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Mailing list and discussion group about using the HDT serialization format for RDF datasets in the bioinformatics field.

We've extended invitations to everyone who expressed a direct interest in using the compact HDT binary file format for bioinformatics datasets at the SWAT4LS hackathon in December 2015. Let's get everyone talking on this mailing list, as right now there are too many ongoing email threads to keep track off and not everyone has been copied on all of them. Please go ahead and invite any interested colleagues and anyone we might have overlooked (once you've joined the mailing list, you can view the member list).

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1/25/18

job openings in AWS Neptune

Hi All, AWS Neptune is leading the industrial revolution for distributed graph database: https://aws.

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job openings in AWS Neptune

Hi All, AWS Neptune is leading the industrial revolution for distributed graph database: https://aws.

1/25/18

Ruben Taelman, Arto Bendiken2

6/23/16

HDT Docker container

Hi Ruben, On Thu, Jun 23, 2016 at 9:06 AM, Ruben Taelman <ruben....@ugent.be> wrote: > A

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HDT Docker container

Hi Ruben, On Thu, Jun 23, 2016 at 9:06 AM, Ruben Taelman <ruben....@ugent.be> wrote: > A

6/23/16

Arto Bendiken, … Gang Fu4

6/17/16

BioHDT working group at BioHackathon 2016

The BioHackathon here in Tsuruoka is wrapping up today. I've posted the slide deck from my

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BioHDT working group at BioHackathon 2016

The BioHackathon here in Tsuruoka is wrapping up today. I've posted the slide deck from my

6/17/16

Arto Bendiken, Ruben Verborgh3

6/14/16

HDT-MR code now on GitHub

On Tue, Jun 14, 2016 at 2:32 PM, Ruben Verborgh <ruben.v...@ugent.be> wrote: > Thanks,

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HDT-MR code now on GitHub

On Tue, Jun 14, 2016 at 2:32 PM, Ruben Verborgh <ruben.v...@ugent.be> wrote: > Thanks,

6/14/16

Gang Fu, Arto Bendiken2

6/13/16

make the default graph as the union of all of the named graphs

Hi Gang, On Tue, Jun 14, 2016 at 3:55 AM, Gang Fu <gangf...@gmail.com> wrote: > I found

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make the default graph as the union of all of the named graphs

Hi Gang, On Tue, Jun 14, 2016 at 3:55 AM, Gang Fu <gangf...@gmail.com> wrote: > I found

6/13/16

Arto Bendiken, … Ruben Verborgh14

6/13/16

Extending HDT for quads

HI Gang, > Can you show me how you do " one for the graphs "? I was thinking of a

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Extending HDT for quads

HI Gang, > Can you show me how you do " one for the graphs "? I was thinking of a

6/13/16

Gang Fu, … Arto Bendiken6

6/13/16

enable KCB option for rdf2hdt

Hi Miguel, On Wed, Dec 16, 2015 at 12:54 AM, migumar2 <migu...@gmail.com> wrote: > Hi Arto,

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enable KCB option for rdf2hdt

Hi Miguel, On Wed, Dec 16, 2015 at 12:54 AM, migumar2 <migu...@gmail.com> wrote: > Hi Arto,

6/13/16

Arto Bendiken, Michel Dumontier2

3/2/16

Fwd: Reminder ISWC2016: Call for Workshops & Tutorials

yes m. Michel Dumontier Associate Professor of Medicine (Biomedical Informatics), Stanford University

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Fwd: Reminder ISWC2016: Call for Workshops & Tutorials

yes m. Michel Dumontier Associate Professor of Medicine (Biomedical Informatics), Stanford University

3/2/16

Bolton, Evan (NIH/NLM/NCBI) [E]

12/17/15

HDT generation update

Hi, As a part of the analysis of HDT, I am still generating HDT files (only 10% complete after

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HDT generation update

Hi, As a part of the analysis of HDT, I am still generating HDT files (only 10% complete after

12/17/15

Gang Fu, … Egon Willighagen8

12/17/15

jena fuseki with hdt files

One limitation I have always experienced with Jena is that is processes the SPARQL... that means that

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jena fuseki with hdt files

One limitation I have always experienced with Jena is that is processes the SPARQL... that means that

12/17/15

Arto Bendiken, … Bas Stringer4

12/14/15

Welcome to the BioHDT mailing list

With reference this time: [1] http://linkeddatafragments.org/publications/eswc2015-lodl.pdf On 14

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Welcome to the BioHDT mailing list

With reference this time: [1] http://linkeddatafragments.org/publications/eswc2015-lodl.pdf On 14

12/14/15

Egon Willighagen

12/14/15

updated Wikidata HDT file?

Hi all, while I don't have a lot of time this week, I converted the WikiPathways RDF into a HDT

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updated Wikidata HDT file?

Hi all, while I don't have a lot of time this week, I converted the WikiPathways RDF into a HDT

12/14/15

12/14/15

Fwd: [hdt-cpp] Expected HDT compressibility? (#20)

Per Arto's request, I'm forwarding this message to the new mailing list. To those that

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Fwd: [hdt-cpp] Expected HDT compressibility? (#20)

Per Arto's request, I'm forwarding this message to the new mailing list. To those that

12/14/15

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