$ Cytoscape_v3.5.1/Cytoscape debug
OpenCL was not initialized because it crashed on the previous attempt.
If you think it works now, remove disable-opencl.dummy manually from Cytoscape's configuration directory.
For more information on how to troubleshoot OpenCL, please refer to http://manual.cytoscape.org/en/stable/Cytoscape_and_OpenCL_GPU.html.
SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
SLF4J: Defaulting to no-operation (NOP) logger implementation
SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details.
javax.ws.rs.ProcessingException: Failed to start Grizzly HTTP server: Address already in use
	at org.glassfish.jersey.grizzly2.httpserver.GrizzlyHttpServerFactory.createHttpServer(GrizzlyHttpServerFactory.java:299)
	at org.glassfish.jersey.grizzly2.httpserver.GrizzlyHttpServerFactory.createHttpServer(GrizzlyHttpServerFactory.java:119)
	at org.cytoscape.rest.internal.task.GrizzlyServerManager.startServer(GrizzlyServerManager.java:91)
	at org.cytoscape.rest.internal.CyActivator.lambda$start$0(CyActivator.java:101)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
	at java.util.concurrent.FutureTask.run(FutureTask.java:266)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
	at java.lang.Thread.run(Thread.java:745)
Caused by: java.net.BindException: Address already in use
	at sun.nio.ch.Net.bind0(Native Method)
	at sun.nio.ch.Net.bind(Net.java:433)
	at sun.nio.ch.Net.bind(Net.java:425)
	at sun.nio.ch.ServerSocketChannelImpl.bind(ServerSocketChannelImpl.java:223)
	at sun.nio.ch.ServerSocketAdaptor.bind(ServerSocketAdaptor.java:74)
	at org.glassfish.grizzly.nio.transport.TCPNIOBindingHandler.bindToChannelAndAddress(TCPNIOBindingHandler.java:131)
	at org.glassfish.grizzly.nio.transport.TCPNIOBindingHandler.bind(TCPNIOBindingHandler.java:88)
	at org.glassfish.grizzly.nio.transport.TCPNIOTransport.bind(TCPNIOTransport.java:248)
	at org.glassfish.grizzly.nio.transport.TCPNIOTransport.bind(TCPNIOTransport.java:228)
	at org.glassfish.grizzly.nio.transport.TCPNIOTransport.bind(TCPNIOTransport.java:219)
	at org.glassfish.grizzly.http.server.NetworkListener.start(NetworkListener.java:714)
	at org.glassfish.grizzly.http.server.HttpServer.start(HttpServer.java:278)
	at org.glassfish.jersey.grizzly2.httpserver.GrizzlyHttpServerFactory.createHttpServer(GrizzlyHttpServerFactory.java:296)
	... 8 more
INFO  net.sf.jnati.deploy.artefact.ConfigManager - Loading global configuration
DEBUG net.sf.jnati.deploy.artefact.ConfigManager - Loading defaults: bundle://118.0:7/META-INF/jnati/jnati.default-properties
TRACE net.sf.jnati.config.ResolvingProperties - GET user.home = /home/aidan
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.dir = /home/aidan/.jnati
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.settingsFile = /home/aidan/.jnati/jnati.properties
INFO  net.sf.jnati.deploy.artefact.ConfigManager - Loading artefact configuration: jniinchi-1.03_1
DEBUG net.sf.jnati.deploy.artefact.ConfigManager - Loading instance defaults: bundle://118.0:7/META-INF/jnati/jnati.instance.default-properties
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.settingsFile.${jnati.artefactId} > jnati.settingsFile.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.settingsFile.${jnati.artefactId} = jnati.settingsFile.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.settingsFile.${jnati.artefactId}.${jnati.artefactVersion} > jnati.settingsFile.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.settingsFile.jniinchi.${jnati.artefactVersion} > jnati.settingsFile.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.settingsFile.${jnati.artefactId}.${jnati.artefactVersion} = jnati.settingsFile.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.repositoryUrls.${jnati.artefactId} > jnati.repositoryUrls.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.repositoryUrls.${jnati.artefactId} = jnati.repositoryUrls.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.repositoryUrls.${jnati.artefactId}.${jnati.artefactVersion} > jnati.repositoryUrls.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.repositoryUrls.jniinchi.${jnati.artefactVersion} > jnati.repositoryUrls.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.repositoryUrls.${jnati.artefactId}.${jnati.artefactVersion} = jnati.repositoryUrls.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.enableMultideploy.${jnati.artefactId} > jnati.enableMultideploy.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.enableMultideploy.${jnati.artefactId} = jnati.enableMultideploy.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.enableMultideploy.${jnati.artefactId}.${jnati.artefactVersion} > jnati.enableMultideploy.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.enableMultideploy.jniinchi.${jnati.artefactVersion} > jnati.enableMultideploy.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.enableMultideploy.${jnati.artefactId}.${jnati.artefactVersion} = jnati.enableMultideploy.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.maxMultideployCount.${jnati.artefactId} > jnati.maxMultideployCount.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.maxMultideployCount.${jnati.artefactId} = jnati.maxMultideployCount.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.maxMultideployCount.${jnati.artefactId}.${jnati.artefactVersion} > jnati.maxMultideployCount.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.maxMultideployCount.jniinchi.${jnati.artefactVersion} > jnati.maxMultideployCount.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.maxMultideployCount.${jnati.artefactId}.${jnati.artefactVersion} = jnati.maxMultideployCount.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.settingsFile.${jnati.artefactId} > jnati.settingsFile.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.settingsFile.${jnati.artefactId} = jnati.settingsFile.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.settingsFile.${jnati.artefactId} > jnati.settingsFile.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.settingsFile.${jnati.artefactId} = jnati.settingsFile.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.settingsFile.${jnati.artefactId} > jnati.settingsFile.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.settingsFile.${jnati.artefactId} = jnati.settingsFile.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - GET user.home = /home/aidan
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.dir = /home/aidan/.jnati
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.artefactId = jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.settingsFile.${jnati.artefactId} = /home/aidan/.jnati/jniinchi.properties
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId} = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = LINUX-AMD64
INFO  net.sf.jnati.deploy.repository.ClasspathRepository - Searching classpath for: jniinchi-1.03_1-LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId} = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = LINUX-AMD64
TRACE net.sf.jnati.deploy.repository.ClasspathRepository - Manifest location: bundle://118.0:25/META-INF/jniinchi/1.03_1/LINUX-AMD64/MANIFEST.xml
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId} = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.allowDirectLoad = true
TRACE net.sf.jnati.config.ResolvingProperties - GET user.home = /home/aidan
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.dir = /home/aidan/.jnati
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.localRepository = /home/aidan/.jnati/repo
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId} = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = LINUX-AMD64
INFO  net.sf.jnati.deploy.repository.LocalRepository - Searching local repository for: jniinchi-1.03_1-LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId} = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = LINUX-AMD64
DEBUG net.sf.jnati.deploy.repository.LocalRepository - Artefact path: /home/aidan/.jnati/repo/jniinchi/1.03_1/LINUX-AMD64
INFO  net.sf.jnati.deploy.artefact.ManifestReader - Reading manifest
TRACE net.sf.jnati.deploy.artefact.ManifestReader - File: libJniInchi-1.03_1-LINUX-AMD64.so
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} > jnati.osarch.jniinchi.${jnati.artefactVersion}
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.jniinchi.${jnati.artefactVersion} > jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = jnati.osarch.jniinchi.1.03_1
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - jnati.osarch.${jnati.artefactId} > jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - KEY jnati.osarch.${jnati.artefactId} = jnati.osarch.jniinchi
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId} = LINUX-AMD64
TRACE net.sf.jnati.config.ResolvingProperties - GET jnati.osarch.${jnati.artefactId}.${jnati.artefactVersion} = LINUX-AMD64
INFO  net.sf.jnati.deploy.NativeArtefactLocator - Artefact (jniinchi-1.03_1-LINUX-AMD64) location: /home/aidan/.jnati/repo/jniinchi/1.03_1/LINUX-AMD64
DEBUG net.sf.jnati.deploy.NativeLibraryLoader - Loading library: /home/aidan/.jnati/repo/jniinchi/1.03_1/LINUX-AMD64/libJniInchi-1.03_1-LINUX-AMD64.so
pool-20-thread-731 WARN [edu.ucsf.rbvi.chemViz2.internal.model.Compound] - Structure generation failed: EOF []
java.awt.image.RasterFormatException: Transformed width (0) is less than or equal to 0.
	at java.awt.image.AffineTransformOp.createCompatibleDestImage(AffineTransformOp.java:448)
	at java.awt.image.AffineTransformOp.filter(AffineTransformOp.java:227)
	at edu.ucsf.rbvi.chemViz2.internal.view.ViewUtils.createImage(ViewUtils.java:80)
	at edu.ucsf.rbvi.chemViz2.internal.model.Compound.getImage(Compound.java:223)
	at edu.ucsf.rbvi.chemViz2.internal.ui.CompoundPopup.addImages(CompoundPopup.java:174)
	at edu.ucsf.rbvi.chemViz2.internal.ui.CompoundPopup.<init>(CompoundPopup.java:101)
	at edu.ucsf.rbvi.chemViz2.internal.tasks.CompoundPopupTask.run(CompoundPopupTask.java:142)
	at org.cytoscape.work.internal.task.JDialogTaskManager$TaskRunnable.innerRun(JDialogTaskManager.java:326)
	at org.cytoscape.work.internal.task.JDialogTaskManager$TaskRunnable.run(JDialogTaskManager.java:355)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
	at java.util.concurrent.FutureTask.run(FutureTask.java:266)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
	at java.lang.Thread.run(Thread.java:745)
java.awt.image.RasterFormatException: Transformed width (0) is less than or equal to 0.
	at java.awt.image.AffineTransformOp.createCompatibleDestImage(AffineTransformOp.java:448)
	at java.awt.image.AffineTransformOp.filter(AffineTransformOp.java:227)
	at edu.ucsf.rbvi.chemViz2.internal.view.ViewUtils.createImage(ViewUtils.java:80)
	at edu.ucsf.rbvi.chemViz2.internal.model.Compound.getImage(Compound.java:223)
	at edu.ucsf.rbvi.chemViz2.internal.ui.CompoundPopup.addImages(CompoundPopup.java:174)
	at edu.ucsf.rbvi.chemViz2.internal.ui.CompoundPopup.<init>(CompoundPopup.java:101)
	at edu.ucsf.rbvi.chemViz2.internal.tasks.CompoundPopupTask.run(CompoundPopupTask.java:142)
	at org.cytoscape.work.internal.task.JDialogTaskManager$TaskRunnable.innerRun(JDialogTaskManager.java:326)
	at org.cytoscape.work.internal.task.JDialogTaskManager$TaskRunnable.run(JDialogTaskManager.java:355)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
	at java.util.concurrent.FutureTask.run(FutureTask.java:266)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
	at java.lang.Thread.run(Thread.java:745)