[#|2015-07-05T13:23:30.674-0700|SEVERE|glassfish3.1.2|edu.harvard.iq.dvn.core.index.IndexServiceBean|_ThreadID=32;_ThreadName=Thread-2;|org.apache.lucene.index.IndexNotFoundException: no segments* file found in org.apache.lucene.store.MMapDirectory@/data01/glassfish3/glassfish/domains/domain1/config/index-dir lockFactory=org.apache.lucene.store.NativeFSLockFactory@75bbe06b: files: [.nfs000000000043915300005bfe, .nfs000000000022812a00005c05, .nfs000000000022813300005c03, write.lock, .nfs000000000043915500005c01, .nfs000000000043915200005bfa, .nfs000000000022813400005bfb, .nfs000000000022812400005bfc, .nfs000000000043915400005c02, .nfs000000000022812900005c04, .nfs000000000022812500005bf9, .nfs000000000043915600005c06, .nfs000000000022812300005bfd, .nfs000000000043914600005bff, .nfs000000000022812800005c00] at org.apache.lucene.index.SegmentInfos$FindSegmentsFile.run(SegmentInfos.java:712) at org.apache.lucene.index.SegmentInfos$FindSegmentsFile.run(SegmentInfos.java:593) at org.apache.lucene.index.SegmentInfos.read(SegmentInfos.java:359) at org.apache.lucene.index.IndexWriter.(IndexWriter.java:1148) at org.apache.lucene.index.IndexWriter.(IndexWriter.java:936) at edu.harvard.iq.dvn.core.index.Indexer.addDocument(Indexer.java:571) at edu.harvard.iq.dvn.core.index.IndexServiceBean.addDocument(IndexServiceBean.java:315) at edu.harvard.iq.dvn.core.index.IndexServiceBean.indexBatch(IndexServiceBean.java:1078) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1052) at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1124) at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:5388) at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:619) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:800) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:571) at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:42) at sun.reflect.GeneratedMethodAccessor93.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:861) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:800) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:571) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doAround(SystemInterceptorProxy.java:162) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:144) at sun.reflect.GeneratedMethodAccessor91.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:861) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:800) at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:370) at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:5360) at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:5348) at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:214) at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:89) at $Proxy300.indexBatch(Unknown Source) at edu.harvard.iq.dvn.core.web.admin.OptionsPage.indexBatch_action(OptionsPage.java:3498) at edu.harvard.iq.dvn.core.web.admin.OptionsPage$Proxy$_$$_WeldClientProxy.indexBatch_action(OptionsPage$Proxy$_$$_WeldClientProxy.java) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at com.sun.el.parser.AstValue.invoke(AstValue.java:254) at com.sun.el.MethodExpressionImpl.invoke(MethodExpressionImpl.java:302) at org.jboss.weld.util.el.ForwardingMethodExpression.invoke(ForwardingMethodExpression.java:39) at org.jboss.weld.el.WeldMethodExpression.invoke(WeldMethodExpression.java:50) at com.sun.faces.facelets.el.TagMethodExpression.invoke(TagMethodExpression.java:105) at javax.faces.component.MethodBindingMethodExpressionAdapter.invoke(MethodBindingMethodExpressionAdapter.java:88) at com.sun.faces.application.ActionListenerImpl.processAction(ActionListenerImpl.java:102) at edu.harvard.iq.dvn.core.web.util.VDCActionListener.processAction(VDCActionListener.java:48) at javax.faces.component.UICommand.broadcast(UICommand.java:315) at com.icesoft.faces.component.panelseries.UISeries$RowEvent.broadcast(UISeries.java:622) at com.icesoft.faces.component.panelseries.UISeries.broadcast(UISeries.java:284) at com.icesoft.faces.component.paneltabset.PanelTabSet.broadcast(PanelTabSet.java:287) at com.icesoft.faces.component.panelseries.UISeries$RowEvent.broadcast(UISeries.java:622) at com.icesoft.faces.component.panelseries.UISeries.broadcast(UISeries.java:284) at com.icesoft.faces.component.paneltabset.PanelTabSet.broadcast(PanelTabSet.java:287) at javax.faces.component.UIViewRoot.broadcastEvents(UIViewRoot.java:794) at javax.faces.component.UIViewRoot.processApplication(UIViewRoot.java:1259) at com.sun.faces.lifecycle.InvokeApplicationPhase.execute(InvokeApplicationPhase.java:81) at com.sun.faces.lifecycle.Phase.doPhase(Phase.java:101) at com.sun.faces.lifecycle.LifecycleImpl.execute(LifecycleImpl.java:118) at javax.faces.webapp.FacesServlet.service(FacesServlet.java:593) at org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1550) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:343) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:217) at edu.harvard.iq.dvn.core.web.servlet.TermsOfUseFilter.doFilter(TermsOfUseFilter.java:186) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:217) at edu.harvard.iq.dvn.core.web.servlet.LoginFilter.doFilter(LoginFilter.java:262) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:217) at com.ocpsoft.pretty.PrettyFilter.doFilter(PrettyFilter.java:115) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:217) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:279) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:175) at org.apache.catalina.core.StandardPipeline.doInvoke(StandardPipeline.java:655) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:595) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:161) at org.apache.catalina.core.StandardPipeline.doInvoke(StandardPipeline.java:655) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:595) at org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:328) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:231) at com.sun.enterprise.v3.services.impl.ContainerMapper$AdapterCallable.call(ContainerMapper.java:317) at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:195) at com.sun.grizzly.http.ProcessorTask.invokeAdapter(ProcessorTask.java:860) at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:757) at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1056) at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:229) at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:137) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:104) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:90) at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:79) at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:54) at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:59) at com.sun.grizzly.ContextTask.run(ContextTask.java:71) at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:532) at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:513) at java.lang.Thread.run(Thread.java:662) |#]