IQ-TREE multicore version 2.2.2.3 COVID-edition for Linux 64-bit built Apr 7 2023 Developed by Bui Quang Minh, James Barbetti, Nguyen Lam Tung, Olga Chernomor, Heiko Schmidt, Dominik Schrempf, Michael Woodhams, Ly Trong Nhan. Host: wheeler269.alliance.unm.edu (SSE4.2, 47 GB RAM) Command: iqtree -s ../FASTA_Anc_tags_18 -p Anchored_tags_18_part_outg.best_scheme.nex -z Concatenate_tree_conc_part_ori.trees -zb 1000 -n 0 -wpl --prefix Influ_genes_A_tags Seed: 844544 (Using SPRNG - Scalable Parallel Random Number Generator) Time: Thu May 18 02:14:37 2023 Kernel: SSE2 - 1 threads (8 CPU cores detected) HINT: Use -nt option to specify number of threads because your CPU has 8 cores! HINT: -nt AUTO will automatically determine the best number of threads to use. Reading partition model file Anchored_tags_18_part_outg.best_scheme.nex ... Reading alignment file ../FASTA_Anc_tags_18 ... Fasta format detected Reading fasta file: done in 0.173948 secs using 96.22% CPU Alignment most likely contains DNA/RNA sequences Constructing alignment: done in 0.495584 secs using 45.91% CPU WARNING: 3013 sites contain only gaps or ambiguous characters. Alignment has 18 sequences with 361956 columns, 6778 distinct patterns 5087 parsimony-informative, 12531 singleton sites, 344338 constant sites Gap/Ambiguity Composition p-value Analyzing sequences: done in 0.000682952 secs using 96.93% CPU 1 Aglaeactis.cupripennis.MVZ-183221_HB056 1.41% passed 94.81% 2 Aglaiocercus.kingii.MVZ-183274_HB128 1.49% passed 84.54% 3 Clytolaema.rubricauda.FMNH-395405_HB803 1.57% passed 94.69% 4 Coeligena.violifer.MVZ-183228_HB127 1.34% passed 96.97% 5 Heliodoxa.aurescens.MSB-36686_HB813 1.82% passed 99.28% 6 Heliodoxa.branickii.LSU-B1996_HB212 1.47% passed 98.83% 7 Heliodoxa.gularis.LSU-B5428_HB220 1.46% passed 98.20% 8 Heliodoxa.imperatrix.LSU-B12088_HB247 1.52% passed 97.51% 9 Heliodoxa.jacula.LSU-B11940_HB153 1.42% passed 99.99% 10 Heliodoxa.leadbeateri.MSB-36134_HB812 1.45% passed 99.01% 11 Heliodoxa.rubinoides.LSU-B01651_HB134 1.26% passed 99.93% 12 Heliodoxa.schreibersii.LSU-2009_HB438 1.52% passed 99.42% 13 Heliodoxa.schreibersii.LSU-B05440_HB139 1.38% passed 96.55% 14 Heliodoxa.xanthogonys.LSU-7415_HB470 1.53% passed 99.20% 15 Hylonympha.macrocerca.HM-3_HB804 1.90% passed 98.64% 16 Ocreatus.underwoodii.LSU-B22594_HB161 1.43% passed 94.28% 17 Sternoclyta.cyanopectus.JM-69_HB806 1.49% passed 94.55% 18 Urochroa.bougueri.ZMUC-128083_HB815 1.83% passed 99.45% **** TOTAL 1.52% 0 sequences failed composition chi2 test (p-value<5%; df=3) Loading 239 partitions... Subset Type Seqs Sites Infor Invar Model Name 1 DNA 18 1412 31 1319 HKY+F+I Archilochus_colubris_L100 2 18 1342 11 1291 K2P+I Archilochus_colubris_L102 3 DNA 18 1683 28 1581 HKY+F+I Archilochus_colubris_L103 4 DNA 18 1732 64 1578 TPM3+R2 Archilochus_colubris_L104 5 DNA 18 1399 24 1323 HKY+F+I Archilochus_colubris_L105 6 DNA 18 1702 48 1573 TPM3+I Archilochus_colubris_L107 7 18 1682 31 1569 K2P+I Archilochus_colubris_L108 8 DNA 18 1163 21 1111 HKY+F+I Archilochus_colubris_L10 9 DNA 18 1343 23 1261 TN+F+I Archilochus_colubris_L110 10 DNA 18 1336 28 1227 HKY+F+I Archilochus_colubris_L111 11 DNA 18 1931 18 1847 HKY+F+I Archilochus_colubris_L113 12 DNA 18 733 4 704 HKY+F Archilochus_colubris_L115 13 DNA 18 1379 30 1253 HKY+F+I Archilochus_colubris_L116 14 DNA 18 987 11 908 HKY+F+G4 Archilochus_colubris_L118 15 DNA 18 1586 22 1501 HKY+F+I Archilochus_colubris_L119 16 DNA 18 1782 21 1710 HKY+F+I Archilochus_colubris_L11 17 18 1577 31 1484 K2P+I Archilochus_colubris_L120 18 DNA 18 1885 36 1722 HKY+F+G4 Archilochus_colubris_L121 19 DNA 18 1946 46 1839 HKY+F+I Archilochus_colubris_L122 20 18 1637 19 1561 K2P+R2 Archilochus_colubris_L125 21 DNA 18 1657 23 1551 HKY+F+I Archilochus_colubris_L126 22 DNA 18 1726 34 1621 HKY+F+R2 Archilochus_colubris_L127 23 DNA 18 1305 10 1274 HKY+F Archilochus_colubris_L128 24 18 1631 24 1546 K2P+I Archilochus_colubris_L129 25 DNA 18 1640 14 1566 HKY+F+I Archilochus_colubris_L12 26 18 1768 21 1707 K2P+I Archilochus_colubris_L130 27 DNA 18 1131 8 1095 HKY+F+I Archilochus_colubris_L131 28 DNA 18 1565 28 1473 HKY+F+I Archilochus_colubris_L133 29 DNA 18 1571 19 1491 HKY+F+I Archilochus_colubris_L134 30 18 1628 33 1523 K2P+I Archilochus_colubris_L135 31 DNA 18 1993 26 1902 TN+F+I Archilochus_colubris_L136 32 DNA 18 1533 22 1450 HKY+F+I Archilochus_colubris_L137 33 18 1155 18 1082 K2P+R2 Archilochus_colubris_L141 34 DNA 18 1728 18 1677 TN+F+I Archilochus_colubris_L142 35 DNA 18 1578 18 1505 HKY+F+I Archilochus_colubris_L143 36 DNA 18 1702 24 1612 HKY+F+I Archilochus_colubris_L145 37 DNA 18 1788 12 1720 HKY+F+I Archilochus_colubris_L146 38 DNA 18 1573 23 1497 HKY+F+I Archilochus_colubris_L147 39 18 1310 21 1236 K2P+I Archilochus_colubris_L148 40 DNA 18 1772 36 1628 TN+F+R2 Archilochus_colubris_L149 41 DNA 18 1711 24 1606 HKY+F+I Archilochus_colubris_L151 42 18 1437 3 1422 K2P+I Archilochus_colubris_L152 43 DNA 18 2067 21 1947 TPM3+I Archilochus_colubris_L153 44 DNA 18 1687 15 1626 TN+F+I Archilochus_colubris_L154 45 18 1667 23 1590 K2P+I Archilochus_colubris_L155 46 18 1513 24 1430 K2P+I Archilochus_colubris_L157 47 DNA 18 1787 16 1740 HKY+F+I Archilochus_colubris_L158 48 DNA 18 1280 20 1212 HKY+F+I Archilochus_colubris_L159 49 DNA 18 1958 29 1868 HKY+F+I Archilochus_colubris_L161 50 18 1520 19 1438 K2P+I Archilochus_colubris_L162 51 DNA 18 1074 8 1049 TIM+F+I Archilochus_colubris_L163 52 18 1477 13 1408 K2P+I Archilochus_colubris_L165 53 18 1783 13 1733 K2P+I Archilochus_colubris_L169 54 DNA 18 1775 24 1711 HKY+F+R2 Archilochus_colubris_L170 55 18 1980 23 1906 K2P+I Archilochus_colubris_L171 56 DNA 18 900 9 859 HKY+F+I Archilochus_colubris_L174 57 DNA 18 1693 15 1636 HKY+F+I Archilochus_colubris_L175 58 DNA 18 1904 26 1805 HKY+F+I Archilochus_colubris_L176 59 DNA 18 1719 21 1638 HKY+F+I Archilochus_colubris_L177 60 DNA 18 1710 35 1626 HKY+F+I Archilochus_colubris_L178 61 DNA 18 1657 33 1572 HKY+F+R2 Archilochus_colubris_L180 62 DNA 18 1976 30 1835 HKY+F+I Archilochus_colubris_L182 63 DNA 18 1350 30 1239 HKY+F+I Archilochus_colubris_L183 64 DNA 18 1666 38 1509 HKY+F+I Archilochus_colubris_L187 65 DNA 18 1535 27 1450 HKY+F+I Archilochus_colubris_L188 66 DNA 18 1880 21 1820 HKY+F+I Archilochus_colubris_L189 67 DNA 18 1660 20 1578 HKY+F+I Archilochus_colubris_L190 68 18 1328 26 1258 K2P+I Archilochus_colubris_L192 69 DNA 18 472 6 454 TNe+I Archilochus_colubris_L193 70 DNA 18 1769 14 1725 HKY+F+I Archilochus_colubris_L194 71 18 1720 26 1637 K2P+I Archilochus_colubris_L195 72 18 1688 15 1638 K3Pu+F+I Archilochus_colubris_L196 73 18 1248 28 1158 K2P+I Archilochus_colubris_L197 74 DNA 18 1577 22 1515 HKY+F+R2 Archilochus_colubris_L1 75 DNA 18 1684 13 1640 HKY+F+I Archilochus_colubris_L202 76 DNA 18 1910 11 1867 HKY+F+I Archilochus_colubris_L203 77 DNA 18 2028 17 1951 HKY+F+I Archilochus_colubris_L204 78 DNA 18 1657 19 1601 HKY+F+I Archilochus_colubris_L205 79 DNA 18 1525 24 1439 HKY+F+I Archilochus_colubris_L206 80 DNA 18 1307 21 1243 HKY+F+I Archilochus_colubris_L207 81 18 447 7 423 K2P+I Archilochus_colubris_L208 82 DNA 18 1072 18 1026 HKY+F+I Archilochus_colubris_L209 83 DNA 18 1350 10 1309 HKY+F+I Archilochus_colubris_L210 84 18 1656 22 1582 K3Pu+F+R2 Archilochus_colubris_L211 85 DNA 18 2315 34 2179 HKY+F+I Archilochus_colubris_L213 86 DNA 18 1628 2 1618 F81+F Archilochus_colubris_L214 87 DNA 18 1170 0 1162 F81+F Archilochus_colubris_L215 WARNING: No parsimony-informative sites in partition Archilochus_colubris_L215 88 DNA 18 1677 38 1558 TPM2u+F+I Archilochus_colubris_L216 89 DNA 18 921 9 890 HKY+F Archilochus_colubris_L217 90 18 724 9 707 K3Pu+F+I Archilochus_colubris_L219 91 DNA 18 888 22 830 TN+F+I Archilochus_colubris_L21 92 18 1771 10 1708 K2P+I Archilochus_colubris_L221 93 DNA 18 1538 22 1468 HKY+F+I Archilochus_colubris_L222 94 18 1237 28 1124 K3Pu+F+R2 Archilochus_colubris_L224 95 18 969 7 931 K2P+I Archilochus_colubris_L225 96 DNA 18 1809 11 1744 HKY+F+I Archilochus_colubris_L226 97 18 1832 31 1744 K2P+R2 Archilochus_colubris_L228 98 18 1594 22 1508 K2P+I Archilochus_colubris_L229 99 DNA 18 1706 16 1650 HKY+F+I Archilochus_colubris_L22 100 18 1661 29 1605 K2P+I Archilochus_colubris_L230 101 DNA 18 1495 20 1411 HKY+F+I Archilochus_colubris_L231 102 DNA 18 1741 26 1664 HKY+F+I Archilochus_colubris_L232 103 18 846 15 801 K3Pu+F+I Archilochus_colubris_L233 104 DNA 18 1684 25 1605 HKY+F+I Archilochus_colubris_L234 105 18 1695 14 1640 K2P+I Archilochus_colubris_L235 106 DNA 18 809 15 767 HKY+F+I Archilochus_colubris_L237 107 DNA 18 813 16 750 HKY+F+I Archilochus_colubris_L239 108 DNA 18 1466 10 1428 HKY+F+I Archilochus_colubris_L240 109 DNA 18 1737 24 1660 HKY+F+I Archilochus_colubris_L241 110 DNA 18 1400 17 1322 TN+F+I Archilochus_colubris_L242 111 DNA 18 939 22 874 HKY+F+I Archilochus_colubris_L243 112 DNA 18 1102 15 1066 HKY+F+I Archilochus_colubris_L244 113 DNA 18 1774 28 1697 HKY+F+R2 Archilochus_colubris_L245 114 DNA 18 1716 33 1651 HKY+F+R2 Archilochus_colubris_L246 115 DNA 18 1586 30 1471 HKY+F+I Archilochus_colubris_L247 116 DNA 18 1547 22 1461 TPM3+I Archilochus_colubris_L248 117 18 957 10 919 K2P+I Archilochus_colubris_L249 118 DNA 18 1644 46 1526 TN+F+R2 Archilochus_colubris_L24 119 DNA 18 1523 15 1451 HKY+F+I Archilochus_colubris_L250 120 DNA 18 1731 21 1651 HKY+F+R2 Archilochus_colubris_L251 121 DNA 18 1645 23 1568 HKY+F+I Archilochus_colubris_L252 122 DNA 18 1344 3 1313 HKY+F+I Archilochus_colubris_L253 123 18 1693 36 1594 K2P+I Archilochus_colubris_L255 124 DNA 18 1721 26 1621 HKY+F+R2 Archilochus_colubris_L256 125 DNA 18 1707 26 1637 TN+F+I Archilochus_colubris_L257 126 DNA 18 1867 42 1743 HKY+F+I Archilochus_colubris_L258 127 DNA 18 1582 0 1576 HKY+F Archilochus_colubris_L260 WARNING: No parsimony-informative sites in partition Archilochus_colubris_L260 128 18 1737 15 1690 K2P+I Archilochus_colubris_L261 129 DNA 18 1559 19 1479 TPM2+R2 Archilochus_colubris_L262 130 18 1793 17 1717 K2P+I Archilochus_colubris_L264 131 18 539 19 494 K2P+I Archilochus_colubris_L265 132 18 2180 34 2051 K2P+I Archilochus_colubris_L266 133 DNA 18 1378 33 1279 HKY+F+I Archilochus_colubris_L269 134 DNA 18 1518 24 1412 HKY+F+I Archilochus_colubris_L270 135 18 1617 9 1592 K2P+I Archilochus_colubris_L271 136 18 564 3 555 K2P+I Archilochus_colubris_L272 137 18 1177 18 1093 K2P+I Archilochus_colubris_L275 138 18 1684 24 1615 K2P+I Archilochus_colubris_L276 139 18 1141 15 1068 K3P+I Archilochus_colubris_L277 140 18 838 17 773 K2P+I Archilochus_colubris_L279 141 DNA 18 984 18 921 TPM2+I Archilochus_colubris_L27 142 DNA 18 1647 12 1567 HKY+F+I Archilochus_colubris_L281 143 DNA 18 1908 40 1773 HKY+F+I Archilochus_colubris_L282 144 DNA 18 1654 29 1576 HKY+F+I Archilochus_colubris_L288 145 DNA 18 1661 25 1584 HKY+F+I Archilochus_colubris_L289 146 DNA 18 1591 19 1510 TN+F+I Archilochus_colubris_L28 147 DNA 18 1701 27 1612 HKY+F+R2 Archilochus_colubris_L292 148 DNA 18 1740 12 1695 HKY+F+I Archilochus_colubris_L293 149 DNA 18 1459 22 1372 HKY+F+I Archilochus_colubris_L294 150 18 1728 13 1677 K2P+I Archilochus_colubris_L295 151 DNA 18 1676 10 1624 HKY+F+I Archilochus_colubris_L296 152 DNA 18 1535 19 1474 TN+F+I Archilochus_colubris_L297 153 DNA 18 1846 36 1751 HKY+F+I Archilochus_colubris_L298 154 DNA 18 1725 15 1680 HKY+F+R2 Archilochus_colubris_L2 155 18 722 12 683 K2P+R2 Archilochus_colubris_L301 156 DNA 18 861 13 820 TNe+I Archilochus_colubris_L302 157 DNA 18 1589 18 1543 HKY+F+R2 Archilochus_colubris_L303 158 DNA 18 752 3 722 HKY+F+I Archilochus_colubris_L305 159 DNA 18 1792 8 1764 HKY+F+R2 Archilochus_colubris_L306 160 DNA 18 1126 28 1042 HKY+F+I Archilochus_colubris_L307 161 DNA 18 1683 10 1646 HKY+F+I Archilochus_colubris_L30 162 18 1680 26 1604 K2P+I Archilochus_colubris_L310 163 18 1774 15 1700 K2P+I Archilochus_colubris_L311 164 DNA 18 1408 21 1338 HKY+F+I Archilochus_colubris_L312 165 DNA 18 1718 10 1683 HKY+F+I Archilochus_colubris_L314 166 DNA 18 1796 24 1723 HKY+F+I Archilochus_colubris_L316 167 18 1424 19 1349 K2P+I Archilochus_colubris_L317 168 18 1426 38 1308 K2P+I Archilochus_colubris_L318 169 DNA 18 1589 26 1469 HKY+F+G4 Archilochus_colubris_L319 170 DNA 18 1735 24 1645 HKY+F+I Archilochus_colubris_L31 171 DNA 18 1579 24 1502 HKY+F+I Archilochus_colubris_L320 172 DNA 18 1752 12 1711 TPM3u+F+I Archilochus_colubris_L321 173 DNA 18 1706 15 1656 HKY+F+I Archilochus_colubris_L322 174 DNA 18 1716 14 1657 HKY+F+I Archilochus_colubris_L325 175 DNA 18 1529 35 1440 HKY+F+I Archilochus_colubris_L327 176 DNA 18 1675 53 1528 HKY+F+I Archilochus_colubris_L328 177 DNA 18 1384 50 1233 TPM3u+F+I Archilochus_colubris_L32 178 DNA 18 1635 14 1582 HKY+F+I Archilochus_colubris_L330 179 DNA 18 1176 23 1099 HKY+F+I Archilochus_colubris_L331 180 DNA 18 1678 18 1605 TN+F+I Archilochus_colubris_L333 181 DNA 18 1167 33 1072 HKY+F+I Archilochus_colubris_L334 182 DNA 18 1682 34 1584 HKY+F+I Archilochus_colubris_L335 183 DNA 18 1431 7 1365 HKY+F+I Archilochus_colubris_L336 184 DNA 18 1619 15 1551 HKY+F+I Archilochus_colubris_L337 185 18 1920 32 1776 K2P+I Archilochus_colubris_L338 186 DNA 18 1299 24 1239 HKY+F+I Archilochus_colubris_L339 187 DNA 18 1657 19 1594 TNe+R2 Archilochus_colubris_L340 188 DNA 18 1694 20 1605 TPM2+I Archilochus_colubris_L341 189 DNA 18 1737 42 1646 HKY+F+R2 Archilochus_colubris_L342 190 DNA 18 1392 20 1330 HKY+F+I Archilochus_colubris_L343 191 DNA 18 960 3 955 F81+F Archilochus_colubris_L344 192 DNA 18 1577 41 1471 HKY+F+R2 Archilochus_colubris_L346 193 DNA 18 1668 7 1639 HKY+F+I Archilochus_colubris_L347 194 18 1607 32 1494 K2P+I Archilochus_colubris_L34 195 DNA 18 1718 14 1663 HKY+F+I Archilochus_colubris_L35 196 DNA 18 1337 15 1289 HKY+F Archilochus_colubris_L36 197 DNA 18 1618 41 1491 TVMe+I Archilochus_colubris_L37 198 DNA 18 1665 29 1573 HKY+F+I Archilochus_colubris_L38 199 18 1639 19 1580 K2P+I Archilochus_colubris_L39 200 DNA 18 1630 18 1567 TN+F+I Archilochus_colubris_L3 201 DNA 18 1663 16 1600 HKY+F+I Archilochus_colubris_L41 202 DNA 18 1522 19 1452 HKY+F+I Archilochus_colubris_L42 203 DNA 18 1655 23 1573 HKY+F+I Archilochus_colubris_L43 204 DNA 18 1636 19 1569 HKY+F+I Archilochus_colubris_L44 205 DNA 18 1570 13 1525 HKY+F+I Archilochus_colubris_L48 206 DNA 18 1349 11 1326 TPM3u+F+I Archilochus_colubris_L4 207 18 1562 35 1429 K2P+I Archilochus_colubris_L50 208 18 606 13 566 K2P+I Archilochus_colubris_L51 209 DNA 18 1660 23 1587 HKY+F+I Archilochus_colubris_L53 210 DNA 18 1501 4 1484 TIMe+I Archilochus_colubris_L54 211 DNA 18 829 9 789 HKY+F+I Archilochus_colubris_L57 212 DNA 18 1732 11 1680 HKY+F+I Archilochus_colubris_L58 213 DNA 18 1788 22 1722 HKY+F+I Archilochus_colubris_L59 214 DNA 18 1340 14 1273 HKY+F+I Archilochus_colubris_L61 215 DNA 18 1726 17 1650 HKY+F+I Archilochus_colubris_L62 216 DNA 18 1636 28 1533 TN+F+R2 Archilochus_colubris_L63 217 DNA 18 1700 6 1650 HKY+F Archilochus_colubris_L64 218 DNA 18 1618 33 1513 TPM2u+F+I Archilochus_colubris_L65 219 DNA 18 1707 41 1589 HKY+F+I Archilochus_colubris_L67 220 DNA 18 1411 28 1332 TN+F+I Archilochus_colubris_L72 221 DNA 18 1279 25 1194 HKY+F+I Archilochus_colubris_L73 222 DNA 18 992 35 892 HKY+F+I+R2 Archilochus_colubris_L74 223 DNA 18 1458 38 1339 HKY+F+I Archilochus_colubris_L76 224 DNA 18 1336 35 1217 TPM2u+F+I Archilochus_colubris_L77 225 DNA 18 1276 12 1219 HKY+F+I Archilochus_colubris_L78 226 18 1537 44 1420 K2P+I Archilochus_colubris_L79 227 18 1031 20 974 K2P+R2 Archilochus_colubris_L7 228 DNA 18 1209 16 1155 HKY+F+I Archilochus_colubris_L80 229 DNA 18 1494 31 1372 TN+F+R2 Archilochus_colubris_L81 230 DNA 18 1692 20 1623 HKY+F+I Archilochus_colubris_L82 231 DNA 18 1714 17 1623 TN+F+R2 Archilochus_colubris_L85 232 DNA 18 1795 12 1742 HKY+F+I Archilochus_colubris_L87 233 DNA 18 1666 17 1613 HKY+F+I Archilochus_colubris_L88 234 18 1414 24 1339 K2P+I Archilochus_colubris_L89 235 DNA 18 846 8 814 HKY+F+I Archilochus_colubris_L94 236 DNA 18 1393 11 1339 HKY+F+I Archilochus_colubris_L95 237 DNA 18 1765 20 1702 HKY+F+I Archilochus_colubris_L98 238 DNA 18 1679 20 1600 HKY+F+I Archilochus_colubris_L99 239 DNA 18 1668 7 1619 HKY+F Archilochus_colubris_L9 Degree of missing data: 0.000 Info: multi-threading strategy over partitions Create initial parsimony tree by phylogenetic likelihood library (PLL)... 0.037 seconds NOTE: 16 MB RAM (0 GB) is required! Estimate model parameters (epsilon = 0.010) Initial log-likelihood: -666590.839 Current log-likelihood at step 1: -655614.302 Current log-likelihood at step 2: -655202.272 Current log-likelihood at step 3: -654978.448 Current log-likelihood at step 4: -654843.856 Current log-likelihood at step 5: -654722.623 Current log-likelihood at step 6: -654607.860 Current log-likelihood at step 7: -654475.025 Current log-likelihood at step 8: -654333.248 Current log-likelihood at step 9: -654214.142 Current log-likelihood at step 10: -654094.412 Current log-likelihood at step 11: -653986.245 Current log-likelihood at step 12: -653880.181 Current log-likelihood at step 13: -653764.584 Current log-likelihood at step 14: -653662.844 Current log-likelihood at step 15: -653563.721 Current log-likelihood at step 16: -653467.465 Current log-likelihood at step 17: -653385.234 Current log-likelihood at step 18: -653312.957 Current log-likelihood at step 19: -653241.723 Current log-likelihood at step 20: -653179.637 Current log-likelihood at step 21: -653121.525 Current log-likelihood at step 22: -653058.859 Current log-likelihood at step 23: -653005.944 Current log-likelihood at step 24: -652951.070 Current log-likelihood at step 25: -652893.486 Current log-likelihood at step 26: -652847.097 Current log-likelihood at step 27: -652805.776 Current log-likelihood at step 28: -652761.399 Current log-likelihood at step 29: -652715.509 Current log-likelihood at step 30: -652669.602 Current log-likelihood at step 31: -652617.990 Current log-likelihood at step 32: -652570.850 Current log-likelihood at step 33: -652524.635 Current log-likelihood at step 34: -652476.603 Current log-likelihood at step 35: -652436.370 Current log-likelihood at step 36: -652385.689 Current log-likelihood at step 37: -652349.312 Current log-likelihood at step 38: -652312.472 Current log-likelihood at step 39: -652271.747 Current log-likelihood at step 40: -652230.100 Current log-likelihood at step 41: -652190.288 Current log-likelihood at step 42: -652151.311 Current log-likelihood at step 43: -652121.522 Current log-likelihood at step 44: -652088.897 Current log-likelihood at step 45: -652057.116 Current log-likelihood at step 46: -652030.987 Current log-likelihood at step 47: -652000.629 Current log-likelihood at step 48: -651974.232 Current log-likelihood at step 49: -651940.203 Current log-likelihood at step 50: -651905.475 Current log-likelihood at step 51: -651878.933 Current log-likelihood at step 52: -651845.497 Current log-likelihood at step 53: -651810.941 Current log-likelihood at step 54: -651782.638 Current log-likelihood at step 55: -651750.937 Current log-likelihood at step 56: -651726.854 Current log-likelihood at step 57: -651698.568 Current log-likelihood at step 58: -651667.430 Current log-likelihood at step 59: -651635.272 Current log-likelihood at step 60: -651608.071 Current log-likelihood at step 61: -651582.278 Current log-likelihood at step 62: -651556.300 Current log-likelihood at step 63: -651527.135 Current log-likelihood at step 64: -651502.007 Current log-likelihood at step 65: -651472.787 Current log-likelihood at step 66: -651440.596 Current log-likelihood at step 67: -651422.489 Current log-likelihood at step 68: -651403.390 Current log-likelihood at step 69: -651384.748 Current log-likelihood at step 70: -651370.210 Current log-likelihood at step 71: -651353.753 Current log-likelihood at step 72: -651338.715 Current log-likelihood at step 73: -651320.089 Current log-likelihood at step 74: -651302.969 Current log-likelihood at step 75: -651286.086 Current log-likelihood at step 76: -651273.158 Current log-likelihood at step 77: -651262.954 Current log-likelihood at step 78: -651256.727 Current log-likelihood at step 79: -651247.791 Current log-likelihood at step 80: -651235.921 Current log-likelihood at step 81: -651225.147 Current log-likelihood at step 82: -651220.217 Current log-likelihood at step 83: -651215.242 Current log-likelihood at step 84: -651210.265 Current log-likelihood at step 85: -651205.323 Current log-likelihood at step 86: -651200.421 Current log-likelihood at step 87: -651191.173 Current log-likelihood at step 88: -651186.720 Current log-likelihood at step 89: -651176.473 Current log-likelihood at step 90: -651165.344 Current log-likelihood at step 91: -651158.533 Current log-likelihood at step 92: -651154.783 Current log-likelihood at step 93: -651150.987 Current log-likelihood at step 94: -651147.145 Current log-likelihood at step 95: -651143.258 Current log-likelihood at step 96: -651136.859 Current log-likelihood at step 97: -651130.113 Current log-likelihood at step 98: -651126.262 Current log-likelihood at step 99: -651119.034 Partition-specific rates: 1.392 0.756 1.145 2.528 1.341 1.734 1.389 0.938 1.161 1.572 0.850 0.820 1.830 1.538 1.004 0.689 1.197 1.568 1.267 1.084 1.265 1.456 0.381 1.085 0.781 0.691 0.558 1.148 0.934 1.178 0.910 1.127 1.551 0.615 0.918 1.012 0.671 0.995 1.183 1.717 1.208 0.208 1.053 0.811 0.983 1.108 0.474 0.953 0.804 1.084 0.540 0.871 0.497 1.208 0.775 0.880 0.663 1.052 0.907 1.062 1.207 1.248 1.669 1.884 0.971 0.576 0.853 1.014 0.882 0.525 1.039 0.573 1.541 1.021 0.488 0.414 0.747 0.600 1.168 1.141 1.023 0.954 0.892 1.048 1.038 0.106 0.138 1.434 0.567 0.598 1.505 0.628 0.938 1.949 0.837 0.643 1.142 1.069 0.644 0.619 1.076 0.837 1.379 0.879 0.677 1.328 1.505 0.599 0.956 1.106 1.328 0.801 1.061 1.219 1.375 0.980 0.849 1.739 0.816 1.128 0.968 0.416 1.296 1.295 0.850 1.386 0.059 0.469 1.142 0.725 1.548 1.058 1.470 1.326 0.312 0.346 1.352 0.904 1.332 1.603 1.410 0.875 1.426 1.061 0.817 1.036 1.355 0.499 1.076 0.535 0.589 0.829 1.165 0.609 1.287 1.034 0.740 0.747 0.381 1.583 0.374 0.896 0.775 0.978 0.407 0.893 1.036 1.540 1.351 0.913 0.953 0.464 0.563 0.676 0.999 1.709 1.958 0.609 1.294 0.780 1.829 1.264 0.818 0.820 1.434 1.003 0.837 0.931 1.538 0.906 0.079 1.578 0.304 1.394 0.660 0.578 1.738 1.264 0.733 0.752 0.893 0.964 0.953 0.826 0.505 1.486 1.749 1.507 0.944 0.223 0.940 0.591 0.712 0.887 0.810 1.493 0.479 1.287 1.320 1.245 1.263 2.345 1.721 2.003 0.841 1.489 1.367 0.970 1.916 0.784 1.089 0.555 0.610 1.118 0.774 0.746 0.744 0.891 0.461 Parameters optimization took 99 rounds (69.027 sec) WARNING: Estimated model parameters are at boundary that can cause numerical instability! Wrote distance file to... Partition information was printed to Influ_genes_A_tags.best_model.nex BEST SCORE FOUND : -651119.034 Partition log-likelihoods printed to Influ_genes_A_tags.partlh Total tree length: 0.066 Total number of iterations: 0 CPU time used for tree search: 0.000 sec (0h:0m:0s) Wall-clock time used for tree search: 0.000 sec (0h:0m:0s) Total CPU time used: 65.680 sec (0h:1m:5s) Total wall-clock time used: 69.195 sec (0h:1m:9s) ERROR: STACK TRACE FOR DEBUGGING: ERROR: 1 funcAbort() ERROR: 2 () ERROR: 3 gsignal() ERROR: 4 abort() ERROR: 5 () ERROR: 6 () ERROR: 7 runTreeReconstruction(Params&, IQTree*&) ERROR: 8 runPhyloAnalysis(Params&, Checkpoint*, IQTree*&, Alignment*&) ERROR: 9 runPhyloAnalysis(Params&, Checkpoint*) ERROR: 10 main() ERROR: 11 __libc_start_main() ERROR: 12 () ERROR: ERROR: *** IQ-TREE CRASHES WITH SIGNAL ABORTED ERROR: *** For bug report please send to developers: ERROR: *** Log file: Influ_genes_A_tags.log ERROR: *** Alignment files (if possible)