmpifort -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lrt -lm -lpthread -lz -lstdc++ -ldl' PETSC_ARCH='' PETSC_CC_INCLUDES='-I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include' PETSC_DIR='/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' PETSC_FC_INCLUDES='-I/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt/include' PKG_CONFIG='/home/lin/.linuxbrew/bin/pkg-config' PROFILING_FLAGS='-pg' PRTDIAG='' PTHREAD_CC='' PTHREAD_CFLAGS='' PTHREAD_LIBS='' PWD='/home/lin/projects/moose/libmesh/build' QHULL_LIBS='' RANLIB='ranlib' RPATHFLAG='-Wl,-rpath,' SED='/home/lin/.linuxbrew/bin/sed' SET_MAKE='' SFC_INCLUDE='' SFC_LIB='' SHELL='/bin/bash' SLEPC_DIR='' SLEPC_INCLUDE='' SLEPC_LIBS='' STRIP='strip' TBB_INCLUDE='' TBB_LIBRARY='' TECIO_CPPFLAGS='' TECIO_INCLUDE='' TETGEN_INCLUDE='' TETGEN_LIBRARY='' TPETRA_INCLUDES='' TPETRA_LIBS='' TPETRA_MAKEFILE_EXPORT='' TRIANGLE_INCLUDE='' TRIANGLE_LIBRARY='' TRILINOS_DIR='' TRILINOS_INCLUDES='' TRILINOS_LIBS='' TRILINOS_MAKEFILE_EXPORT='' VERSION='1.6.0-pre' VTK_DIR='' VTK_INCLUDE='' VTK_LIBRARY='' XZ='' YACC='' YFLAGS='' ac_ct_AR='ar' ac_ct_CC='' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc=' -I$(srcdir)' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='tar --format=ustar -chf - "$$tardir"' am__untar='tar -xf -' ax_pthread_config='' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' enabledeprecated='yes' enablefwdenums='yes' enablelegacyincludepaths='no' enablepetsc='no' enableuniqueptr='irrelevant' enablewarnings='no' exec_prefix='NONE' gitquery='' have_gcov='' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home/lin/projects/moose/libmesh/build-aux/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' libmesh_CFLAGS=' ' libmesh_CPPFLAGS='' libmesh_CXXFLAGS=' ' libmesh_LDFLAGS='' libmesh_contrib_INCLUDES='-I$(top_srcdir)/contrib/boost/include -I$(top_builddir)/contrib/timpi/src/utilities/include -I$(top_srcdir)/contrib/timpi/src/utilities/include -I$(top_srcdir)/contrib/timpi/src/parallel/include -I$(top_srcdir)/contrib/timpi/src/algorithms/include ' libmesh_installed_LIBS='' libmesh_optional_INCLUDES='-I/opt/moose/mpich-3.3/gcc-9.2.0/include ' libmesh_optional_LIBS='-L/opt/moose/mpich-3.3/gcc-9.2.0/lib -lmpi ' libmesh_pkgconfig_requires='' libmesh_precision_LIBS='' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' petscmajor='3' petscmajorminor='3.11.x' petscminor='11' petscversion='3.11.4' prefix='/home/lin/projects/moose/scripts/../libmesh/installed' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs='' sysconfdir='${prefix}/etc' target='x86_64-pc-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='pc' vtkbuild='' vtkmajor='' vtkversion='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "libmesh" #define PACKAGE_TARNAME "libmesh" #define PACKAGE_VERSION "1.6.0-pre" #define PACKAGE_STRING "libmesh 1.6.0-pre" #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" #define PACKAGE_URL "http://libmesh.github.io" #define CONFIGURE_INFO "/home/lin/projects/moose/scripts/../libmesh/configure 'INSTALL=/home/lin/projects/moose/scripts/../libmesh/build-aux/install-sh -C' '--with-methods=opt oprof dbg' '--prefix=/home/lin/projects/moose/scripts/../libmesh/installed' '--enable-silent-rules' '--enable-unique-id' '--disable-warnings' '--enable-glibcxx-debugging' '--with-thread-model=openmp' '--disable-maintainer-mode' '--enable-petsc-hypre-required' '--enable-metaphysicl-required' '--disable-vtk' 'PETSC_DIR=/opt/moose/petsc-3.11.4/mpich-3.3_gcc-9.2.0-opt' 'CC=mpicc' 'FC=mpif90' 'F77=mpif77' 'CXX=mpicxx' 'METHODS=opt oprof dbg'" #define PACKAGE "libmesh" #define VERSION "1.6.0-pre" #define HAVE_CXX11 1 #define HAVE_CXX11_AUTO 1 #define HAVE_CXX11_RANGEFOR 1 #define HAVE_CXX11_INITIALIZER_LIST 1 #define HAVE_CXX11_UNIQUE_PTR 1 #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 #define HAVE_CXX11_TUPLE 1 #define HAVE_CXX11_LAMBDA 1 #define HAVE_CXX11_FIXED_TYPE_ENUM 1 #define HAVE_CXX11_FIXED_TYPE_ENUM_FWD 1 #define HAVE_CXX11_OVERRIDE 1 #define HAVE_CXX11_MOVE_CONSTRUCTORS 1 #define HAVE_CXX11_DELETED_FUNCTIONS 1 #define HAVE_CXX11_DEFAULTED_FUNCTIONS 1 #define HAVE_CXX11_NULLPTR 1 #define HAVE_CXX11_FINAL 1 #define HAVE_CXX11_DECLTYPE 1 #define HAVE_CXX11_SHARED_PTR 1 #define HAVE_CXX11_RVALUE_REFERENCES 1 #define HAVE_CXX11_TO_STRING 1 #define HAVE_CXX11_CONSTEXPR 1 #define HAVE_CXX11_VARIADIC_TEMPLATES 1 #define HAVE_CXX11_ALIAS_DECLARATIONS 1 #define HAVE_CXX11_REGEX 1 #define HAVE_CXX11_THREAD 1 #define HAVE_CXX11_CONDITION_VARIABLE 1 #define HAVE_CXX11_TYPE_TRAITS 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 #define HAVE_CXX11_ERF 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define MAJOR_VERSION 1 #define MINOR_VERSION 6 #define MICRO_VERSION 0 #define LIB_VERSION "1.6.0-pre" #define LIB_RELEASE "" #define CXX "mpicxx" #define IO_COMPATIBILITY_VERSION "0.7.4" #define HAVE_NAMESPACES /**/ #define DEFAULT_DOUBLE_PRECISION 1 #define DEFAULT_SCALAR_TYPE double #define restrict __restrict #define HAVE_PWD_H 1 #define HAVE_GETPWUID 1 #define ENABLE_EXCEPTIONS 1 #define ENABLE_TIMESTAMPS 1 #define SIZEOF_SHORT_INT 2 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_SIZE_T 8 #define SIZEOF_LONG_INT 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_VOID_P 8 #define SIZEOF_FUNCTION_POINTER 8 #define HAVE_RTTI /**/ #define HAVE_GETOPT_H 1 #define HAVE_CSIGNAL 1 #define HAVE_SYS_RESOURCE_H 1 #define HAVE_LOCALE /**/ #define HAVE_SSTREAM /**/ #define HAVE_STRINGSTREAM /**/ #define HAVE_FENV_H 1 #define HAVE_XMMINTRIN_H 1 #define HAVE_FEENABLEEXCEPT 1 #define HAVE_FEDISABLEEXCEPT 1 #define HAVE_DECL_SIGACTION 1 #define HAVE_MKDIR /**/ #define HAVE_DECL__MKDIR 0 #define HAVE_SYS_UTSNAME_H 1 #define HAVE_STD_UNORDERED_MULTIMAP 1 #define BEST_UNORDERED_MULTIMAP std::unordered_multimap #define INCLUDE_UNORDERED_MULTIMAP #define HAVE_STD_UNORDERED_MAP 1 #define BEST_UNORDERED_MAP std::unordered_map #define INCLUDE_UNORDERED_MAP #define HAVE_STD_UNORDERED_MULTISET 1 #define BEST_UNORDERED_MULTISET std::unordered_multiset #define INCLUDE_UNORDERED_MULTISET #define HAVE_STD_UNORDERED_SET 1 #define BEST_UNORDERED_SET std::unordered_set #define INCLUDE_UNORDERED_SET #define HAVE_STD_HASH 1 #define BEST_HASH std::hash #define INCLUDE_HASH #define DEFINE_HASH_STRING /**/ #define DEFINE_HASH_POINTERS /**/ #define HAVE_DLOPEN 1 #define HAVE_GCC_ABI_DEMANGLE 1 #define HAVE_GLIBC_BACKTRACE 1 #define GDB_COMMAND "gdb" #define ENABLE_UNIQUE_PTR 1 #define ENABLE_DEPRECATED 1 #define FORWARD_DECLARE_ENUMS 1 #define REQUIRE_SEPARATE_NAMESPACE 1 #define BOUNDARY_ID_BYTES 2 #define DOF_ID_BYTES 4 #define PROCESSOR_ID_BYTES 4 #define SUBDOMAIN_ID_BYTES 2 #define ENABLE_UNIQUE_ID 1 #define UNIQUE_ID_BYTES 8 #define ENABLE_AMR 1 #define ENABLE_VSMOOTHER 1 #define ENABLE_PERIODIC 1 #define ENABLE_DIRICHLET 1 #define ENABLE_GHOSTED 1 #define ENABLE_NODE_VALENCE 1 #define DIM 3 #define ENABLE_HIGHER_ORDER_SHAPES 1 #define ENABLE_SECOND_DERIVATIVES 1 #define USE_REAL_NUMBERS 1 #define ENABLE_REFERENCE_COUNTING 1 #define HAVE_XDR 1 #define HAVE_BOOST 1 #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 #define HAVE_MPI 1 configure: exit 3