2015-10-23 18:39:22 Full thread dump Java HotSpot(TM) 64-Bit Server VM (23.0-b21 mixed mode): "Attach Listener" daemon prio=10 tid=0x00007f2ae0008000 nid=0x1126 waiting on condition [0x0000000000000000] java.lang.Thread.State: RUNNABLE "transaction-timeout executor" daemon prio=10 tid=0x00007f2aa8016800 nid=0x10a2 in Object.wait() [0x00007f2ae8375000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at org.mulgara.resolver.MulgaraTransactionFactory.acquireMutex(MulgaraTransactionFactory.java:283) - locked <0x000000054b04f308> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraTransactionFactory.acquireMutexWithInterrupt(MulgaraTransactionFactory.java:308) - locked <0x000000054b04f308> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraInternalTransaction.heuristicRollback(MulgaraInternalTransaction.java:400) - locked <0x000000054b04f308> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraTransactionFactory$XAReaper$1.run(MulgaraTransactionFactory.java:409) "transaction-timeout executor" daemon prio=10 tid=0x00007f2aa800c000 nid=0x1086 in Object.wait() [0x00007f2a83923000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at org.mulgara.resolver.MulgaraTransactionFactory.acquireMutex(MulgaraTransactionFactory.java:283) - locked <0x000000054a6b0da8> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraTransactionFactory.acquireMutexWithInterrupt(MulgaraTransactionFactory.java:308) - locked <0x000000054a6b0da8> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraInternalTransaction.heuristicRollback(MulgaraInternalTransaction.java:400) - locked <0x000000054a6b0da8> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraTransactionFactory$XAReaper$1.run(MulgaraTransactionFactory.java:409) "transaction-timeout executor" daemon prio=10 tid=0x00007f2aa800b800 nid=0x1063 in Object.wait() [0x00007f2a53fde000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at org.mulgara.resolver.MulgaraTransactionFactory.acquireMutex(MulgaraTransactionFactory.java:283) - locked <0x000000054ac951c0> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraTransactionFactory.acquireMutexWithInterrupt(MulgaraTransactionFactory.java:308) - locked <0x000000054ac951c0> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraInternalTransaction.heuristicRollback(MulgaraInternalTransaction.java:400) - locked <0x000000054ac951c0> (a org.mulgara.resolver.LocalJRDFDatabaseSession) at org.mulgara.resolver.MulgaraTransactionFactory$XAReaper$1.run(MulgaraTransactionFactory.java:409) "pool-8080-50" daemon prio=10 tid=0x00007f2ac03a5800 nid=0x66d3 waiting on condition [0x00007f2a535dc000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x0000000540036678> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:442) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-46" daemon prio=10 tid=0x00007f2abc001800 nid=0x6393 runnable [0x00007f2a6c6fb000] java.lang.Thread.State: RUNNABLE at ch.qos.logback.classic.Logger.callTurboFilters(Logger.java:795) at ch.qos.logback.classic.Logger.isDebugEnabled(Logger.java:513) at ch.qos.logback.classic.Logger.isDebugEnabled(Logger.java:509) at org.apache.log4j.Category.isDebugEnabled(Category.java:121) at org.mulgara.resolver.store.StatementStoreResolution.getColumnValue(StatementStoreResolution.java:439) at org.mulgara.store.tuples.Difference.getColumnValue(Difference.java:119) at org.mulgara.store.tuples.UnboundJoin.advance(UnboundJoin.java:586) at org.mulgara.store.tuples.UnboundJoin.next(UnboundJoin.java:451) at org.mulgara.store.tuples.UnorderedProjection.next(UnorderedProjection.java:299) at org.mulgara.store.xa.HybridTuples.populateArray(HybridTuples.java:605) at org.mulgara.store.xa.HybridTuples.primeBuffer(HybridTuples.java:592) at org.mulgara.store.xa.HybridTuples.materialiseTuples(HybridTuples.java:575) at org.mulgara.store.xa.HybridTuples.(HybridTuples.java:165) at org.mulgara.store.xa.HybridTuplesFactory.newTuples(HybridTuplesFactory.java:102) at org.mulgara.store.xa.HybridTuplesFactory.newTuples(HybridTuplesFactory.java:79) at org.mulgara.store.tuples.TuplesOperations.sort(TuplesOperations.java:902) at org.mulgara.store.tuples.TuplesOperations.removeDuplicates(TuplesOperations.java:1062) at org.mulgara.store.tuples.TuplesOperations.project(TuplesOperations.java:827) at org.mulgara.resolver.LocalQueryResolver.projectSelectClause(LocalQueryResolver.java:310) at org.mulgara.resolver.LocalQueryResolver.resolveE(LocalQueryResolver.java:276) at org.mulgara.resolver.DatabaseOperationContext.doQuery(DatabaseOperationContext.java:798) at org.mulgara.resolver.QueryOperation.execute(QueryOperation.java:136) at org.mulgara.resolver.MulgaraInternalTransaction.execute(MulgaraInternalTransaction.java:625) at org.mulgara.resolver.DatabaseSession.execute(DatabaseSession.java:751) at org.mulgara.resolver.DatabaseSession.query(DatabaseSession.java:464) at org.trippi.impl.mulgara.MulgaraSession.query(MulgaraSession.java:147) at org.trippi.impl.base.ConcurrentTriplestoreReader.findTuples(Unknown Source) at org.fcrepo.server.resourceIndex.ResourceIndexImpl.findTuples(ResourceIndexImpl.java:280) at org.fcrepo.server.resourceIndex.ResourceIndexModule.findTuples(ResourceIndexModule.java:312) at org.trippi.server.TrippiServer.find(Unknown Source) at org.trippi.server.http.TrippiServlet.doFind(Unknown Source) at org.trippi.server.http.TrippiServlet.doGet(Unknown Source) at org.fcrepo.server.access.RISearchServlet.doGet(RISearchServlet.java:101) at org.trippi.server.http.TrippiServlet.doGet(Unknown Source) at javax.servlet.http.HttpServlet.service(HttpServlet.java:617) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:368) at org.fcrepo.server.security.jaas.AuthFilterJAAS.doFilter(AuthFilterJAAS.java:330) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:380) at org.springframework.security.web.access.channel.ChannelProcessingFilter.doFilter(ChannelProcessingFilter.java:109) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:380) at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:169) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298) at org.apache.coyote.http11.Http11NioProcessor.process(Http11NioProcessor.java:886) at org.apache.coyote.http11.Http11NioProtocol$Http11ConnectionHandler.process(Http11NioProtocol.java:721) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:2256) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-45" daemon prio=10 tid=0x00007f2ac8015000 nid=0x6390 waiting on condition [0x00007f2a6abfa000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x0000000540036678> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:442) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-43" daemon prio=10 tid=0x00007f2ac011b800 nid=0x6360 waiting on condition [0x00007f2a6aefd000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x0000000540036678> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:442) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-40" daemon prio=10 tid=0x00007f2ac800b000 nid=0x6358 runnable [0x00007f2a83ffc000] java.lang.Thread.State: RUNNABLE at org.mulgara.store.statement.xa.TripleAVLFile$Phase$AbstractStoreTuples.next(TripleAVLFile.java:1938) at org.mulgara.resolver.store.StatementStoreResolution.next(StatementStoreResolution.java:434) at org.mulgara.store.tuples.Difference.next(Difference.java:244) at org.mulgara.store.tuples.UnboundJoin.advance(UnboundJoin.java:564) at org.mulgara.store.tuples.UnboundJoin.next(UnboundJoin.java:451) at org.mulgara.store.tuples.UnorderedProjection.next(UnorderedProjection.java:299) at org.mulgara.store.xa.HybridTuples.populateArray(HybridTuples.java:605) at org.mulgara.store.xa.HybridTuples.primeBuffer(HybridTuples.java:592) at org.mulgara.store.xa.HybridTuples.materialiseTuples(HybridTuples.java:575) at org.mulgara.store.xa.HybridTuples.(HybridTuples.java:165) at org.mulgara.store.xa.HybridTuplesFactory.newTuples(HybridTuplesFactory.java:102) at org.mulgara.store.xa.HybridTuplesFactory.newTuples(HybridTuplesFactory.java:79) at org.mulgara.store.tuples.TuplesOperations.sort(TuplesOperations.java:902) at org.mulgara.store.tuples.TuplesOperations.removeDuplicates(TuplesOperations.java:1062) at org.mulgara.store.tuples.TuplesOperations.project(TuplesOperations.java:827) at org.mulgara.resolver.LocalQueryResolver.projectSelectClause(LocalQueryResolver.java:310) at org.mulgara.resolver.LocalQueryResolver.resolveE(LocalQueryResolver.java:276) at org.mulgara.resolver.DatabaseOperationContext.doQuery(DatabaseOperationContext.java:798) at org.mulgara.resolver.QueryOperation.execute(QueryOperation.java:136) at org.mulgara.resolver.MulgaraInternalTransaction.execute(MulgaraInternalTransaction.java:625) at org.mulgara.resolver.DatabaseSession.execute(DatabaseSession.java:751) at org.mulgara.resolver.DatabaseSession.query(DatabaseSession.java:464) at org.trippi.impl.mulgara.MulgaraSession.query(MulgaraSession.java:147) at org.trippi.impl.base.ConcurrentTriplestoreReader.findTuples(Unknown Source) at org.fcrepo.server.resourceIndex.ResourceIndexImpl.findTuples(ResourceIndexImpl.java:280) at org.fcrepo.server.resourceIndex.ResourceIndexModule.findTuples(ResourceIndexModule.java:312) at org.trippi.server.TrippiServer.find(Unknown Source) at org.trippi.server.http.TrippiServlet.doFind(Unknown Source) at org.trippi.server.http.TrippiServlet.doGet(Unknown Source) at org.fcrepo.server.access.RISearchServlet.doGet(RISearchServlet.java:101) at org.trippi.server.http.TrippiServlet.doGet(Unknown Source) at javax.servlet.http.HttpServlet.service(HttpServlet.java:617) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:368) at org.fcrepo.server.security.jaas.AuthFilterJAAS.doFilter(AuthFilterJAAS.java:330) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:380) at org.springframework.security.web.access.channel.ChannelProcessingFilter.doFilter(ChannelProcessingFilter.java:109) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:380) at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:169) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298) at org.apache.coyote.http11.Http11NioProcessor.process(Http11NioProcessor.java:886) at org.apache.coyote.http11.Http11NioProtocol$Http11ConnectionHandler.process(Http11NioProtocol.java:721) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:2256) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-36" daemon prio=10 tid=0x00007f2ac015d000 nid=0x6266 runnable [0x00007f2a795fa000] java.lang.Thread.State: RUNNABLE at org.mulgara.store.xa.HybridTuples.sortHeap(HybridTuples.java:721) at org.mulgara.store.xa.HybridTuples.beforeFirst(HybridTuples.java:221) at org.mulgara.store.tuples.Difference.findMatch(Difference.java:298) at org.mulgara.store.tuples.Difference.next(Difference.java:250) at org.mulgara.store.tuples.UnboundJoin.advance(UnboundJoin.java:564) at org.mulgara.store.tuples.UnboundJoin.next(UnboundJoin.java:451) at org.mulgara.store.tuples.UnorderedProjection.next(UnorderedProjection.java:299) at org.mulgara.store.xa.HybridTuples.populateArray(HybridTuples.java:605) at org.mulgara.store.xa.HybridTuples.primeBuffer(HybridTuples.java:592) at org.mulgara.store.xa.HybridTuples.materialiseTuples(HybridTuples.java:575) at org.mulgara.store.xa.HybridTuples.(HybridTuples.java:165) at org.mulgara.store.xa.HybridTuplesFactory.newTuples(HybridTuplesFactory.java:102) at org.mulgara.store.xa.HybridTuplesFactory.newTuples(HybridTuplesFactory.java:79) at org.mulgara.store.tuples.TuplesOperations.sort(TuplesOperations.java:902) at org.mulgara.store.tuples.TuplesOperations.removeDuplicates(TuplesOperations.java:1062) at org.mulgara.store.tuples.TuplesOperations.project(TuplesOperations.java:827) at org.mulgara.resolver.LocalQueryResolver.projectSelectClause(LocalQueryResolver.java:310) at org.mulgara.resolver.LocalQueryResolver.resolveE(LocalQueryResolver.java:276) at org.mulgara.resolver.DatabaseOperationContext.doQuery(DatabaseOperationContext.java:798) at org.mulgara.resolver.QueryOperation.execute(QueryOperation.java:136) at org.mulgara.resolver.MulgaraInternalTransaction.execute(MulgaraInternalTransaction.java:625) at org.mulgara.resolver.DatabaseSession.execute(DatabaseSession.java:751) at org.mulgara.resolver.DatabaseSession.query(DatabaseSession.java:464) at org.trippi.impl.mulgara.MulgaraSession.query(MulgaraSession.java:147) at org.trippi.impl.base.ConcurrentTriplestoreReader.findTuples(Unknown Source) at org.fcrepo.server.resourceIndex.ResourceIndexImpl.findTuples(ResourceIndexImpl.java:280) at org.fcrepo.server.resourceIndex.ResourceIndexModule.findTuples(ResourceIndexModule.java:312) at org.trippi.server.TrippiServer.find(Unknown Source) at org.trippi.server.http.TrippiServlet.doFind(Unknown Source) at org.trippi.server.http.TrippiServlet.doGet(Unknown Source) at org.fcrepo.server.access.RISearchServlet.doGet(RISearchServlet.java:101) at org.trippi.server.http.TrippiServlet.doGet(Unknown Source) at javax.servlet.http.HttpServlet.service(HttpServlet.java:617) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:368) at org.fcrepo.server.security.jaas.AuthFilterJAAS.doFilter(AuthFilterJAAS.java:330) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:380) at org.springframework.security.web.access.channel.ChannelProcessingFilter.doFilter(ChannelProcessingFilter.java:109) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:380) at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:169) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298) at org.apache.coyote.http11.Http11NioProcessor.process(Http11NioProcessor.java:886) at org.apache.coyote.http11.Http11NioProtocol$Http11ConnectionHandler.process(Http11NioProtocol.java:721) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:2256) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-35" daemon prio=10 tid=0x00007f2ac054b800 nid=0x6264 waiting on condition [0x00007f2a793fa000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x0000000540036678> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:442) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-33" daemon prio=10 tid=0x00007f2ac0134000 nid=0x6261 waiting on condition [0x00007f2b1d980000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x0000000540036678> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:442) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-26" daemon prio=10 tid=0x00007f2ac03b5800 nid=0x60e4 waiting on condition [0x00007f2a59ef5000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x0000000540036678> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:442) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "pool-8080-20" daemon prio=10 tid=0x00007f2ab402c800 nid=0x5dcd runnable [0x00007f2a5a0f5000] java.lang.Thread.State: RUNNABLE at ch.qos.logback.classic.Logger.callTurboFilters(Logger.java:795) at ch.qos.logback.classic.Logger.isDebugEnabled(Logger.java:513) at ch.qos.logback.classic.Logger.isDebugEnabled(Logger.java:509) at org.apache.log4j.Category.isDebugEnabled(Category.java:121) at org.mulgara.resolver.store.StatementStoreResolution.getColumnValue(StatementStoreResolution.java:439) at org.mulgara.store.tuples.Difference.getColumnValue(Difference.java:119) at org.mulgara.store.tuples.UnboundJoin.advance(UnboundJoin.java:586) at org.mulgara.store.tuples.UnboundJoin.next(UnboundJoin.java:451) at org.mulgara.store.tuples.UnorderedProjection.next(UnorderedProjection.java:299) at org.mulgara.store.xa.HybridTuples.populateArray(HybridTuples.java:605) at org.mulgara.store.xa.HybridTuples.primeBuffer(HybridTuples.java:592) at org.mulgara.store.xa.HybridTuples.materialiseTuples(HybridTuples.java:575) at org.mulgara.store.xa.HybridTuples.(HybridTuples.java:165) at org.mulgara.store.xa.HybridTuplesFactory.newTuples(HybridTuplesFactory.java:102) at org.mulgara.store.xa.HybridTuplesFactory.newTuples(HybridTuplesFactory.java:79) at org.mulgara.store.tuples.TuplesOperations.sort(TuplesOperations.java:902) at org.mulgara.store.tuples.TuplesOperations.removeDuplicates(TuplesOperations.java:1062) at org.mulgara.store.tuples.TuplesOperations.project(TuplesOperations.java:827) at org.mulgara.resolver.LocalQueryResolver.projectSelectClause(LocalQueryResolver.java:310) at org.mulgara.resolver.LocalQueryResolver.resolveE(LocalQueryResolver.java:276) at org.mulgara.resolver.DatabaseOperationContext.doQuery(DatabaseOperationContext.java:798) at org.mulgara.resolver.QueryOperation.execute(QueryOperation.java:136) at org.mulgara.resolver.MulgaraInternalTransaction.execute(MulgaraInternalTransaction.java:625) at org.mulgara.resolver.DatabaseSession.execute(DatabaseSession.java:751) at org.mulgara.resolver.DatabaseSession.query(DatabaseSession.java:464) at org.trippi.impl.mulgara.MulgaraSession.query(MulgaraSession.java:147) at org.trippi.impl.base.ConcurrentTriplestoreReader.findTuples(Unknown Source) at org.fcrepo.server.resourceIndex.ResourceIndexImpl.findTuples(ResourceIndexImpl.java:280) at org.fcrepo.server.resourceIndex.ResourceIndexModule.findTuples(ResourceIndexModule.java:312) at org.trippi.server.TrippiServer.find(Unknown Source) at org.trippi.server.http.TrippiServlet.doFind(Unknown Source) at org.trippi.server.http.TrippiServlet.doGet(Unknown Source) at org.fcrepo.server.access.RISearchServlet.doGet(RISearchServlet.java:101) at org.trippi.server.http.TrippiServlet.doGet(Unknown Source) at javax.servlet.http.HttpServlet.service(HttpServlet.java:617) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:368) at org.fcrepo.server.security.jaas.AuthFilterJAAS.doFilter(AuthFilterJAAS.java:330) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:380) at org.springframework.security.web.access.channel.ChannelProcessingFilter.doFilter(ChannelProcessingFilter.java:109) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:380) at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:169) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298) at org.apache.coyote.http11.Http11NioProcessor.process(Http11NioProcessor.java:886) at org.apache.coyote.http11.Http11NioProtocol$Http11ConnectionHandler.process(Http11NioProtocol.java:721) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:2256) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "MultiThreadedHttpConnectionManager cleanup" daemon prio=10 tid=0x00007f2a98037000 nid=0x10be in Object.wait() [0x00007f2a6c2f9000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x00000005400365e0> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:135) - locked <0x00000005400365e0> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:151) at org.apache.commons.httpclient.MultiThreadedHttpConnectionManager$ReferenceQueueThread.run(MultiThreadedHttpConnectionManager.java:1122) "pool-4-thread-1" prio=10 tid=0x00007f2a9008f000 nid=0xf33 waiting on condition [0x00007f2a592e9000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x0000000540032478> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.ScheduledThreadPoolExecutor$DelayedWorkQueue.take(ScheduledThreadPoolExecutor.java:1079) at java.util.concurrent.ScheduledThreadPoolExecutor$DelayedWorkQueue.take(ScheduledThreadPoolExecutor.java:807) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "MultiThreadedHttpConnectionManager cleanup" daemon prio=10 tid=0x00007f2ac0471800 nid=0xf1f in Object.wait() [0x00007f2a59cf3000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x0000000541e74af8> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:135) - locked <0x0000000541e74af8> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:151) at org.apache.commons.httpclient.MultiThreadedHttpConnectionManager$ReferenceQueueThread.run(MultiThreadedHttpConnectionManager.java:1122) "TP-Monitor" daemon prio=10 tid=0x00007f2b28640000 nid=0xe0c in Object.wait() [0x00007f2a593ea000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at org.apache.tomcat.util.threads.ThreadPool$MonitorRunnable.run(ThreadPool.java:565) - locked <0x00000005402b3010> (a org.apache.tomcat.util.threads.ThreadPool$MonitorRunnable) at java.lang.Thread.run(Thread.java:722) "TP-Processor4" daemon prio=10 tid=0x00007f2b287fe800 nid=0xe0b runnable [0x00007f2a594eb000] java.lang.Thread.State: RUNNABLE at java.net.PlainSocketImpl.socketAccept(Native Method) at java.net.AbstractPlainSocketImpl.accept(AbstractPlainSocketImpl.java:398) at java.net.ServerSocket.implAccept(ServerSocket.java:522) at java.net.ServerSocket.accept(ServerSocket.java:490) at org.apache.jk.common.ChannelSocket.accept(ChannelSocket.java:312) at org.apache.jk.common.ChannelSocket.acceptConnections(ChannelSocket.java:666) at org.apache.jk.common.ChannelSocket$SocketAcceptor.runIt(ChannelSocket.java:877) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:690) at java.lang.Thread.run(Thread.java:722) "TP-Processor3" daemon prio=10 tid=0x00007f2b28448800 nid=0xe0a in Object.wait() [0x00007f2a595ec000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x00000005402b33a0> (a org.apache.tomcat.util.threads.ThreadPool$ControlRunnable) at java.lang.Object.wait(Object.java:503) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:662) - locked <0x00000005402b33a0> (a org.apache.tomcat.util.threads.ThreadPool$ControlRunnable) at java.lang.Thread.run(Thread.java:722) "TP-Processor2" daemon prio=10 tid=0x00007f2b2913e000 nid=0xe09 in Object.wait() [0x00007f2a596ed000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x00000005402b36a8> (a org.apache.tomcat.util.threads.ThreadPool$ControlRunnable) at java.lang.Object.wait(Object.java:503) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:662) - locked <0x00000005402b36a8> (a org.apache.tomcat.util.threads.ThreadPool$ControlRunnable) at java.lang.Thread.run(Thread.java:722) "TP-Processor1" daemon prio=10 tid=0x00007f2b28cd1000 nid=0xe08 in Object.wait() [0x00007f2a597ee000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x00000005402b39b0> (a org.apache.tomcat.util.threads.ThreadPool$ControlRunnable) at java.lang.Object.wait(Object.java:503) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:662) - locked <0x00000005402b39b0> (a org.apache.tomcat.util.threads.ThreadPool$ControlRunnable) at java.lang.Thread.run(Thread.java:722) "InactivityMonitor WriteCheck" daemon prio=10 tid=0x00007f2aac004000 nid=0xe07 in Object.wait() [0x00007f2a598ef000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.util.TimerThread.mainLoop(Timer.java:552) - locked <0x00000005406a8258> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "InactivityMonitor ReadCheck" daemon prio=10 tid=0x00007f2aac002000 nid=0xe06 in Object.wait() [0x00007f2a599f0000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.util.TimerThread.mainLoop(Timer.java:552) - locked <0x00000005408000c0> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "InactivityMonitor WriteCheck" daemon prio=10 tid=0x00007f2ae0003800 nid=0xe05 in Object.wait() [0x00007f2a59af1000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.util.TimerThread.mainLoop(Timer.java:552) - locked <0x0000000540db5220> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "InactivityMonitor ReadCheck" daemon prio=10 tid=0x00007f2ae0002000 nid=0xe04 in Object.wait() [0x00007f2a59bf2000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.util.TimerThread.mainLoop(Timer.java:552) - locked <0x0000000540db4de0> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "ActiveMQ Transport: tcp:///127.0.0.1:46860" daemon prio=10 tid=0x00007f2ad5451000 nid=0xe02 runnable [0x00007f2a59df4000] java.lang.Thread.State: RUNNABLE at java.net.SocketInputStream.socketRead0(Native Method) at java.net.SocketInputStream.read(SocketInputStream.java:150) at java.net.SocketInputStream.read(SocketInputStream.java:121) at org.apache.activemq.transport.tcp.TcpBufferedInputStream.fill(TcpBufferedInputStream.java:50) at org.apache.activemq.transport.tcp.TcpTransport$2.fill(TcpTransport.java:576) at org.apache.activemq.transport.tcp.TcpBufferedInputStream.read(TcpBufferedInputStream.java:58) at org.apache.activemq.transport.tcp.TcpTransport$2.read(TcpTransport.java:561) at java.io.DataInputStream.readInt(DataInputStream.java:387) at org.apache.activemq.openwire.OpenWireFormat.unmarshal(OpenWireFormat.java:269) at org.apache.activemq.transport.tcp.TcpTransport.readCommand(TcpTransport.java:227) at org.apache.activemq.transport.tcp.TcpTransport.doRun(TcpTransport.java:219) at org.apache.activemq.transport.tcp.TcpTransport.run(TcpTransport.java:202) at java.lang.Thread.run(Thread.java:722) "http-8080-Acceptor-0" daemon prio=10 tid=0x00007f2b28f1f800 nid=0xdfd runnable [0x00007f2a5a2f9000] java.lang.Thread.State: RUNNABLE at sun.nio.ch.ServerSocketChannelImpl.accept0(Native Method) at sun.nio.ch.ServerSocketChannelImpl.accept(ServerSocketChannelImpl.java:226) - locked <0x0000000540134b70> (a java.lang.Object) at org.apache.tomcat.util.net.NioEndpoint$Acceptor.run(NioEndpoint.java:1309) at java.lang.Thread.run(Thread.java:722) "http-8080-ClientPoller-3" daemon prio=10 tid=0x00007f2b28f38000 nid=0xdfc runnable [0x00007f2a5a3fa000] java.lang.Thread.State: RUNNABLE at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method) at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:228) at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:81) at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:87) - locked <0x0000000540135d48> (a sun.nio.ch.Util$2) - locked <0x0000000540135d38> (a java.util.Collections$UnmodifiableSet) - locked <0x0000000540135af0> (a sun.nio.ch.EPollSelectorImpl) at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:98) at org.apache.tomcat.util.net.NioEndpoint$Poller.run(NioEndpoint.java:1588) at java.lang.Thread.run(Thread.java:722) "http-8080-ClientPoller-2" daemon prio=10 tid=0x00007f2b2865b800 nid=0xdfb runnable [0x00007f2a5a4fb000] java.lang.Thread.State: RUNNABLE at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method) at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:228) at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:81) at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:87) - locked <0x00000005401352f8> (a sun.nio.ch.Util$2) - locked <0x00000005401352e8> (a java.util.Collections$UnmodifiableSet) - locked <0x00000005401350a0> (a sun.nio.ch.EPollSelectorImpl) at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:98) at org.apache.tomcat.util.net.NioEndpoint$Poller.run(NioEndpoint.java:1588) at java.lang.Thread.run(Thread.java:722) "http-8080-ClientPoller-1" daemon prio=10 tid=0x00007f2b28f39000 nid=0xdfa runnable [0x00007f2a5a5fc000] java.lang.Thread.State: RUNNABLE at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method) at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:228) at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:81) at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:87) - locked <0x0000000540135820> (a sun.nio.ch.Util$2) - locked <0x0000000540135810> (a java.util.Collections$UnmodifiableSet) - locked <0x00000005401355c8> (a sun.nio.ch.EPollSelectorImpl) at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:98) at org.apache.tomcat.util.net.NioEndpoint$Poller.run(NioEndpoint.java:1588) at java.lang.Thread.run(Thread.java:722) "http-8080-ClientPoller-0" daemon prio=10 tid=0x00007f2b284df800 nid=0xdf9 runnable [0x00007f2a5a6fd000] java.lang.Thread.State: RUNNABLE at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method) at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:228) at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:81) at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:87) - locked <0x00000005401071a8> (a sun.nio.ch.Util$2) - locked <0x0000000540107198> (a java.util.Collections$UnmodifiableSet) - locked <0x0000000540106f40> (a sun.nio.ch.EPollSelectorImpl) at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:98) at org.apache.tomcat.util.net.NioEndpoint$Poller.run(NioEndpoint.java:1588) at java.lang.Thread.run(Thread.java:722) "ContainerBackgroundProcessor[StandardEngine[Catalina]]" daemon prio=10 tid=0x00007f2b2863d800 nid=0xdf8 waiting on condition [0x00007f2ae812a000] java.lang.Thread.State: TIMED_WAITING (sleeping) at java.lang.Thread.sleep(Native Method) at org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.run(ContainerBase.java:1579) at java.lang.Thread.run(Thread.java:722) "ActiveMQ Transport: tcp://localhost/127.0.0.1:61616" prio=10 tid=0x00007f2a84105800 nid=0xdf7 runnable [0x00007f2b1c169000] java.lang.Thread.State: RUNNABLE at java.net.SocketInputStream.socketRead0(Native Method) at java.net.SocketInputStream.read(SocketInputStream.java:150) at java.net.SocketInputStream.read(SocketInputStream.java:121) at org.apache.activemq.transport.tcp.TcpBufferedInputStream.fill(TcpBufferedInputStream.java:50) at org.apache.activemq.transport.tcp.TcpTransport$2.fill(TcpTransport.java:576) at org.apache.activemq.transport.tcp.TcpBufferedInputStream.read(TcpBufferedInputStream.java:58) at org.apache.activemq.transport.tcp.TcpTransport$2.read(TcpTransport.java:561) at java.io.DataInputStream.readInt(DataInputStream.java:387) at org.apache.activemq.openwire.OpenWireFormat.unmarshal(OpenWireFormat.java:269) at org.apache.activemq.transport.tcp.TcpTransport.readCommand(TcpTransport.java:227) at org.apache.activemq.transport.tcp.TcpTransport.doRun(TcpTransport.java:219) at org.apache.activemq.transport.tcp.TcpTransport.run(TcpTransport.java:202) at java.lang.Thread.run(Thread.java:722) "ActiveMQConnection[ID:library.sbu.ac.ir-59696-1445420643093-0:1] Scheduler" daemon prio=10 tid=0x00007f2a840f9000 nid=0xdf6 in Object.wait() [0x00007f2b1cc74000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x00000005406c09e8> (a java.util.TaskQueue) at java.lang.Object.wait(Object.java:503) at java.util.TimerThread.mainLoop(Timer.java:526) - locked <0x00000005406c09e8> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "pool-3-thread-1" prio=10 tid=0x00007f2b28f3c800 nid=0xdf4 waiting on condition [0x00007f2b1cd75000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x00000005403d9c78> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:442) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "Thread-11" prio=10 tid=0x00007f2b28a99000 nid=0xdf3 waiting on condition [0x00007f2b1c26a000] java.lang.Thread.State: TIMED_WAITING (sleeping) at java.lang.Thread.sleep(Native Method) at org.trippi.impl.base.ConcurrentTriplestoreWriter.run(Unknown Source) at java.lang.Thread.run(Thread.java:722) "Thread-10" prio=10 tid=0x00007f2b2886d800 nid=0xdf2 waiting on condition [0x00007f2b1c36b000] java.lang.Thread.State: TIMED_WAITING (sleeping) at java.lang.Thread.sleep(Native Method) at org.trippi.impl.base.ConfigurableSessionPool.run(Unknown Source) "Write-lock Reaper" daemon prio=10 tid=0x00007f2b2816a800 nid=0xdf1 in Object.wait() [0x00007f2a5a7fe000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.util.TimerThread.mainLoop(Timer.java:552) - locked <0x0000000540cd6fc0> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "TripleWriteThread: /Fedora_HOME/data/resourceIndex/xaStatementStore/xa.g_3201" daemon prio=10 tid=0x00007f2b282b6800 nid=0xdf0 in Object.wait() [0x00007f2b1c46c000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:503) at org.mulgara.store.statement.xa.TripleWriteThread.run(TripleWriteThread.java:135) - locked <0x0000000540c4ebd0> (a org.mulgara.store.statement.xa.TripleWriteThread) "TripleWriteThread: /Fedora_HOME/data/resourceIndex/xaStatementStore/xa.g_3120" daemon prio=10 tid=0x00007f2b28abd800 nid=0xdef in Object.wait() [0x00007f2b1c56d000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:503) at org.mulgara.store.statement.xa.TripleWriteThread.run(TripleWriteThread.java:135) - locked <0x0000000540c837b0> (a org.mulgara.store.statement.xa.TripleWriteThread) "TripleWriteThread: /Fedora_HOME/data/resourceIndex/xaStatementStore/xa.g_3012" daemon prio=10 tid=0x00007f2b28abb800 nid=0xdee in Object.wait() [0x00007f2b1c66e000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:503) at org.mulgara.store.statement.xa.TripleWriteThread.run(TripleWriteThread.java:135) - locked <0x0000000540ca6698> (a org.mulgara.store.statement.xa.TripleWriteThread) "JotmClock" daemon prio=10 tid=0x00007f2b28c07000 nid=0xded waiting on condition [0x00007f2b1c76f000] java.lang.Thread.State: TIMED_WAITING (sleeping) at java.lang.Thread.sleep(Native Method) at org.objectweb.jotm.TimerManager.clock(TimerManager.java:169) at org.objectweb.jotm.Clock.run(TimerManager.java:65) "JotmBatch" daemon prio=10 tid=0x00007f2b28c1c800 nid=0xdec in Object.wait() [0x00007f2b1c870000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x0000000541516110> (a java.util.Vector) at java.lang.Object.wait(Object.java:503) at org.objectweb.jotm.TimerManager.batch(TimerManager.java:221) - locked <0x0000000541516110> (a java.util.Vector) at org.objectweb.jotm.Batch.run(TimerManager.java:87) "Thread-8" prio=10 tid=0x00007f2b28c08800 nid=0xdeb in Object.wait() [0x00007f2b1c971000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x0000000541564c70> (a com.sun.corba.se.impl.javax.rmi.CORBA.KeepAlive) at java.lang.Object.wait(Object.java:503) at com.sun.corba.se.impl.javax.rmi.CORBA.KeepAlive.run(Util.java:752) - locked <0x0000000541564c70> (a com.sun.corba.se.impl.javax.rmi.CORBA.KeepAlive) "ActiveMQConnection[ID:library.sbu.ac.ir-53648-1445420625660-2:1] Scheduler" daemon prio=10 tid=0x00007f2b28390800 nid=0xde3 in Object.wait() [0x00007f2b1cb73000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x0000000540909cb0> (a java.util.TaskQueue) at java.lang.Object.wait(Object.java:503) at java.util.TimerThread.mainLoop(Timer.java:526) - locked <0x0000000540909cb0> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "ActiveMQ Transport Server: tcp://localhost:61616" daemon prio=10 tid=0x00007f2b282c0800 nid=0xddf runnable [0x00007f2b1cf77000] java.lang.Thread.State: RUNNABLE at java.net.PlainSocketImpl.socketAccept(Native Method) at java.net.AbstractPlainSocketImpl.accept(AbstractPlainSocketImpl.java:398) at java.net.ServerSocket.implAccept(ServerSocket.java:522) at java.net.ServerSocket.accept(ServerSocket.java:490) at org.apache.activemq.transport.tcp.TcpTransportServer.run(TcpTransportServer.java:280) at java.lang.Thread.run(Thread.java:722) "ActiveMQ Transport Server Thread Handler: tcp://localhost:61616" daemon prio=10 tid=0x00007f2b282c5000 nid=0xdde waiting on condition [0x00007f2b1d078000] java.lang.Thread.State: TIMED_WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x00000005406ed098> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:226) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.awaitNanos(AbstractQueuedSynchronizer.java:2082) at java.util.concurrent.LinkedBlockingQueue.poll(LinkedBlockingQueue.java:467) at org.apache.activemq.transport.tcp.TcpTransportServer$1.run(TcpTransportServer.java:352) at java.lang.Thread.run(Thread.java:722) "ActiveMQ Broker[localhost] Scheduler" daemon prio=10 tid=0x00007f2b284bc000 nid=0xddd in Object.wait() [0x00007f2b1d179000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.util.TimerThread.mainLoop(Timer.java:552) - locked <0x00000005408016c8> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "ActiveMQ Data File Writer" daemon prio=10 tid=0x00007f2b28b11800 nid=0xddc in Object.wait() [0x00007f2b1d27a000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:503) at org.apache.kahadb.journal.DataFileAppender.processQueue(DataFileAppender.java:312) - locked <0x0000000540894ef0> (a org.apache.kahadb.journal.DataFileAppender$1) at org.apache.kahadb.journal.DataFileAppender$2.run(DataFileAppender.java:203) "ActiveMQ Journal Checkpoint Worker" daemon prio=10 tid=0x00007f2b29012000 nid=0xddb waiting on condition [0x00007f2b1d37b000] java.lang.Thread.State: TIMED_WAITING (sleeping) at java.lang.Thread.sleep(Native Method) at org.apache.activemq.store.kahadb.MessageDatabase$3.run(MessageDatabase.java:296) "KahaDB Scheduler" daemon prio=10 tid=0x00007f2b2900e000 nid=0xdda in Object.wait() [0x00007f2b1d47c000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.util.TimerThread.mainLoop(Timer.java:552) - locked <0x0000000540895770> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:505) "RMI RenewClean-[194.225.24.199:51429]" daemon prio=10 tid=0x00007f2ab0005000 nid=0xdd9 in Object.wait() [0x00007f2b1d57d000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x000000054196f728> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:135) - locked <0x000000054196f728> (a java.lang.ref.ReferenceQueue$Lock) at sun.rmi.transport.DGCClient$EndpointEntry$RenewCleanThread.run(DGCClient.java:535) at java.lang.Thread.run(Thread.java:722) "RMI Scheduler(0)" daemon prio=10 tid=0x00007f2ab4021000 nid=0xdd8 waiting on condition [0x00007f2b1d87f000] java.lang.Thread.State: WAITING (parking) at sun.misc.Unsafe.park(Native Method) - parking to wait for <0x0000000540c1cec0> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject) at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186) at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:2043) at java.util.concurrent.ScheduledThreadPoolExecutor$DelayedWorkQueue.take(ScheduledThreadPoolExecutor.java:1079) at java.util.concurrent.ScheduledThreadPoolExecutor$DelayedWorkQueue.take(ScheduledThreadPoolExecutor.java:807) at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1043) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1103) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:722) "RMI Reaper" prio=10 tid=0x00007f2ab4007000 nid=0xdd6 in Object.wait() [0x00007f2b1da81000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <0x0000000541970058> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:135) - locked <0x0000000541970058> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:151) at sun.rmi.transport.ObjectTable$Reaper.run(ObjectTable.java:351) at java.lang.Thread.run(Thread.java:722) "RMI TCP Accept-0" daemon prio=10 tid=0x00007f2ab4003800 nid=0xdd5 runnable [0x00007f2b1db82000] java.lang.Thread.State: RUNNABLE at java.net.PlainSocketImpl.socketAccept(Native Method) at java.net.AbstractPlainSocketImpl.accept(AbstractPlainSocketImpl.java:398) at java.net.ServerSocket.implAccept(ServerSocket.java:522) at java.net.ServerSocket.accept(ServerSocket.java:490) at sun.rmi.transport.tcp.TCPTransport$AcceptLoop.executeAcceptLoop(TCPTransport.java:387) at sun.rmi.transport.tcp.TCPTransport$AcceptLoop.run(TCPTransport.java:359) at java.lang.Thread.run(Thread.java:722) "RMI TCP Accept-1099" daemon prio=10 tid=0x00007f2b28fce000 nid=0xdd3 runnable [0x00007f2b1dd84000] java.lang.Thread.State: RUNNABLE at java.net.PlainSocketImpl.socketAccept(Native Method) at java.net.AbstractPlainSocketImpl.accept(AbstractPlainSocketImpl.java:398) at java.net.ServerSocket.implAccept(ServerSocket.java:522) at java.net.ServerSocket.accept(ServerSocket.java:490) at sun.rmi.transport.tcp.TCPTransport$AcceptLoop.executeAcceptLoop(TCPTransport.java:387) at sun.rmi.transport.tcp.TCPTransport$AcceptLoop.run(TCPTransport.java:359) at java.lang.Thread.run(Thread.java:722) "Thread-3" prio=10 tid=0x00007f2b28c9e000 nid=0xdd2 waiting on condition [0x00007f2b1de85000] java.lang.Thread.State: TIMED_WAITING (sleeping) at java.lang.Thread.sleep(Native Method) at org.fcrepo.server.storage.DOReaderCache.run(DOReaderCache.java:47) "NioBlockingSelector.BlockPoller-1" daemon prio=10 tid=0x00007f2b285c3000 nid=0xdcf runnable [0x00007f2b1e3ab000] java.lang.Thread.State: RUNNABLE at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method) at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:228) at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:81) at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:87) - locked <0x0000000540134768> (a sun.nio.ch.Util$2) - locked <0x0000000540134758> (a java.util.Collections$UnmodifiableSet) - locked <0x0000000540134540> (a sun.nio.ch.EPollSelectorImpl) at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:98) at org.apache.tomcat.util.net.NioBlockingSelector$BlockPoller.run(NioBlockingSelector.java:317) "GC Daemon" daemon prio=10 tid=0x00007f2b28593800 nid=0xdce in Object.wait() [0x00007f2b1e4ac000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at sun.misc.GC$Daemon.run(GC.java:117) - locked <0x00000005411c7f68> (a sun.misc.GC$LatencyLock) "Service Thread" daemon prio=10 tid=0x00007f2b280ef800 nid=0xdcc runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE "C2 CompilerThread1" daemon prio=10 tid=0x00007f2b280ed000 nid=0xdcb waiting on condition [0x0000000000000000] java.lang.Thread.State: RUNNABLE "C2 CompilerThread0" daemon prio=10 tid=0x00007f2b280ea000 nid=0xdca waiting on condition [0x0000000000000000] java.lang.Thread.State: RUNNABLE "Signal Dispatcher" daemon prio=10 tid=0x00007f2b280e8000 nid=0xdc9 runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE "Finalizer" daemon prio=10 tid=0x00007f2b2809c000 nid=0xdc8 in Object.wait() [0x00007f2b1f26d000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:135) - locked <0x0000000540098c58> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:151) at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:177) "Reference Handler" daemon prio=10 tid=0x00007f2b28099800 nid=0xdc7 in Object.wait() [0x00007f2b1f36e000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:503) at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:133) - locked <0x0000000540098648> (a java.lang.ref.Reference$Lock) "main" prio=10 tid=0x00007f2b28009800 nid=0xdc1 runnable [0x00007f2b30979000] java.lang.Thread.State: RUNNABLE at java.net.PlainSocketImpl.socketAccept(Native Method) at java.net.AbstractPlainSocketImpl.accept(AbstractPlainSocketImpl.java:398) at java.net.ServerSocket.implAccept(ServerSocket.java:522) at java.net.ServerSocket.accept(ServerSocket.java:490) at org.apache.catalina.core.StandardServer.await(StandardServer.java:389) at org.apache.catalina.startup.Catalina.await(Catalina.java:662) at org.apache.catalina.startup.Catalina.start(Catalina.java:614) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) "VM Thread" prio=10 tid=0x00007f2b28092000 nid=0xdc6 runnable "GC task thread#0 (ParallelGC)" prio=10 tid=0x00007f2b28017800 nid=0xdc2 runnable "GC task thread#1 (ParallelGC)" prio=10 tid=0x00007f2b28019000 nid=0xdc3 runnable "GC task thread#2 (ParallelGC)" prio=10 tid=0x00007f2b2801b000 nid=0xdc4 runnable "GC task thread#3 (ParallelGC)" prio=10 tid=0x00007f2b2801d000 nid=0xdc5 runnable "VM Periodic Task Thread" prio=10 tid=0x00007f2b280f2000 nid=0xdcd waiting on condition JNI global references: 325