sample rSW rSCC1 rSCC2 rSCC3 rSAC1 rSAC2 rSAC3 rSDC1 rSDC2 rSDC3 Obs. 166 92 215 202 185 144 143 154 133 245 PD_whole_tree 9.32126 4.59126 8.46929 8.97073 9.56371 7.71978 7.46046 6.32686 7.55925 10.90204 chao1 197.7142857 113.5652174 241.5588235 233.3181818 260.9333333 189 176.1153846 193.516129 231.4285714 280.775 shannon 4.923658183 3.471307735 4.831441787 3.712014371 3.685864426 3.838716931 4.004485405 4.243705601 3.591722961 4.888909743 simpson 0.926836209 0.847502616 0.925403612 0.859027962 0.831203734 0.859324786 0.879146964 0.914310943 0.837174915 0.925125961