Groups

cBioPortal for Cancer Genomics Discussion Group

1–30 of 5388

This mailing list is for questions that are related to cbioportal.org. In order to filter out spams, every message is moderated. If you don't see your message posted immediately, it will be moderated and posted later.

0 selected

elias, Benjamin Gross2

8:59 AM

Order of Columns in Mutation, Copy-Number and Structural Variant Tables

Hi Elias, Unfortunately, as you have seen, we do have properties for various column behaviors, but

unread,

Order of Columns in Mutation, Copy-Number and Structural Variant Tables

Hi Elias, Unfortunately, as you have seen, we do have properties for various column behaviors, but

8:59 AM

Oliver Stolpe, … elias4

8:41 AM

cBioPortal v6.4.1 and SAML

Hi Oliver, I have also enountered this problem a view Months ago and also updated the cBioPortal Docs

unread,

cBioPortal v6.4.1 and SAML

Hi Oliver, I have also enountered this problem a view Months ago and also updated the cBioPortal Docs

8:41 AM

8:41 AM

Inquiry About cBioPortal Support Services

Dear cBioPortal Team, I hope this message finds you well. A friend recently mentioned that they

unread,

Inquiry About cBioPortal Support Services

Dear cBioPortal Team, I hope this message finds you well. A friend recently mentioned that they

8:41 AM

Miu ki Yip, Prasanna Jagannathan3

May 19

cBioPortal Datahub Public Dataset Load Into Database Issues

Hi Miu I have raised your concerns to the datahub team. Someone from the datahub team will get back

unread,

cBioPortal Datahub Public Dataset Load Into Database Issues

Hi Miu I have raised your concerns to the datahub team. Someone from the datahub team will get back

May 19

fairs...@oerc.ox.ac.uk, de Bruijn, Ino2

May 15

[FAIRsharing] Birthday of your FAIRsharing record

Thanks for reaching out! I sent an ownership request. Will review the record Best wishes, Ino From:

unread,

[FAIRsharing] Birthday of your FAIRsharing record

Thanks for reaching out! I sent an ownership request. Will review the record Best wishes, Ino From:

May 15

HUNT, Johanna (BIRMINGHAM WOMEN'S AND CHILDREN'S NHS FOUNDATION TRUST), … Benjamin Gross5

May 15

Trouble accessing AACR Project Genie

Hi Johanna, I do not see an entry for you in the AACR Project GENIE registration form. If you did

unread,

Trouble accessing AACR Project Genie

Hi Johanna, I do not see an entry for you in the AACR Project GENIE registration form. If you did

May 15

Brihn, Lesil, Tali Mazor2

May 15

cBioPortal VAF histograms

Hi Lesil, Thank you for the kind words. The VAF histogram is still available, but it has been moved

unread,

cBioPortal VAF histograms

Hi Lesil, Thank you for the kind words. The VAF histogram is still available, but it has been moved

May 15

Alexandre Fittipaldi, Benjamin Gross2

May 15

Request to use cBioPortal API for open non-commercial research platform

Hi Alex, Thank you for your email and your interest in connecting the cBioPortal API to your MedC82

unread,

Request to use cBioPortal API for open non-commercial research platform

Hi Alex, Thank you for your email and your interest in connecting the cBioPortal API to your MedC82

May 15

Rebecca Sansale, Aaron L3

May 13

error when loading study

hi aaron-- sorry, ive been in contact with ino and gaofei on slack. I am the maintainer of this

unread,

error when loading study

hi aaron-- sorry, ive been in contact with ino and gaofei on slack. I am the maintainer of this

May 13

Turski, Michelle, … Aedin.Culhane13

May 13

Request for VPAT for cBioPortal

https://pandoc.org/. will convert file types including markdown to almost anything else From:

unread,

Request for VPAT for cBioPortal

https://pandoc.org/. will convert file types including markdown to almost anything else From:

May 13

James.Salter, JJ Gao2

May 12

Image Licencing Request (590958)

Hi, You are free to use figures from cBioPortal in your educational material, there is no copyright

unread,

Image Licencing Request (590958)

Hi, You are free to use figures from cBioPortal in your educational material, there is no copyright

May 12

Alyona Ivanova, Jessica Singh5

May 8

Uploading public data

Hi Jessica, Just following up on my previous message. Could you please provide some guidance on how

unread,

Uploading public data

Hi Jessica, Just following up on my previous message. Could you please provide some guidance on how

May 8

Chua Eng Wee, Ramya Madupuri2

May 6

Inquiry - Mitochondrial DNA datasets

Hi Eng Wee, Thank you for reaching out. This isn't a glitch, mitochondrial DNA-encoded genes (

unread,

Inquiry - Mitochondrial DNA datasets

Hi Eng Wee, Thank you for reaching out. This isn't a glitch, mitochondrial DNA-encoded genes (

May 6

Balaji Krishnamachary, Guizela Huelsz Prince2

May 6

accession details or cohort identifiers

Hi Balaji, Within cBioPortal, cohorts or studies can be uniquely identified by the study ID, which

unread,

accession details or cohort identifiers

Hi Balaji, Within cBioPortal, cohorts or studies can be uniquely identified by the study ID, which

May 6

Kyle Beauchamp, Anu Vijay3

Apr 30

Missing Receptor Status in Breast Dataset

Awesome, thank you! On Thu, Apr 30, 2026 at 9:57 AM Anu Vijay <anuvi...@gmail.com> wrote: Hi

unread,

Missing Receptor Status in Breast Dataset

Awesome, thank you! On Thu, Apr 30, 2026 at 9:57 AM Anu Vijay <anuvi...@gmail.com> wrote: Hi

Apr 30

Qierra Brockman, Anu Vijay2

Apr 30

Matched_Norm_Sample_Barcode all NA

Hi Qierra, Thanks for reaching out! The matched normal status can be pulled from the SOMATIC_STATUS

unread,

Matched_Norm_Sample_Barcode all NA

Hi Qierra, Thanks for reaching out! The matched normal status can be pulled from the SOMATIC_STATUS

Apr 30

Mestrallet, Guillaume, … dssa...@niser.ac.in9

Apr 23

Thank you both! Best, Guillaume -----Original Message----- From: dssa...@niser.ac.in <dssachin@

unread,

Thank you both! Best, Guillaume -----Original Message----- From: dssa...@niser.ac.in <dssachin@

Apr 23

Álvaro Fernández, Tim Kuijpers2

Apr 21

Issue with Data Link

Dear Alvaro, I believe your link is not working since it looks like the URL contains the same sub-url

unread,

Issue with Data Link

Dear Alvaro, I believe your link is not working since it looks like the URL contains the same sub-url

Apr 21

Mantri Pradeep, Jessica Singh2

Apr 20

Interest in contributing to cBioPortal | Request for Slack Invite

Hi Pradeep, Great to see your interest in contributing! I see you've already joined the Slack

unread,

Interest in contributing to cBioPortal | Request for Slack Invite

Hi Pradeep, Great to see your interest in contributing! I see you've already joined the Slack

Apr 20

Md. Ashraful Hasan, Jessica Singh2

Apr 20

Unable to Retrieve ATRX Mutation Genomic Alteration Figure for LGG

Hi Md. Ashraful, Thanks for your message. Just to clarify, in the link you shared, ATRX mutation

unread,

Unable to Retrieve ATRX Mutation Genomic Alteration Figure for LGG

Hi Md. Ashraful, Thanks for your message. Just to clarify, in the link you shared, ATRX mutation

Apr 20

丸山宏二, Jessica Singh2

Apr 20

Dear Maruyama, Thank you for your question. The dataset is formally referred to as the TCGA Pan-

unread,

Dear Maruyama, Thank you for your question. The dataset is formally referred to as the TCGA Pan-

Apr 20

Elizabeth Battley, ole...@thehyve.nl3

Apr 16

Re: Error Message

Hi Elizabeth, Can you try them again? When I access the links I don't get any error: https://www.

unread,

Re: Error Message

Hi Elizabeth, Can you try them again? When I access the links I don't get any error: https://www.

Apr 16

Lorena Magraner, … Acebedo, Alyssa8

Apr 16

AACR Project GENIE

Thank you very much Alyssa, I will have a look at the information. Preliminary view it looks really

unread,

AACR Project GENIE

Thank you very much Alyssa, I will have a look at the information. Preliminary view it looks really

Apr 16

Maria Eduarda Gomes Oliveira, … Aaron L3

Apr 16

cBioPortal user reported error

Hi Maria, THanks for this report. I tried this link and it loaded for me. Can you try again? Did you

unread,

cBioPortal user reported error

Hi Maria, THanks for this report. I tried this link and it loaded for me. Can you try again? Did you

Apr 16

Miller, Lance D, ole...@thehyve.nl2

Apr 16

Explore Selected Studies: Freq = NA

Hi Lance, Which studies are selecting when going to "Explore Selected Studies"? Best

unread,

Explore Selected Studies: Freq = NA

Hi Lance, Which studies are selecting when going to "Explore Selected Studies"? Best

Apr 16

Luis Fernando Iglesias Martinez, … Ino de Bruijn4

Apr 16

Content in files are Git LFS pointers

It was an error on our side that we fixed. Thanks for reporting! El jue, 16 de abr de 2026, 9:52 am,

unread,

Content in files are Git LFS pointers

It was an error on our side that we fixed. Thanks for reporting! El jue, 16 de abr de 2026, 9:52 am,

Apr 16

Pritam Kumar Ghosh, … Tali Mazor5

Apr 13

BCGA is not working properly

Hi Pritam, This email address is for support of cbioportal.org. It seems the issue you are describing

unread,

BCGA is not working properly

Hi Pritam, This email address is for support of cbioportal.org. It seems the issue you are describing

Apr 13

Sergio Rutella, … Madupuri, Ramyasree7

Apr 9

St Jude 2024 data

Hi Ramya, It is working perfectly now! Many thanks again and all the best, Sergio On Wed, 8 Apr 2026

unread,

St Jude 2024 data

Hi Ramya, It is working perfectly now! Many thanks again and all the best, Sergio On Wed, 8 Apr 2026

Apr 9

davide...@gmail.com, Nikolaus Schultz5

Apr 8

CBioPortal dataset license

Thanks for considering my suggestion :-) -- Davide Chicco On Wed, Apr 8, 2026 at 3:47 PM Nikolaus

unread,

CBioPortal dataset license

Thanks for considering my suggestion :-) -- Davide Chicco On Wed, Apr 8, 2026 at 3:47 PM Nikolaus

Apr 8

Yuliia Orlova, Gaofei Zhao2

Apr 7

Cbio Portal with Nginx

Hi Yuliia, The issue seems related to a CORS error. Could you try these steps? Bring down docker-

unread,

Cbio Portal with Nginx

Hi Yuliia, The issue seems related to a CORS error. Could you try these steps? Bring down docker-

Apr 7

Search

Clear search

Close search

Google apps

Main menu