--
Nathan McCorkle
Rochester Institute of Technology
College of Science, Biotechnology/Bioinformatics
Meredith was asking about that and making a melaminometer
with it. Meredith?
JG
PS She mentioned http://uwspace.uwaterloo.ca/bitstream/10012/844/1/j2grenie2006.pdf
Design of a MOSFET-Based Pulsed Power
Supply for Electroporation
by
Jason R. Grenier
A thesis
presented to the University of Waterloo
in fulfillment of the
thesis requirement for the degree of
Master of Applied Science
in
Electrical and Computer Engineering
Waterloo, Ontario, Canada, 2006
©Jason
as a starting point.
The parallel and series MOSFET-based pulsed power supplies are capable of
producing controllable square pulses with widths of a few hundred nanoseconds to dc and amplitudes
up to 1500 V and 3000 V, respectively. The load in this study is a 1-mm electroporation cuvette filled
with a buffer solution that is varied in conductivity from 0.7 mS/m to 1000 mS/m. The results
indicate that by controlling the circuit parameters such as the number of parallel MOSFETs, gate
resistance, energy storage capacitance, and the parameters of the MOSFET driver gating pulses, the
output pulse parameters can be made almost independent of the load conductivity.
Sounds like you get a DC HV supply, a bank of capacitance equal to holding the volts
and storing energy, and let it rip. Instead of transistors, quick and dirty wold imply
an insulated wire dangling and touched to make a loud cracking spark. Repeat while necessary.
8 uF was used in the Jason Grenier machine of 2006.
Warning: Keep fingers out of spark path -- your skin is no barrier at all to such Voltage.
JG
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A setup with parallel plate conductors would get most of the "bugs"
between exposed to the same zap strength.
Copper conductors may get reacted into the saline solution
and be toxic CuCl2 to your bugs.
Some ni-chrome heater wire or stainless steel welding wire
flattened on an anvil might make good less reactive electrodes.
Or search around for some thin sheet stainless steel...and tin snips...
Use a plastic rod to do the switching -- duct tape the spark wire onto it.
Don't allow any arm to arm possibility of conduction or any distractions.
To ensure that, duct tape the spark wire onto it
and don't pick up the plastic rod until after changing any settings on anything,
and lay it down before touching anything else after doing the zap contacting.
Shouldn't need a super thrill seeker mentality with those precautions.
JG
The transformation (CaCl2) failed for the Monday class I don't TA (
and with a different prof teaching the lab too), and this was a good
experiment to try and ensure we'll have transformed cell lines to use
next week!
I would have tried the piezo sparkers, but they were packed in boxes
due to a recent lab move. Another time for sure!
My procedure was simple:
~1.5mL mid-log phase MM294 E.coli (filled microfuge tube with cultured
broth), spin for 10 minutes at 2700-G
decant supernatant and resuspend in sterile water (I used NanoPure, 18
Mohm or so)
spin again for 10 mins at 2700-G, resuspend in 0.5ml sterile water
add 5-10uL ligation reaction (I can't remember now)
transfer solution to electroporation cuvette (if you need it)
electroporate (Bio-Rad genepulser, first transferred the to a 2mm path
electroporation cuvette)
as fast as possible get them some recovery broth (I used SOC and its
preferred, LB prob works with lower efficiency, though not sure) (in
my case lid got stuck and it took prob 20 - 30 seconds from shocking
them to getting them )
place in incubator for 45-60 minutes (can be shaking up to 50 RPM)
plate on selective media gel
Somebody should wiki this or something!
Back when we were talking about DIY electroporation, I found an old
article similar to what you described. From what I remember, there
were 2 metal blocks and a layer of the cell solutions was placed in
between. I don't know the exact setup but I may be able to find it. If
you can wait until the 18th, I may be able to scan and send you the
article from the library. I'll look for the citation but IIRC, it was
not online
its got the low down on everything with graphs.... parallel plates are
already made in one-time use cuvette form, about $3 a piece... and
they can probably be reused with alcohol or/and HCL soaking for
sterilisation
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What volts and pulse width?
Nice write ups for your lab students.
JG
http://nathanmccorkle.com/projects/biorad1.JPG
http://nathanmccorkle.com/projects/biorad2.JPG
2.5kV (I used a 2mm path), 2.5msec time constant (not sure what this
means exactly)
>
> Nice write ups for your lab students.
>
> JG
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Yes pGLO is amp resistant, not sure what you mean by satellite colonies
Ahh, to be clear there were only two colonies on 12 non-control plates, and those two were at edge so they might just be contamination. I doubt it has anything to do with satellite colonies
Seems that one of the two colonies has pGLO! So overall the protocol works, but I'll do some more tuning to increase the efficacy
Pic added to the Picassa link I posted earlier
Brilliant! I brought this up on the NPR Weekend Edition interview I just got back from, so I'm especially glad it worked ;) (You and Cathal and the mailing list all got shout-outs.)
--mlp
I did that control, I must've forgot to mention
I'm gonna repeat again in next few days
Mice!!?? Where?
Looks like this is it
http://www.sciencedirect.com/science/article/pii/S0378517301006081
Electroporation of the skin to deliver antigen by using a piezo ceramic gas igniter
Pramod Upadhyay ,
National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi 110067, India
Received 26 October 2000. Revised 5 January 2001. Accepted 27 January 2001. Available online 30
March 2001.
International Journal of Pharmaceutics
Volume 217, Issues 1–2, 17 April 2001, Pages 249–253
Meredith, will that NPR weekend edition be audio or print? Can you post when we can listen where we can read?
Audio, this Saturday. I'll post a link to the recording when I know the address :)
--mlp