Node: anatomical_pipeline.parcellation_stage.parcThal
Working directory: /output_dir/nipype/sub-01/anatomical_pipeline/parcellation_stage/parcThal

Node inputs:

T1w_image = /output_dir/nipype/sub-01/anatomical_pipeline/parcellation_stage/Lausanne2018_parcellation/T1.nii.gz
bids_dir = <undefined>
session = <undefined>
subject = <undefined>
subject_id = sub-01
subjects_dir = /output_dir/freesurfer
template_image = /opt/conda/envs/py27msbparc/lib/python2.7/site-packages/cmtklib/data/segmentation/thalamus2018/mni_icbm152_t1_tal_nlin_sym_09b_hires_1.nii.gz
thalamic_nuclei_maps = /opt/conda/envs/py27msbparc/lib/python2.7/site-packages/cmtklib/data/segmentation/thalamus2018/Thalamus_Nuclei-HCP-4DSPAMs.nii.gz

Traceback (most recent call last):
  File "/opt/conda/envs/py27msbparc/lib/python2.7/site-packages/nipype/pipeline/plugins/linear.py", line 48, in run
    node.run(updatehash=updatehash)
  File "/opt/conda/envs/py27msbparc/lib/python2.7/site-packages/nipype/pipeline/engine/nodes.py", line 473, in run
    result = self._run_interface(execute=True)
  File "/opt/conda/envs/py27msbparc/lib/python2.7/site-packages/nipype/pipeline/engine/nodes.py", line 557, in _run_interface
    return self._run_command(execute)
  File "/opt/conda/envs/py27msbparc/lib/python2.7/site-packages/nipype/pipeline/engine/nodes.py", line 637, in _run_command
    result = self._interface.run(cwd=outdir)
  File "/opt/conda/envs/py27msbparc/lib/python2.7/site-packages/nipype/interfaces/base/core.py", line 369, in run
    runtime = self._run_interface(runtime)
  File "/opt/conda/envs/py27msbparc/lib/python2.7/site-packages/cmtklib/parcellation.py", line 1383, in _run_interface
    Ij = ni.load(jacobian_file).get_data()	# numpy.ndarray
  File "/opt/conda/envs/py27msbparc/lib/python2.7/site-packages/nibabel/loadsave.py", line 42, in load
    raise FileNotFoundError("No such file or no access: '%s'" % filename)
FileNotFoundError: No such file or no access: '/output_dir/nipype/sub-01/anatomical_pipeline/parcellation_stage/parcThal/T1_class-thalamus_probtissue_jacobian.nii.gz'