2019-08-03T10:26:14,618 Created temporary directory: /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-ephem-wheel-cache-sozvwegj
2019-08-03T10:26:14,619 Created temporary directory: /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-req-tracker-32ph9ln0
2019-08-03T10:26:14,619 Created requirements tracker '/private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-req-tracker-32ph9ln0'
2019-08-03T10:26:14,619 Created temporary directory: /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-install-i56kguux
2019-08-03T10:26:14,624 Collecting majiq from git+https://bitbucket.org/biociphers/majiq_stable.git#egg=majiq
2019-08-03T10:26:14,625   Cloning https://bitbucket.org/biociphers/majiq_stable.git to /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-install-i56kguux/majiq
2019-08-03T10:26:14,625   Running command git clone -q https://bitbucket.org/biociphers/majiq_stable.git /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-install-i56kguux/majiq
2019-08-03T10:26:17,131   Added majiq from git+https://bitbucket.org/biociphers/majiq_stable.git#egg=majiq to build tracker '/private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-req-tracker-32ph9ln0'
2019-08-03T10:26:17,132     Running setup.py (path:/private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-install-i56kguux/majiq/setup.py) egg_info for package majiq
2019-08-03T10:26:17,132     Running command python setup.py egg_info
2019-08-03T10:26:17,442     running egg_info
2019-08-03T10:26:17,443     creating pip-egg-info/majiq.egg-info
2019-08-03T10:26:17,443     writing pip-egg-info/majiq.egg-info/PKG-INFO
2019-08-03T10:26:17,443     writing dependency_links to pip-egg-info/majiq.egg-info/dependency_links.txt
2019-08-03T10:26:17,443     writing entry points to pip-egg-info/majiq.egg-info/entry_points.txt
2019-08-03T10:26:17,444     writing top-level names to pip-egg-info/majiq.egg-info/top_level.txt
2019-08-03T10:26:17,444     writing manifest file 'pip-egg-info/majiq.egg-info/SOURCES.txt'
2019-08-03T10:26:17,444     reading manifest file 'pip-egg-info/majiq.egg-info/SOURCES.txt'
2019-08-03T10:26:17,444     reading manifest template 'MANIFEST.in'
2019-08-03T10:26:17,448     writing manifest file 'pip-egg-info/majiq.egg-info/SOURCES.txt'
2019-08-03T10:26:17,480   Source in /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-install-i56kguux/majiq has version 2.1, which satisfies requirement majiq from git+https://bitbucket.org/biociphers/majiq_stable.git#egg=majiq
2019-08-03T10:26:17,480   Removed majiq from git+https://bitbucket.org/biociphers/majiq_stable.git#egg=majiq from build tracker '/private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-req-tracker-32ph9ln0'
2019-08-03T10:26:17,487 Building wheels for collected packages: majiq
2019-08-03T10:26:17,488   Created temporary directory: /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-wheel-56avw2am
2019-08-03T10:26:17,488   Destination directory: /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-wheel-56avw2am
2019-08-03T10:26:17,488   Running command /Users/nicog/env/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-install-i56kguux/majiq/setup.py'"'"'; __file__='"'"'/private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-install-i56kguux/majiq/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-wheel-56avw2am --python-tag cp37
2019-08-03T10:26:17,793   running bdist_wheel
2019-08-03T10:26:17,794   running build
2019-08-03T10:26:17,794   installing to build/bdist.macosx-10.14-x86_64/wheel
2019-08-03T10:26:17,794   running install
2019-08-03T10:26:17,795   0
2019-08-03T10:26:17,971   Compiling majiq/src/polyfitnb.pyx because it changed.
2019-08-03T10:26:17,971   Compiling majiq/src/build.pyx because it changed.
2019-08-03T10:26:17,971   Compiling majiq/src/calc_psi.pyx because it changed.
2019-08-03T10:26:17,971   Compiling majiq/src/deltapsi.pyx because it changed.
2019-08-03T10:26:17,971   Compiling majiq/src/io.pyx because it changed.
2019-08-03T10:26:17,971   Compiling voila/c/splice_graph_sql.pyx because it changed.
2019-08-03T10:26:17,971   [1/6] Cythonizing majiq/src/build.pyx
2019-08-03T10:26:19,236   [2/6] Cythonizing majiq/src/calc_psi.pyx
2019-08-03T10:26:19,726   [3/6] Cythonizing majiq/src/deltapsi.pyx
2019-08-03T10:26:20,382   [4/6] Cythonizing majiq/src/io.pyx
2019-08-03T10:26:20,967   [5/6] Cythonizing majiq/src/polyfitnb.pyx
2019-08-03T10:26:21,303   [6/6] Cythonizing voila/c/splice_graph_sql.pyx
2019-08-03T10:26:21,403   running install_lib
2019-08-03T10:26:21,406   running build_py
2019-08-03T10:26:21,427   creating build
2019-08-03T10:26:21,427   creating build/lib
2019-08-03T10:26:21,427   creating build/lib/majiq
2019-08-03T10:26:21,427   copying majiq/__init__.py -> build/lib/majiq
2019-08-03T10:26:21,427   copying majiq/run_majiq.py -> build/lib/majiq
2019-08-03T10:26:21,428   creating build/lib/voila
2019-08-03T10:26:21,428   copying voila/vlsv.py -> build/lib/voila
2019-08-03T10:26:21,428   copying voila/classifier.py -> build/lib/voila
2019-08-03T10:26:21,428   copying voila/as_types.py -> build/lib/voila
2019-08-03T10:26:21,429   copying voila/config.py -> build/lib/voila
2019-08-03T10:26:21,429   copying voila/index.py -> build/lib/voila
2019-08-03T10:26:21,429   copying voila/io_voila.py -> build/lib/voila
2019-08-03T10:26:21,429   copying voila/constants.py -> build/lib/voila
2019-08-03T10:26:21,430   copying voila/__init__.py -> build/lib/voila
2019-08-03T10:26:21,430   copying voila/tsv.py -> build/lib/voila
2019-08-03T10:26:21,430   copying voila/run_voila.py -> build/lib/voila
2019-08-03T10:26:21,430   copying voila/exceptions.py -> build/lib/voila
2019-08-03T10:26:21,431   copying voila/voila_log.py -> build/lib/voila
2019-08-03T10:26:21,431   creating build/lib/majiq/src
2019-08-03T10:26:21,431   copying majiq/src/config.py -> build/lib/majiq/src
2019-08-03T10:26:21,431   copying majiq/src/constants.py -> build/lib/majiq/src
2019-08-03T10:26:21,432   copying majiq/src/__init__.py -> build/lib/majiq/src
2019-08-03T10:26:21,432   copying majiq/src/logger.py -> build/lib/majiq/src
2019-08-03T10:26:21,432   copying majiq/src/gff.py -> build/lib/majiq/src
2019-08-03T10:26:21,432   copying majiq/src/basic_pipeline.py -> build/lib/majiq/src
2019-08-03T10:26:21,433   creating build/lib/majiq/src/internals
2019-08-03T10:26:21,433   copying majiq/src/internals/__init__.py -> build/lib/majiq/src/internals
2019-08-03T10:26:21,433   creating build/lib/voila/tools
2019-08-03T10:26:21,433   copying voila/tools/lsv_venns.py -> build/lib/voila/tools
2019-08-03T10:26:21,434   copying voila/tools/binary_like_arrays.py -> build/lib/voila/tools
2019-08-03T10:26:21,434   copying voila/tools/flattened_arrays.py -> build/lib/voila/tools
2019-08-03T10:26:21,434   copying voila/tools/remove_dpsi_priors.py -> build/lib/voila/tools
2019-08-03T10:26:21,435   copying voila/tools/lookup.py -> build/lib/voila/tools
2019-08-03T10:26:21,435   copying voila/tools/__init__.py -> build/lib/voila/tools
2019-08-03T10:26:21,435   copying voila/tools/junction_dictionary.py -> build/lib/voila/tools
2019-08-03T10:26:21,435   copying voila/tools/putative_cryptic_junctions.py -> build/lib/voila/tools
2019-08-03T10:26:21,436   copying voila/tools/interactive.py -> build/lib/voila/tools
2019-08-03T10:26:21,436   copying voila/tools/example_tool.py -> build/lib/voila/tools
2019-08-03T10:26:21,436   copying voila/tools/gen_voila_html_lines.py -> build/lib/voila/tools
2019-08-03T10:26:21,436   copying voila/tools/hello_caleb.py -> build/lib/voila/tools
2019-08-03T10:26:21,437   copying voila/tools/ctrl_psi_dictionary.py -> build/lib/voila/tools
2019-08-03T10:26:21,437   copying voila/tools/tests.py -> build/lib/voila/tools
2019-08-03T10:26:21,437   copying voila/tools/relatively_uniq.py -> build/lib/voila/tools
2019-08-03T10:26:21,437   copying voila/tools/find_binary_lsvs.py -> build/lib/voila/tools
2019-08-03T10:26:21,438   copying voila/tools/tool.py -> build/lib/voila/tools
2019-08-03T10:26:21,438   copying voila/tools/non_redundant_sets.py -> build/lib/voila/tools
2019-08-03T10:26:21,438   creating build/lib/voila/utils
2019-08-03T10:26:21,438   copying voila/utils/__init__.py -> build/lib/voila/utils
2019-08-03T10:26:21,439   copying voila/utils/utils_voila.py -> build/lib/voila/utils
2019-08-03T10:26:21,439   creating build/lib/voila/view
2019-08-03T10:26:21,439   copying voila/view/psi.py -> build/lib/voila/view
2019-08-03T10:26:21,440   copying voila/view/splicegraph.py -> build/lib/voila/view
2019-08-03T10:26:21,440   copying voila/view/heterogen.py -> build/lib/voila/view
2019-08-03T10:26:21,440   copying voila/view/__init__.py -> build/lib/voila/view
2019-08-03T10:26:21,440   copying voila/view/forms.py -> build/lib/voila/view
2019-08-03T10:26:21,440   copying voila/view/deltapsi.py -> build/lib/voila/view
2019-08-03T10:26:21,441   copying voila/view/datatables.py -> build/lib/voila/view
2019-08-03T10:26:21,441   copying voila/view/views.py -> build/lib/voila/view
2019-08-03T10:26:21,441   creating build/lib/voila/api
2019-08-03T10:26:21,441   copying voila/api/matrix_hdf5.py -> build/lib/voila/api
2019-08-03T10:26:21,442   copying voila/api/view_splice_graph.py -> build/lib/voila/api
2019-08-03T10:26:21,442   copying voila/api/matrix_utils.py -> build/lib/voila/api
2019-08-03T10:26:21,442   copying voila/api/__init__.py -> build/lib/voila/api
2019-08-03T10:26:21,442   copying voila/api/splice_graph.py -> build/lib/voila/api
2019-08-03T10:26:21,442   copying voila/api/view_matrix.py -> build/lib/voila/api
2019-08-03T10:26:21,443   creating build/lib/voila/c
2019-08-03T10:26:21,443   copying voila/c/__init__.py -> build/lib/voila/c
2019-08-03T10:26:21,443   creating build/lib/voila/tools/unittests
2019-08-03T10:26:21,443   copying voila/tools/unittests/test_junction_dictionary.py -> build/lib/voila/tools/unittests
2019-08-03T10:26:21,444   copying voila/tools/unittests/test_find_files.py -> build/lib/voila/tools/unittests
2019-08-03T10:26:21,444   copying voila/tools/unittests/__init__.py -> build/lib/voila/tools/unittests
2019-08-03T10:26:21,444   copying voila/tools/unittests/test_example_tool.py -> build/lib/voila/tools/unittests
2019-08-03T10:26:21,444   copying voila/tools/unittests/test_ctrl_psi_dictionary.py -> build/lib/voila/tools/unittests
2019-08-03T10:26:21,444   copying voila/tools/unittests/test_find_voila_files.py -> build/lib/voila/tools/unittests
2019-08-03T10:26:21,445   copying voila/tools/unittests/test_util_print_hello.py -> build/lib/voila/tools/unittests
2019-08-03T10:26:21,445   copying voila/tools/unittests/test_hello_caleb.py -> build/lib/voila/tools/unittests
2019-08-03T10:26:21,446   creating build/lib/voila/tools/utils
2019-08-03T10:26:21,446   copying voila/tools/utils/compare_dpsis.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,446   copying voila/tools/utils/merge_dicts.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,446   copying voila/tools/utils/most_common_elem.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,446   copying voila/tools/utils/__init__.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,446   copying voila/tools/utils/calebs_xrange.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,447   copying voila/tools/utils/string_to_bool.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,447   copying voila/tools/utils/all_pairwise.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,447   copying voila/tools/utils/io_caleb.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,448   copying voila/tools/utils/percent_through_list.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,448   copying voila/tools/utils/index_all.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,448   copying voila/tools/utils/find_files.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,449   copying voila/tools/utils/print_hello.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,449   copying voila/tools/utils/random_merge_numpy.py -> build/lib/voila/tools/utils
2019-08-03T10:26:21,449   running egg_info
2019-08-03T10:26:21,452   creating majiq.egg-info
2019-08-03T10:26:21,452   writing majiq.egg-info/PKG-INFO
2019-08-03T10:26:21,452   writing dependency_links to majiq.egg-info/dependency_links.txt
2019-08-03T10:26:21,452   writing entry points to majiq.egg-info/entry_points.txt
2019-08-03T10:26:21,453   writing requirements to majiq.egg-info/requires.txt
2019-08-03T10:26:21,453   writing top-level names to majiq.egg-info/top_level.txt
2019-08-03T10:26:21,453   writing manifest file 'majiq.egg-info/SOURCES.txt'
2019-08-03T10:26:21,456   reading manifest file 'majiq.egg-info/SOURCES.txt'
2019-08-03T10:26:21,456   reading manifest template 'MANIFEST.in'
2019-08-03T10:26:21,460   writing manifest file 'majiq.egg-info/SOURCES.txt'
2019-08-03T10:26:21,464   creating build/lib/majiq/data
2019-08-03T10:26:21,464   copying majiq/data/defaultprior.pickle -> build/lib/majiq/data
2019-08-03T10:26:21,464   copying majiq/data/git_version -> build/lib/majiq/data
2019-08-03T10:26:21,465   copying majiq/src/build.cpp -> build/lib/majiq/src
2019-08-03T10:26:21,467   copying majiq/src/calc_psi.cpp -> build/lib/majiq/src
2019-08-03T10:26:21,468   copying majiq/src/deltapsi.cpp -> build/lib/majiq/src
2019-08-03T10:26:21,470   copying majiq/src/io.cpp -> build/lib/majiq/src
2019-08-03T10:26:21,471   copying majiq/src/polyfitnb.cpp -> build/lib/majiq/src
2019-08-03T10:26:21,472   copying majiq/src/internals/grimoire.cpp -> build/lib/majiq/src/internals
2019-08-03T10:26:21,472   copying majiq/src/internals/io_bam.cpp -> build/lib/majiq/src/internals
2019-08-03T10:26:21,472   copying majiq/src/internals/psi.cpp -> build/lib/majiq/src/internals
2019-08-03T10:26:21,472   creating build/lib/voila/view/static
2019-08-03T10:26:21,473   creating build/lib/voila/view/static/css
2019-08-03T10:26:21,473   copying voila/view/static/css/copy_lsv.css -> build/lib/voila/view/static/css
2019-08-03T10:26:21,473   copying voila/view/static/css/custom.css -> build/lib/voila/view/static/css
2019-08-03T10:26:21,473   copying voila/view/static/css/index.css -> build/lib/voila/view/static/css
2019-08-03T10:26:21,474   copying voila/view/static/css/lsv.css -> build/lib/voila/view/static/css
2019-08-03T10:26:21,474   copying voila/view/static/css/multi_input.css -> build/lib/voila/view/static/css
2019-08-03T10:26:21,474   copying voila/view/static/css/summary.css -> build/lib/voila/view/static/css
2019-08-03T10:26:21,474   creating build/lib/voila/view/static/css/images
2019-08-03T10:26:21,474   copying voila/view/static/css/images/sort_asc.png -> build/lib/voila/view/static/css/images
2019-08-03T10:26:21,475   copying voila/view/static/css/images/sort_asc_disabled.png -> build/lib/voila/view/static/css/images
2019-08-03T10:26:21,475   copying voila/view/static/css/images/sort_both.png -> build/lib/voila/view/static/css/images
2019-08-03T10:26:21,475   copying voila/view/static/css/images/sort_desc.png -> build/lib/voila/view/static/css/images
2019-08-03T10:26:21,476   copying voila/view/static/css/images/sort_desc_disabled.png -> build/lib/voila/view/static/css/images
2019-08-03T10:26:21,476   creating build/lib/voila/view/static/css/lib
2019-08-03T10:26:21,476   copying voila/view/static/css/lib/jquery.dataTables.min.css -> build/lib/voila/view/static/css/lib
2019-08-03T10:26:21,476   copying voila/view/static/css/lib/pure-min.css -> build/lib/voila/view/static/css/lib
2019-08-03T10:26:21,477   copying voila/view/static/css/lib/sumoselect.min.css -> build/lib/voila/view/static/css/lib
2019-08-03T10:26:21,477   creating build/lib/voila/view/static/img
2019-08-03T10:26:21,477   copying voila/view/static/img/LogoOnly.svg -> build/lib/voila/view/static/img
2019-08-03T10:26:21,478   copying voila/view/static/img/LogoOnly_white.svg -> build/lib/voila/view/static/img
2019-08-03T10:26:21,478   copying voila/view/static/img/biociphers.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,480   copying voila/view/static/img/biociphers_header.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,480   copying voila/view/static/img/biociphers_wb.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,481   copying voila/view/static/img/download.svg -> build/lib/voila/view/static/img
2019-08-03T10:26:21,481   copying voila/view/static/img/favicon.ico -> build/lib/voila/view/static/img
2019-08-03T10:26:21,482   copying voila/view/static/img/hide.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,482   copying voila/view/static/img/left_arrow.svg -> build/lib/voila/view/static/img
2019-08-03T10:26:21,482   copying voila/view/static/img/penn.jpg -> build/lib/voila/view/static/img
2019-08-03T10:26:21,483   copying voila/view/static/img/remove.svg -> build/lib/voila/view/static/img
2019-08-03T10:26:21,483   copying voila/view/static/img/right_arrow.svg -> build/lib/voila/view/static/img
2019-08-03T10:26:21,483   copying voila/view/static/img/solve-icon16.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,484   copying voila/view/static/img/ucsc.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,484   copying voila/view/static/img/undo.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,484   copying voila/view/static/img/zoom_in.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,485   copying voila/view/static/img/zoom_out.png -> build/lib/voila/view/static/img
2019-08-03T10:26:21,485   creating build/lib/voila/view/static/js
2019-08-03T10:26:21,485   copying voila/view/static/js/ajax.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,485   copying voila/view/static/js/colors.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,486   copying voila/view/static/js/copy_lsv.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,486   copying voila/view/static/js/heatmap.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,486   copying voila/view/static/js/lsv.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,487   copying voila/view/static/js/lsvtools.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,487   copying voila/view/static/js/splicegraphs.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,487   copying voila/view/static/js/splicegraphtools.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,488   copying voila/view/static/js/table.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,488   copying voila/view/static/js/utils.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,488   copying voila/view/static/js/violin.js -> build/lib/voila/view/static/js
2019-08-03T10:26:21,489   creating build/lib/voila/view/static/js/lib
2019-08-03T10:26:21,489   copying voila/view/static/js/lib/clipboard.min.js -> build/lib/voila/view/static/js/lib
2019-08-03T10:26:21,489   copying voila/view/static/js/lib/d3-beeswarm.js -> build/lib/voila/view/static/js/lib
2019-08-03T10:26:21,490   copying voila/view/static/js/lib/d3.v5.min.js -> build/lib/voila/view/static/js/lib
2019-08-03T10:26:21,490   copying voila/view/static/js/lib/jquery.ba-throttle-debounce.min.js -> build/lib/voila/view/static/js/lib
2019-08-03T10:26:21,490   copying voila/view/static/js/lib/jquery.dataTables.min.js -> build/lib/voila/view/static/js/lib
2019-08-03T10:26:21,491   copying voila/view/static/js/lib/jquery.min.js -> build/lib/voila/view/static/js/lib
2019-08-03T10:26:21,491   copying voila/view/static/js/lib/jquery.sumoselect.min.js -> build/lib/voila/view/static/js/lib
2019-08-03T10:26:21,492   creating build/lib/voila/view/templates
2019-08-03T10:26:21,492   copying voila/view/templates/base.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,492   copying voila/view/templates/base_index.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,492   copying voila/view/templates/base_summary.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,493   copying voila/view/templates/dpsi_index.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,493   copying voila/view/templates/dpsi_summary.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,493   copying voila/view/templates/het_index.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,493   copying voila/view/templates/het_summary.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,494   copying voila/view/templates/psi_index.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,494   copying voila/view/templates/psi_summary.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,494   copying voila/view/templates/sg_summary.html -> build/lib/voila/view/templates
2019-08-03T10:26:21,495   copying voila/api/model.sql -> build/lib/voila/api
2019-08-03T10:26:21,495   copying voila/c/splice_graph_sql.cpp -> build/lib/voila/c
2019-08-03T10:26:21,495   copying voila/c/sqlite3.c -> build/lib/voila/c
2019-08-03T10:26:21,506   running build_ext
2019-08-03T10:26:21,508   building 'majiq.src.polyfitnb' extension
2019-08-03T10:26:21,508   creating build/temp.macosx-10.14-x86_64-3.7
2019-08-03T10:26:21,508   creating build/temp.macosx-10.14-x86_64-3.7/majiq
2019-08-03T10:26:21,508   creating build/temp.macosx-10.14-x86_64-3.7/majiq/src
2019-08-03T10:26:21,508   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/polyfitnb.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/polyfitnb.o
2019-08-03T10:26:21,613   In file included from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
2019-08-03T10:26:21,614                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-08-03T10:26:21,614                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-08-03T10:26:21,614                    from majiq/src/polyfitnb.cpp:632:
2019-08-03T10:26:21,614   /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-08-03T10:26:21,614      17 | #warning "Using deprecated NumPy API, disable it with " \
2019-08-03T10:26:21,614         |  ^~~~~~~
2019-08-03T10:26:25,342   /usr/local/bin/g++-9 -bundle -undefined dynamic_lookup -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk build/temp.macosx-10.14-x86_64-3.7/majiq/src/polyfitnb.o -L/usr/local/lib -L/usr/local/opt/openssl/lib -L/usr/local/opt/sqlite/lib -o build/lib/majiq/src/polyfitnb.cpython-37m-darwin.so
2019-08-03T10:26:25,374   building 'majiq.src.build' extension
2019-08-03T10:26:25,374   creating build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals
2019-08-03T10:26:25,374   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I./majiq/src/internals -I./voila/c -Imajiq/src/internals -Ivoila/c -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/build.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/build.o -fopenmp -DSCYTHE_COMPILE_DIRECT -DSCYTHE_PTHREAD
2019-08-03T10:26:25,490   In file included from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
2019-08-03T10:26:25,490                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-08-03T10:26:25,490                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-08-03T10:26:25,490                    from majiq/src/build.cpp:673:
2019-08-03T10:26:25,490   /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-08-03T10:26:25,490      17 | #warning "Using deprecated NumPy API, disable it with " \
2019-08-03T10:26:25,491         |  ^~~~~~~
2019-08-03T10:26:41,195   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I./majiq/src/internals -I./voila/c -Imajiq/src/internals -Ivoila/c -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/internals/io_bam.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals/io_bam.o -fopenmp -DSCYTHE_COMPILE_DIRECT -DSCYTHE_PTHREAD
2019-08-03T10:26:45,149   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I./majiq/src/internals -I./voila/c -Imajiq/src/internals -Ivoila/c -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/internals/grimoire.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals/grimoire.o -fopenmp -DSCYTHE_COMPILE_DIRECT -DSCYTHE_PTHREAD
2019-08-03T10:26:49,543   /usr/local/bin/g++-9 -bundle -undefined dynamic_lookup -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk build/temp.macosx-10.14-x86_64-3.7/majiq/src/build.o build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals/io_bam.o build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals/grimoire.o -L/usr/local/lib -Lmajiq/src/internals -L/usr/local/lib -L/usr/local/opt/openssl/lib -L/usr/local/opt/sqlite/lib -L/usr/local/lib -Lmajiq/src/internals -lhts -lz -o build/lib/majiq/src/build.cpython-37m-darwin.so -lgomp
2019-08-03T10:26:49,598   building 'majiq.src.calc_psi' extension
2019-08-03T10:26:49,598   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I./majiq/src/internals -Imajiq/src/internals -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/calc_psi.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/calc_psi.o -fopenmp -DSCYTHE_COMPILE_DIRECT -DSCYTHE_PTHREAD
2019-08-03T10:26:49,714   In file included from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
2019-08-03T10:26:49,714                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-08-03T10:26:49,714                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-08-03T10:26:49,714                    from majiq/src/calc_psi.cpp:662:
2019-08-03T10:26:49,714   /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-08-03T10:26:49,714      17 | #warning "Using deprecated NumPy API, disable it with " \
2019-08-03T10:26:49,714         |  ^~~~~~~
2019-08-03T10:26:53,877   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I./majiq/src/internals -Imajiq/src/internals -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/internals/psi.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals/psi.o -fopenmp -DSCYTHE_COMPILE_DIRECT -DSCYTHE_PTHREAD
2019-08-03T10:26:57,128   /usr/local/bin/g++-9 -bundle -undefined dynamic_lookup -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk build/temp.macosx-10.14-x86_64-3.7/majiq/src/calc_psi.o build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals/psi.o -Lmajiq/src/internals -L/usr/local/lib -L/usr/local/opt/openssl/lib -L/usr/local/opt/sqlite/lib -Lmajiq/src/internals -o build/lib/majiq/src/calc_psi.cpython-37m-darwin.so -lgomp
2019-08-03T10:26:57,163   building 'majiq.src.deltapsi' extension
2019-08-03T10:26:57,163   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I./majiq/src/internals -Imajiq/src/internals -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/deltapsi.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/deltapsi.o -fopenmp -DSCYTHE_COMPILE_DIRECT -DSCYTHE_PTHREAD
2019-08-03T10:26:57,281   In file included from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
2019-08-03T10:26:57,281                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-08-03T10:26:57,281                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-08-03T10:26:57,281                    from majiq/src/deltapsi.cpp:662:
2019-08-03T10:26:57,281   /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-08-03T10:26:57,281      17 | #warning "Using deprecated NumPy API, disable it with " \
2019-08-03T10:26:57,281         |  ^~~~~~~
2019-08-03T10:27:09,635   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I./majiq/src/internals -Imajiq/src/internals -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/internals/psi.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals/psi.o -fopenmp -DSCYTHE_COMPILE_DIRECT -DSCYTHE_PTHREAD
2019-08-03T10:27:13,056   /usr/local/bin/g++-9 -bundle -undefined dynamic_lookup -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk build/temp.macosx-10.14-x86_64-3.7/majiq/src/deltapsi.o build/temp.macosx-10.14-x86_64-3.7/majiq/src/internals/psi.o -Lmajiq/src/internals -L/usr/local/lib -L/usr/local/opt/openssl/lib -L/usr/local/opt/sqlite/lib -Lmajiq/src/internals -o build/lib/majiq/src/deltapsi.cpython-37m-darwin.so -lgomp
2019-08-03T10:27:13,101   building 'majiq.src.io' extension
2019-08-03T10:27:13,102   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -I./majiq/src/internals -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -Imajiq/src/internals -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c majiq/src/io.cpp -o build/temp.macosx-10.14-x86_64-3.7/majiq/src/io.o -fopenmp
2019-08-03T10:27:13,224   In file included from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
2019-08-03T10:27:13,224                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-08-03T10:27:13,225                    from /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-08-03T10:27:13,225                    from majiq/src/io.cpp:653:
2019-08-03T10:27:13,225   /Users/nicog/env/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-08-03T10:27:13,225      17 | #warning "Using deprecated NumPy API, disable it with " \
2019-08-03T10:27:13,225         |  ^~~~~~~
2019-08-03T10:27:14,191   majiq/src/io.cpp:5309:18: warning: 'PyObject* __pyx_f_5majiq_3src_2io__get_extract_lsv_list(PyObject*, PyObject*)' defined but not used [-Wunused-function]
2019-08-03T10:27:14,191    5309 | static PyObject *__pyx_f_5majiq_3src_2io__get_extract_lsv_list(PyObject *__pyx_v_list_of_lsv_id, PyObject *__pyx_v_file_list) {
2019-08-03T10:27:14,191         |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2019-08-03T10:27:23,006   /usr/local/bin/g++-9 -bundle -undefined dynamic_lookup -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk build/temp.macosx-10.14-x86_64-3.7/majiq/src/io.o -L/usr/local/lib -L/usr/local/opt/openssl/lib -L/usr/local/opt/sqlite/lib -o build/lib/majiq/src/io.cpython-37m-darwin.so -lgomp
2019-08-03T10:27:23,042   building 'voila.c.splice_graph_sql' extension
2019-08-03T10:27:23,042   creating build/temp.macosx-10.14-x86_64-3.7/voila
2019-08-03T10:27:23,042   creating build/temp.macosx-10.14-x86_64-3.7/voila/c
2019-08-03T10:27:23,042   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -Ivoila/c -I./voila/c -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c voila/c/splice_graph_sql.cpp -o build/temp.macosx-10.14-x86_64-3.7/voila/c/splice_graph_sql.o -fopenmp
2019-08-03T10:27:23,841   /usr/local/bin/gcc-9 -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -Ivoila/c -I./voila/c -I/Users/nicog/env/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/local/opt/openssl/include -I/usr/local/opt/sqlite/include -I/Users/nicog/env/include -I/usr/local/Cellar/python/3.7.4/Frameworks/Python.framework/Versions/3.7/include/python3.7m -c voila/c/sqlite3.c -o build/temp.macosx-10.14-x86_64-3.7/voila/c/sqlite3.o -fopenmp
2019-08-03T10:28:03,481   /usr/local/bin/g++-9 -bundle -undefined dynamic_lookup -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk build/temp.macosx-10.14-x86_64-3.7/voila/c/splice_graph_sql.o build/temp.macosx-10.14-x86_64-3.7/voila/c/sqlite3.o -L/usr/local/lib -L/usr/local/opt/openssl/lib -L/usr/local/opt/sqlite/lib -o build/lib/voila/c/splice_graph_sql.cpython-37m-darwin.so -lgomp
2019-08-03T10:28:03,539   creating build/bdist.macosx-10.14-x86_64
2019-08-03T10:28:03,539   creating build/bdist.macosx-10.14-x86_64/wheel
2019-08-03T10:28:03,539   creating build/bdist.macosx-10.14-x86_64/wheel/majiq
2019-08-03T10:28:03,539   copying build/lib/majiq/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq
2019-08-03T10:28:03,539   copying build/lib/majiq/run_majiq.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq
2019-08-03T10:28:03,540   creating build/bdist.macosx-10.14-x86_64/wheel/majiq/data
2019-08-03T10:28:03,540   copying build/lib/majiq/data/defaultprior.pickle -> build/bdist.macosx-10.14-x86_64/wheel/majiq/data
2019-08-03T10:28:03,541   copying build/lib/majiq/data/git_version -> build/bdist.macosx-10.14-x86_64/wheel/majiq/data
2019-08-03T10:28:03,542   creating build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,542   copying build/lib/majiq/src/calc_psi.cpython-37m-darwin.so -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,546   copying build/lib/majiq/src/config.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,546   copying build/lib/majiq/src/io.cpython-37m-darwin.so -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,550   copying build/lib/majiq/src/constants.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,550   copying build/lib/majiq/src/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,550   copying build/lib/majiq/src/logger.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,551   copying build/lib/majiq/src/calc_psi.cpp -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,554   copying build/lib/majiq/src/polyfitnb.cpp -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,558   creating build/bdist.macosx-10.14-x86_64/wheel/majiq/src/internals
2019-08-03T10:28:03,558   copying build/lib/majiq/src/internals/psi.cpp -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src/internals
2019-08-03T10:28:03,559   copying build/lib/majiq/src/internals/io_bam.cpp -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src/internals
2019-08-03T10:28:03,559   copying build/lib/majiq/src/internals/grimoire.cpp -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src/internals
2019-08-03T10:28:03,560   copying build/lib/majiq/src/internals/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src/internals
2019-08-03T10:28:03,560   copying build/lib/majiq/src/io.cpp -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,564   copying build/lib/majiq/src/gff.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,564   copying build/lib/majiq/src/polyfitnb.cpython-37m-darwin.so -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,566   copying build/lib/majiq/src/build.cpython-37m-darwin.so -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,570   copying build/lib/majiq/src/build.cpp -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,574   copying build/lib/majiq/src/deltapsi.cpython-37m-darwin.so -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,577   copying build/lib/majiq/src/deltapsi.cpp -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,580   copying build/lib/majiq/src/basic_pipeline.py -> build/bdist.macosx-10.14-x86_64/wheel/majiq/src
2019-08-03T10:28:03,580   creating build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,581   copying build/lib/voila/vlsv.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,581   creating build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,581   copying build/lib/voila/tools/lsv_venns.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,582   copying build/lib/voila/tools/binary_like_arrays.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,583   copying build/lib/voila/tools/flattened_arrays.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,583   copying build/lib/voila/tools/remove_dpsi_priors.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,584   copying build/lib/voila/tools/lookup.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,584   creating build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,584   copying build/lib/voila/tools/unittests/test_junction_dictionary.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,585   copying build/lib/voila/tools/unittests/test_find_files.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,585   copying build/lib/voila/tools/unittests/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,586   copying build/lib/voila/tools/unittests/test_example_tool.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,586   copying build/lib/voila/tools/unittests/test_ctrl_psi_dictionary.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,586   copying build/lib/voila/tools/unittests/test_find_voila_files.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,587   copying build/lib/voila/tools/unittests/test_util_print_hello.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,587   copying build/lib/voila/tools/unittests/test_hello_caleb.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/unittests
2019-08-03T10:28:03,587   copying build/lib/voila/tools/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,588   creating build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,588   copying build/lib/voila/tools/utils/compare_dpsis.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,588   copying build/lib/voila/tools/utils/merge_dicts.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,589   copying build/lib/voila/tools/utils/most_common_elem.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,589   copying build/lib/voila/tools/utils/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,589   copying build/lib/voila/tools/utils/calebs_xrange.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,589   copying build/lib/voila/tools/utils/string_to_bool.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,590   copying build/lib/voila/tools/utils/all_pairwise.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,590   copying build/lib/voila/tools/utils/io_caleb.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,591   copying build/lib/voila/tools/utils/percent_through_list.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,591   copying build/lib/voila/tools/utils/index_all.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,591   copying build/lib/voila/tools/utils/find_files.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,592   copying build/lib/voila/tools/utils/print_hello.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,592   copying build/lib/voila/tools/utils/random_merge_numpy.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools/utils
2019-08-03T10:28:03,592   copying build/lib/voila/tools/junction_dictionary.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,593   copying build/lib/voila/tools/putative_cryptic_junctions.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,593   copying build/lib/voila/tools/interactive.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,593   copying build/lib/voila/tools/example_tool.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,594   copying build/lib/voila/tools/gen_voila_html_lines.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,594   copying build/lib/voila/tools/hello_caleb.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,595   copying build/lib/voila/tools/ctrl_psi_dictionary.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,595   copying build/lib/voila/tools/tests.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,595   copying build/lib/voila/tools/relatively_uniq.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,596   copying build/lib/voila/tools/find_binary_lsvs.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,596   copying build/lib/voila/tools/tool.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,597   copying build/lib/voila/tools/non_redundant_sets.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/tools
2019-08-03T10:28:03,597   copying build/lib/voila/classifier.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,598   copying build/lib/voila/as_types.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,598   copying build/lib/voila/config.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,599   copying build/lib/voila/index.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,599   copying build/lib/voila/io_voila.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,599   copying build/lib/voila/constants.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,599   copying build/lib/voila/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,600   copying build/lib/voila/tsv.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,600   creating build/bdist.macosx-10.14-x86_64/wheel/voila/utils
2019-08-03T10:28:03,600   copying build/lib/voila/utils/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/utils
2019-08-03T10:28:03,601   copying build/lib/voila/utils/utils_voila.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/utils
2019-08-03T10:28:03,601   copying build/lib/voila/run_voila.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,602   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,602   copying build/lib/voila/view/psi.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,602   copying build/lib/voila/view/splicegraph.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,602   copying build/lib/voila/view/heterogen.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,603   copying build/lib/voila/view/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,603   copying build/lib/voila/view/forms.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,603   copying build/lib/voila/view/deltapsi.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,604   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view/static
2019-08-03T10:28:03,604   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css
2019-08-03T10:28:03,604   copying build/lib/voila/view/static/css/lsv.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css
2019-08-03T10:28:03,605   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/images
2019-08-03T10:28:03,605   copying build/lib/voila/view/static/css/images/sort_asc_disabled.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/images
2019-08-03T10:28:03,605   copying build/lib/voila/view/static/css/images/sort_both.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/images
2019-08-03T10:28:03,606   copying build/lib/voila/view/static/css/images/sort_desc_disabled.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/images
2019-08-03T10:28:03,606   copying build/lib/voila/view/static/css/images/sort_desc.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/images
2019-08-03T10:28:03,606   copying build/lib/voila/view/static/css/images/sort_asc.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/images
2019-08-03T10:28:03,607   copying build/lib/voila/view/static/css/custom.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css
2019-08-03T10:28:03,607   copying build/lib/voila/view/static/css/index.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css
2019-08-03T10:28:03,607   copying build/lib/voila/view/static/css/multi_input.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css
2019-08-03T10:28:03,608   copying build/lib/voila/view/static/css/summary.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css
2019-08-03T10:28:03,608   copying build/lib/voila/view/static/css/copy_lsv.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css
2019-08-03T10:28:03,608   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/lib
2019-08-03T10:28:03,608   copying build/lib/voila/view/static/css/lib/sumoselect.min.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/lib
2019-08-03T10:28:03,609   copying build/lib/voila/view/static/css/lib/pure-min.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/lib
2019-08-03T10:28:03,609   copying build/lib/voila/view/static/css/lib/jquery.dataTables.min.css -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/css/lib
2019-08-03T10:28:03,610   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,610   copying build/lib/voila/view/static/js/copy_lsv.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,610   copying build/lib/voila/view/static/js/lsv.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,611   copying build/lib/voila/view/static/js/splicegraphs.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,612   copying build/lib/voila/view/static/js/heatmap.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,612   copying build/lib/voila/view/static/js/ajax.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,613   copying build/lib/voila/view/static/js/table.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,613   copying build/lib/voila/view/static/js/violin.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,614   copying build/lib/voila/view/static/js/colors.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,614   copying build/lib/voila/view/static/js/lsvtools.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,615   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js/lib
2019-08-03T10:28:03,615   copying build/lib/voila/view/static/js/lib/clipboard.min.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js/lib
2019-08-03T10:28:03,615   copying build/lib/voila/view/static/js/lib/jquery.min.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js/lib
2019-08-03T10:28:03,616   copying build/lib/voila/view/static/js/lib/jquery.dataTables.min.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js/lib
2019-08-03T10:28:03,617   copying build/lib/voila/view/static/js/lib/jquery.ba-throttle-debounce.min.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js/lib
2019-08-03T10:28:03,618   copying build/lib/voila/view/static/js/lib/jquery.sumoselect.min.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js/lib
2019-08-03T10:28:03,618   copying build/lib/voila/view/static/js/lib/d3.v5.min.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js/lib
2019-08-03T10:28:03,619   copying build/lib/voila/view/static/js/lib/d3-beeswarm.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js/lib
2019-08-03T10:28:03,620   copying build/lib/voila/view/static/js/utils.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,620   copying build/lib/voila/view/static/js/splicegraphtools.js -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/js
2019-08-03T10:28:03,620   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,620   copying build/lib/voila/view/static/img/favicon.ico -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,622   copying build/lib/voila/view/static/img/solve-icon16.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,622   copying build/lib/voila/view/static/img/ucsc.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,622   copying build/lib/voila/view/static/img/right_arrow.svg -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,622   copying build/lib/voila/view/static/img/biociphers_header.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,623   copying build/lib/voila/view/static/img/zoom_in.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,623   copying build/lib/voila/view/static/img/left_arrow.svg -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,624   copying build/lib/voila/view/static/img/download.svg -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,624   copying build/lib/voila/view/static/img/zoom_out.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,624   copying build/lib/voila/view/static/img/LogoOnly_white.svg -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,625   copying build/lib/voila/view/static/img/penn.jpg -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,625   copying build/lib/voila/view/static/img/undo.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,625   copying build/lib/voila/view/static/img/LogoOnly.svg -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,626   copying build/lib/voila/view/static/img/biociphers.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,630   copying build/lib/voila/view/static/img/remove.svg -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,631   copying build/lib/voila/view/static/img/biociphers_wb.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,631   copying build/lib/voila/view/static/img/hide.png -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/static/img
2019-08-03T10:28:03,631   creating build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,631   copying build/lib/voila/view/templates/het_summary.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,632   copying build/lib/voila/view/templates/base_summary.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,633   copying build/lib/voila/view/templates/het_index.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,633   copying build/lib/voila/view/templates/sg_summary.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,633   copying build/lib/voila/view/templates/base.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,633   copying build/lib/voila/view/templates/psi_summary.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,634   copying build/lib/voila/view/templates/dpsi_index.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,634   copying build/lib/voila/view/templates/dpsi_summary.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,634   copying build/lib/voila/view/templates/base_index.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,635   copying build/lib/voila/view/templates/psi_index.html -> build/bdist.macosx-10.14-x86_64/wheel/voila/view/templates
2019-08-03T10:28:03,635   copying build/lib/voila/view/datatables.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,635   copying build/lib/voila/view/views.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/view
2019-08-03T10:28:03,636   creating build/bdist.macosx-10.14-x86_64/wheel/voila/api
2019-08-03T10:28:03,636   copying build/lib/voila/api/matrix_hdf5.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/api
2019-08-03T10:28:03,636   copying build/lib/voila/api/view_splice_graph.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/api
2019-08-03T10:28:03,637   copying build/lib/voila/api/matrix_utils.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/api
2019-08-03T10:28:03,637   copying build/lib/voila/api/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/api
2019-08-03T10:28:03,637   copying build/lib/voila/api/splice_graph.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/api
2019-08-03T10:28:03,637   copying build/lib/voila/api/view_matrix.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/api
2019-08-03T10:28:03,638   copying build/lib/voila/api/model.sql -> build/bdist.macosx-10.14-x86_64/wheel/voila/api
2019-08-03T10:28:03,638   copying build/lib/voila/exceptions.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,639   creating build/bdist.macosx-10.14-x86_64/wheel/voila/c
2019-08-03T10:28:03,639   copying build/lib/voila/c/splice_graph_sql.cpp -> build/bdist.macosx-10.14-x86_64/wheel/voila/c
2019-08-03T10:28:03,640   copying build/lib/voila/c/sqlite3.c -> build/bdist.macosx-10.14-x86_64/wheel/voila/c
2019-08-03T10:28:03,650   copying build/lib/voila/c/__init__.py -> build/bdist.macosx-10.14-x86_64/wheel/voila/c
2019-08-03T10:28:03,651   copying build/lib/voila/c/splice_graph_sql.cpython-37m-darwin.so -> build/bdist.macosx-10.14-x86_64/wheel/voila/c
2019-08-03T10:28:03,652   copying build/lib/voila/voila_log.py -> build/bdist.macosx-10.14-x86_64/wheel/voila
2019-08-03T10:28:03,653   running install_egg_info
2019-08-03T10:28:03,658   Copying majiq.egg-info to build/bdist.macosx-10.14-x86_64/wheel/majiq-2.1-py3.7.egg-info
2019-08-03T10:28:03,662   running install_scripts
2019-08-03T10:28:03,678   creating build/bdist.macosx-10.14-x86_64/wheel/majiq-2.1.dist-info/WHEEL
2019-08-03T10:28:03,679   creating '/private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-wheel-56avw2am/majiq-2.1-cp37-none-any.whl' and adding 'build/bdist.macosx-10.14-x86_64/wheel' to it
2019-08-03T10:28:03,679   adding 'majiq/__init__.py'
2019-08-03T10:28:03,680   adding 'majiq/run_majiq.py'
2019-08-03T10:28:03,680   adding 'majiq/data/defaultprior.pickle'
2019-08-03T10:28:03,680   adding 'majiq/data/git_version'
2019-08-03T10:28:03,680   adding 'majiq/src/__init__.py'
2019-08-03T10:28:03,681   adding 'majiq/src/basic_pipeline.py'
2019-08-03T10:28:03,708   adding 'majiq/src/build.cpp'
2019-08-03T10:28:03,748   adding 'majiq/src/build.cpython-37m-darwin.so'
2019-08-03T10:28:03,762   adding 'majiq/src/calc_psi.cpp'
2019-08-03T10:28:03,775   adding 'majiq/src/calc_psi.cpython-37m-darwin.so'
2019-08-03T10:28:03,776   adding 'majiq/src/config.py'
2019-08-03T10:28:03,776   adding 'majiq/src/constants.py'
2019-08-03T10:28:03,789   adding 'majiq/src/deltapsi.cpp'
2019-08-03T10:28:03,808   adding 'majiq/src/deltapsi.cpython-37m-darwin.so'
2019-08-03T10:28:03,809   adding 'majiq/src/gff.py'
2019-08-03T10:28:03,822   adding 'majiq/src/io.cpp'
2019-08-03T10:28:03,838   adding 'majiq/src/io.cpython-37m-darwin.so'
2019-08-03T10:28:03,839   adding 'majiq/src/logger.py'
2019-08-03T10:28:03,848   adding 'majiq/src/polyfitnb.cpp'
2019-08-03T10:28:03,856   adding 'majiq/src/polyfitnb.cpython-37m-darwin.so'
2019-08-03T10:28:03,857   adding 'majiq/src/internals/__init__.py'
2019-08-03T10:28:03,857   adding 'majiq/src/internals/grimoire.cpp'
2019-08-03T10:28:03,858   adding 'majiq/src/internals/io_bam.cpp'
2019-08-03T10:28:03,859   adding 'majiq/src/internals/psi.cpp'
2019-08-03T10:28:03,859   adding 'voila/__init__.py'
2019-08-03T10:28:03,860   adding 'voila/as_types.py'
2019-08-03T10:28:03,860   adding 'voila/classifier.py'
2019-08-03T10:28:03,861   adding 'voila/config.py'
2019-08-03T10:28:03,861   adding 'voila/constants.py'
2019-08-03T10:28:03,861   adding 'voila/exceptions.py'
2019-08-03T10:28:03,862   adding 'voila/index.py'
2019-08-03T10:28:03,862   adding 'voila/io_voila.py'
2019-08-03T10:28:03,862   adding 'voila/run_voila.py'
2019-08-03T10:28:03,863   adding 'voila/tsv.py'
2019-08-03T10:28:03,863   adding 'voila/vlsv.py'
2019-08-03T10:28:03,863   adding 'voila/voila_log.py'
2019-08-03T10:28:03,864   adding 'voila/api/__init__.py'
2019-08-03T10:28:03,864   adding 'voila/api/matrix_hdf5.py'
2019-08-03T10:28:03,864   adding 'voila/api/matrix_utils.py'
2019-08-03T10:28:03,865   adding 'voila/api/model.sql'
2019-08-03T10:28:03,865   adding 'voila/api/splice_graph.py'
2019-08-03T10:28:03,866   adding 'voila/api/view_matrix.py'
2019-08-03T10:28:03,866   adding 'voila/api/view_splice_graph.py'
2019-08-03T10:28:03,867   adding 'voila/c/__init__.py'
2019-08-03T10:28:03,870   adding 'voila/c/splice_graph_sql.cpp'
2019-08-03T10:28:03,927   adding 'voila/c/splice_graph_sql.cpython-37m-darwin.so'
2019-08-03T10:28:04,174   adding 'voila/c/sqlite3.c'
2019-08-03T10:28:04,191   adding 'voila/tools/__init__.py'
2019-08-03T10:28:04,192   adding 'voila/tools/binary_like_arrays.py'
2019-08-03T10:28:04,192   adding 'voila/tools/ctrl_psi_dictionary.py'
2019-08-03T10:28:04,192   adding 'voila/tools/example_tool.py'
2019-08-03T10:28:04,195   adding 'voila/tools/find_binary_lsvs.py'
2019-08-03T10:28:04,195   adding 'voila/tools/flattened_arrays.py'
2019-08-03T10:28:04,196   adding 'voila/tools/gen_voila_html_lines.py'
2019-08-03T10:28:04,196   adding 'voila/tools/hello_caleb.py'
2019-08-03T10:28:04,196   adding 'voila/tools/interactive.py'
2019-08-03T10:28:04,196   adding 'voila/tools/junction_dictionary.py'
2019-08-03T10:28:04,197   adding 'voila/tools/lookup.py'
2019-08-03T10:28:04,198   adding 'voila/tools/lsv_venns.py'
2019-08-03T10:28:04,198   adding 'voila/tools/non_redundant_sets.py'
2019-08-03T10:28:04,199   adding 'voila/tools/putative_cryptic_junctions.py'
2019-08-03T10:28:04,200   adding 'voila/tools/relatively_uniq.py'
2019-08-03T10:28:04,200   adding 'voila/tools/remove_dpsi_priors.py'
2019-08-03T10:28:04,201   adding 'voila/tools/tests.py'
2019-08-03T10:28:04,201   adding 'voila/tools/tool.py'
2019-08-03T10:28:04,201   adding 'voila/tools/unittests/__init__.py'
2019-08-03T10:28:04,201   adding 'voila/tools/unittests/test_ctrl_psi_dictionary.py'
2019-08-03T10:28:04,201   adding 'voila/tools/unittests/test_example_tool.py'
2019-08-03T10:28:04,202   adding 'voila/tools/unittests/test_find_files.py'
2019-08-03T10:28:04,202   adding 'voila/tools/unittests/test_find_voila_files.py'
2019-08-03T10:28:04,202   adding 'voila/tools/unittests/test_hello_caleb.py'
2019-08-03T10:28:04,202   adding 'voila/tools/unittests/test_junction_dictionary.py'
2019-08-03T10:28:04,202   adding 'voila/tools/unittests/test_util_print_hello.py'
2019-08-03T10:28:04,203   adding 'voila/tools/utils/__init__.py'
2019-08-03T10:28:04,203   adding 'voila/tools/utils/all_pairwise.py'
2019-08-03T10:28:04,203   adding 'voila/tools/utils/calebs_xrange.py'
2019-08-03T10:28:04,203   adding 'voila/tools/utils/compare_dpsis.py'
2019-08-03T10:28:04,204   adding 'voila/tools/utils/find_files.py'
2019-08-03T10:28:04,204   adding 'voila/tools/utils/index_all.py'
2019-08-03T10:28:04,206   adding 'voila/tools/utils/io_caleb.py'
2019-08-03T10:28:04,207   adding 'voila/tools/utils/merge_dicts.py'
2019-08-03T10:28:04,207   adding 'voila/tools/utils/most_common_elem.py'
2019-08-03T10:28:04,207   adding 'voila/tools/utils/percent_through_list.py'
2019-08-03T10:28:04,207   adding 'voila/tools/utils/print_hello.py'
2019-08-03T10:28:04,207   adding 'voila/tools/utils/random_merge_numpy.py'
2019-08-03T10:28:04,208   adding 'voila/tools/utils/string_to_bool.py'
2019-08-03T10:28:04,208   adding 'voila/utils/__init__.py'
2019-08-03T10:28:04,208   adding 'voila/utils/utils_voila.py'
2019-08-03T10:28:04,208   adding 'voila/view/__init__.py'
2019-08-03T10:28:04,209   adding 'voila/view/datatables.py'
2019-08-03T10:28:04,209   adding 'voila/view/deltapsi.py'
2019-08-03T10:28:04,209   adding 'voila/view/forms.py'
2019-08-03T10:28:04,210   adding 'voila/view/heterogen.py'
2019-08-03T10:28:04,210   adding 'voila/view/psi.py'
2019-08-03T10:28:04,210   adding 'voila/view/splicegraph.py'
2019-08-03T10:28:04,211   adding 'voila/view/views.py'
2019-08-03T10:28:04,211   adding 'voila/view/static/css/copy_lsv.css'
2019-08-03T10:28:04,211   adding 'voila/view/static/css/custom.css'
2019-08-03T10:28:04,211   adding 'voila/view/static/css/index.css'
2019-08-03T10:28:04,212   adding 'voila/view/static/css/lsv.css'
2019-08-03T10:28:04,212   adding 'voila/view/static/css/multi_input.css'
2019-08-03T10:28:04,212   adding 'voila/view/static/css/summary.css'
2019-08-03T10:28:04,213   adding 'voila/view/static/css/images/sort_asc.png'
2019-08-03T10:28:04,214   adding 'voila/view/static/css/images/sort_asc_disabled.png'
2019-08-03T10:28:04,214   adding 'voila/view/static/css/images/sort_both.png'
2019-08-03T10:28:04,214   adding 'voila/view/static/css/images/sort_desc.png'
2019-08-03T10:28:04,214   adding 'voila/view/static/css/images/sort_desc_disabled.png'
2019-08-03T10:28:04,215   adding 'voila/view/static/css/lib/jquery.dataTables.min.css'
2019-08-03T10:28:04,215   adding 'voila/view/static/css/lib/pure-min.css'
2019-08-03T10:28:04,215   adding 'voila/view/static/css/lib/sumoselect.min.css'
2019-08-03T10:28:04,216   adding 'voila/view/static/img/LogoOnly.svg'
2019-08-03T10:28:04,217   adding 'voila/view/static/img/LogoOnly_white.svg'
2019-08-03T10:28:04,271   adding 'voila/view/static/img/biociphers.png'
2019-08-03T10:28:04,276   adding 'voila/view/static/img/biociphers_header.png'
2019-08-03T10:28:04,277   adding 'voila/view/static/img/biociphers_wb.png'
2019-08-03T10:28:04,277   adding 'voila/view/static/img/download.svg'
2019-08-03T10:28:04,278   adding 'voila/view/static/img/favicon.ico'
2019-08-03T10:28:04,278   adding 'voila/view/static/img/hide.png'
2019-08-03T10:28:04,278   adding 'voila/view/static/img/left_arrow.svg'
2019-08-03T10:28:04,279   adding 'voila/view/static/img/penn.jpg'
2019-08-03T10:28:04,279   adding 'voila/view/static/img/remove.svg'
2019-08-03T10:28:04,279   adding 'voila/view/static/img/right_arrow.svg'
2019-08-03T10:28:04,279   adding 'voila/view/static/img/solve-icon16.png'
2019-08-03T10:28:04,280   adding 'voila/view/static/img/ucsc.png'
2019-08-03T10:28:04,280   adding 'voila/view/static/img/undo.png'
2019-08-03T10:28:04,280   adding 'voila/view/static/img/zoom_in.png'
2019-08-03T10:28:04,280   adding 'voila/view/static/img/zoom_out.png'
2019-08-03T10:28:04,281   adding 'voila/view/static/js/ajax.js'
2019-08-03T10:28:04,281   adding 'voila/view/static/js/colors.js'
2019-08-03T10:28:04,281   adding 'voila/view/static/js/copy_lsv.js'
2019-08-03T10:28:04,281   adding 'voila/view/static/js/heatmap.js'
2019-08-03T10:28:04,282   adding 'voila/view/static/js/lsv.js'
2019-08-03T10:28:04,283   adding 'voila/view/static/js/lsvtools.js'
2019-08-03T10:28:04,283   adding 'voila/view/static/js/splicegraphs.js'
2019-08-03T10:28:04,284   adding 'voila/view/static/js/splicegraphtools.js'
2019-08-03T10:28:04,284   adding 'voila/view/static/js/table.js'
2019-08-03T10:28:04,284   adding 'voila/view/static/js/utils.js'
2019-08-03T10:28:04,285   adding 'voila/view/static/js/violin.js'
2019-08-03T10:28:04,286   adding 'voila/view/static/js/lib/clipboard.min.js'
2019-08-03T10:28:04,286   adding 'voila/view/static/js/lib/d3-beeswarm.js'
2019-08-03T10:28:04,293   adding 'voila/view/static/js/lib/d3.v5.min.js'
2019-08-03T10:28:04,294   adding 'voila/view/static/js/lib/jquery.ba-throttle-debounce.min.js'
2019-08-03T10:28:04,296   adding 'voila/view/static/js/lib/jquery.dataTables.min.js'
2019-08-03T10:28:04,299   adding 'voila/view/static/js/lib/jquery.min.js'
2019-08-03T10:28:04,300   adding 'voila/view/static/js/lib/jquery.sumoselect.min.js'
2019-08-03T10:28:04,300   adding 'voila/view/templates/base.html'
2019-08-03T10:28:04,301   adding 'voila/view/templates/base_index.html'
2019-08-03T10:28:04,301   adding 'voila/view/templates/base_summary.html'
2019-08-03T10:28:04,301   adding 'voila/view/templates/dpsi_index.html'
2019-08-03T10:28:04,302   adding 'voila/view/templates/dpsi_summary.html'
2019-08-03T10:28:04,302   adding 'voila/view/templates/het_index.html'
2019-08-03T10:28:04,302   adding 'voila/view/templates/het_summary.html'
2019-08-03T10:28:04,303   adding 'voila/view/templates/psi_index.html'
2019-08-03T10:28:04,303   adding 'voila/view/templates/psi_summary.html'
2019-08-03T10:28:04,304   adding 'voila/view/templates/sg_summary.html'
2019-08-03T10:28:04,304   adding 'majiq-2.1.dist-info/METADATA'
2019-08-03T10:28:04,304   adding 'majiq-2.1.dist-info/WHEEL'
2019-08-03T10:28:04,304   adding 'majiq-2.1.dist-info/entry_points.txt'
2019-08-03T10:28:04,304   adding 'majiq-2.1.dist-info/top_level.txt'
2019-08-03T10:28:04,305   adding 'majiq-2.1.dist-info/RECORD'
2019-08-03T10:28:04,306   removing build/bdist.macosx-10.14-x86_64/wheel
2019-08-03T10:28:04,659   Created wheel for majiq: filename=majiq-2.1-cp37-none-any.whl size=6205103 sha256=30693413aab1a41be342eef1648a078c3372f3e9d66f14c5c23cd98442a5d9fc
2019-08-03T10:28:04,659   Stored in directory: /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-ephem-wheel-cache-sozvwegj/wheels/00/3d/76/940444754a408b8ff1833f6b3b5986d046f3d20992e2c6ca63
2019-08-03T10:28:04,660   Removing source in /private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-install-i56kguux/majiq
2019-08-03T10:28:04,817 Successfully built majiq
2019-08-03T10:28:04,856 Installing collected packages: majiq

2019-08-03T10:28:05,044 Successfully installed majiq-2.1
2019-08-03T10:28:05,044 Cleaning up...
2019-08-03T10:28:05,065 Removed build tracker '/private/var/folders/lr/mvr1g67s11d5_4_kfqvwhly40000gn/T/pip-req-tracker-32ph9ln0'