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bisque bioimage
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Bisque mailing list
Activities and questions related to the Bio-Image Semantic Query User Environment project.
http://bioimage.ucsb.
edu/bisque
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satish yadav
,
kgk
3
5/5/20
Problem with service in bisque
Hi Kris Thank you so much for quick reponse. I have updated the code for google API Version 3. Can
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Problem with service in bisque
Hi Kris Thank you so much for quick reponse. I have updated the code for google API Version 3. Can
5/5/20
Bene
,
kgk
7
3/20/20
Problem with docker image
Hi Kristian, Registering the modules is not the problem. Using http://localhost:8080/engine_service,
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Problem with docker image
Hi Kristian, Registering the modules is not the problem. Using http://localhost:8080/engine_service,
3/20/20
Bene
2
3/19/20
Creating a new image in a custom module
I just found the answer myself. For documentation purposes, here is what seemds to work: See also
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Creating a new image in a custom module
I just found the answer myself. For documentation purposes, here is what seemds to work: See also
3/19/20
David Tyemnyák
,
kgk
3
11/27/18
Cannot access features over HTTP GET
Oh. Thank you! Dne úterý 27. listopadu 2018 21:37:27 UTC+1 kgk napsal(a): Feature service is no
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Cannot access features over HTTP GET
Oh. Thank you! Dne úterý 27. listopadu 2018 21:37:27 UTC+1 kgk napsal(a): Feature service is no
11/27/18
David Tyemnyák
, …
satish yadav
10
11/14/18
Problems when installing Bisque locally
It works! Not sure, which package exactly, but I have installed git (it was not installed by default)
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Problems when installing Bisque locally
It works! Not sure, which package exactly, but I have installed git (it was not installed by default)
11/14/18
kgk
,
João Mamede
3
11/6/18
Re: [bisque-bioimage] I hope this i
yes. specifying localhost as the listening address forces a single listening socket to be opened on
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Re: [bisque-bioimage] I hope this i
yes. specifying localhost as the listening address forces a single listening socket to be opened on
11/6/18
João Mamede
11/3/18
The SSL certificate for bisque is not working for me
Hi, When I try to connect to bisque website my browser tells me the certificate is expired and when I
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The SSL certificate for bisque is not working for me
Hi, When I try to connect to bisque website my browser tells me the certificate is expired and when I
11/3/18
João Mamede
,
kgk
3
11/3/18
Bisque server to accept connections from LAN
Ty, I'll give it a try. On Saturday, 3 November 2018 15:44:36 UTC-5, kgk wrote: Hello João I
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Bisque server to accept connections from LAN
Ty, I'll give it a try. On Saturday, 3 November 2018 15:44:36 UTC-5, kgk wrote: Hello João I
11/3/18
mce...@ucsb.edu
,
kgk
10
10/8/18
Issues installing bisque from source
In bisque_8080.log, I saw serving on 0.0.0.0:8080, then after accessing, I get something along the
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Issues installing bisque from source
In bisque_8080.log, I saw serving on 0.0.0.0:8080, then after accessing, I get something along the
10/8/18
rav...@ucsb.edu
, …
Dmitry Fedorov
5
8/17/18
Suggestions on setting up Bisque system on our own server
Hi Ryan, I've already had requests to support COGEO, not sure why it's not being red right
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Suggestions on setting up Bisque system on our own server
Hi Ryan, I've already had requests to support COGEO, not sure why it's not being red right
8/17/18
satish yadav
,
kgk
5
7/10/18
Installing Bisue Using source-code on Windows10
Thank you Kris for the reply. It did not ask for any email server during the question answer during
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Installing Bisue Using source-code on Windows10
Thank you Kris for the reply. It did not ask for any email server during the question answer during
7/10/18
Matt O'Brien
6/13/18
assign an image to a dataset programatically
Hi, Could some please furnish me with a python code example for how I can assign an image (by
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assign an image to a dataset programatically
Hi, Could some please furnish me with a python code example for how I can assign an image (by
6/13/18
Matt O'Brien
,
kgk
7
6/8/18
error in import bisque
Great news!! Is it avail yet? Pip seems to be a version from 2017 still.
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error in import bisque
Great news!! Is it avail yet? Pip seems to be a version from 2017 still.
6/8/18
kgk
6/8/18
Spam postings (now a members only list)
We have closed the list to public postings. Previously anyone (without logging in) could post a
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Spam postings (now a members only list)
We have closed the list to public postings. Previously anyone (without logging in) could post a
6/8/18
Kiranmayi Patibandla
,
kgk
2
5/31/18
Encountering error while performing installation
This page suggests that you are not using the latest docker : https://docs.docker.com/toolbox/
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Encountering error while performing installation
This page suggests that you are not using the latest docker : https://docs.docker.com/toolbox/
5/31/18
Rohit Sarparapu
,
kgk
2
5/15/18
Regarding Installation of BISQUE platform
Hello Rohit , This is our preferred installation method: Install docker (light weight VM) on you
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Regarding Installation of BISQUE platform
Hello Rohit , This is our preferred installation method: Install docker (light weight VM) on you
5/15/18
Michael Denslow
,
Dmitry Fedorov
4
5/10/18
BisQue "rotate=guess" param
Do you know which EXIF tags specifically it uses? I should, I guess, since I wrote it:) It uses
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BisQue "rotate=guess" param
Do you know which EXIF tags specifically it uses? I should, I guess, since I wrote it:) It uses
5/10/18
Hauser,Bernard A
,
kgk
2
4/24/18
Internal error with SeedSize
Hi. Could you tell us which system you are using? On Tue, Apr 24, 2018 at 1:01 PM Hauser,Bernard A
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Internal error with SeedSize
Hi. Could you tell us which system you are using? On Tue, Apr 24, 2018 at 1:01 PM Hauser,Bernard A
4/24/18
Matt O'Brien
,
Dmitry Fedorov
7
4/17/18
from BQImagePixels to numpy array without saving to disk?
My question is very simple. How can I get the pixels OUT of the BQImagePixels container. I don't
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from BQImagePixels to numpy array without saving to disk?
My question is very simple. How can I get the pixels OUT of the BQImagePixels container. I don't
4/17/18
mattob...@gmail.com
, …
Dmitry Fedorov
6
4/17/18
what formats can I extract images in?
Hi Matt, So, if I were to require BisQue to export slice of a dicom, which should be a raw greyscale
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what formats can I extract images in?
Hi Matt, So, if I were to require BisQue to export slice of a dicom, which should be a raw greyscale
4/17/18
Matt O'Brien
,
kgk
4
4/16/18
getting counts of images
AHA! Yes! Turns out it was a permissions issue. Thanks!
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getting counts of images
AHA! Yes! Turns out it was a permissions issue. Thanks!
4/16/18
Matt O'Brien
,
Dmitry Fedorov
2
3/25/18
question about getting XML for Dataset membership
Hi Matt, 1) Why can't I use the search interface to find images by their unique id? This gives me
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question about getting XML for Dataset membership
Hi Matt, 1) Why can't I use the search interface to find images by their unique id? This gives me
3/25/18
Matt O'Brien
,
Dmitry Fedorov
2
3/19/18
delete a particular tag by name
Hi Matt, If you have a list of tag URIs you might simply issue multiple DELETE requests to those tags
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delete a particular tag by name
Hi Matt, If you have a list of tag URIs you might simply issue multiple DELETE requests to those tags
3/19/18
Dmitry Fedorov
3/19/18
Re: [bisque-bioimage] Prevent system stuck when there is no internet connection
Hi Aliaksei, The key here is the what happens at the end: raise ConnectionError(err, request=request)
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Re: [bisque-bioimage] Prevent system stuck when there is no internet connection
Hi Aliaksei, The key here is the what happens at the end: raise ConnectionError(err, request=request)
3/19/18
Kevin Tu
,
kgk
2
3/13/18
Bisque Access
Hi Kevin, We usually point people to http://www.cyverse.org/products instead of downloading your own
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Bisque Access
Hi Kevin, We usually point people to http://www.cyverse.org/products instead of downloading your own
3/13/18
Venkata R Edara
,
pndal...@gmail.com
2
2/19/18
Python API to talk to bisque
You should be contacted outside this channel, sometime today. P. On Friday, February 16, 2018 at 3:19
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Python API to talk to bisque
You should be contacted outside this channel, sometime today. P. On Friday, February 16, 2018 at 3:19
2/19/18
Venkata R Edara
,
pndal...@gmail.com
6
2/13/18
problem with bisque installation
On Fedora Linux have you tried running the docker command under sudo? % sudo docker run -p 9898:8080
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problem with bisque installation
On Fedora Linux have you tried running the docker command under sudo? % sudo docker run -p 9898:8080
2/13/18
aliak...@gmail.com
,
pndal...@gmail.com
4
2/13/18
Can I use bisque API for php web application
It's not quite clear what you are trying to do. Once you login to BisQue it has facilities for
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Can I use bisque API for php web application
It's not quite clear what you are trying to do. Once you login to BisQue it has facilities for
2/13/18
O'Brien, Matt
, …
kgk
3
1/4/18
question about search
Hi Matt, I cannot reproduce on our systems. I think after adding your search term "foo":
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question about search
Hi Matt, I cannot reproduce on our systems. I think after adding your search term "foo":
1/4/18
O'Brien, Matt
,
pndal...@gmail.com
2
11/28/17
dead link?
It's broken for me, also.
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dead link?
It's broken for me, also.
11/28/17