Singlets
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Amir M. Zadeh
Jul 12, 2012, 7:15:24 PM7/12/12
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Hi
I was wondering why is it that all contigs are ending up in "perfix.singlets.fasta" file?
The number of sequences in "perfix.ZORRO.fasta" is exactly equal to the numbers of sequences in "perfixl.singlets.fasta".
Is there any specific file for singlets?
Thanks
Amir
Gustavo Lacerda
Jul 19, 2012, 9:22:59 AM7/19/12
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Hi Amir,
Zorro singlets, per definition, are contigs (either from assembly1 or assembly2) that could not be merged to any other contig. The scenario you are describing could occur no begin/end or end/begin alignments were found between the original contigs. Could you tell us what are you trying to assemble? If posible, could you please send me the log file?
Yours,
Gustavo
Zorro singlets, per definition, are contigs (either from assembly1 or assembly2) that could not be merged to any other contig. The scenario you are describing could occur no begin/end or end/begin alignments were found between the original contigs. Could you tell us what are you trying to assemble? If posible, could you please send me the log file?
Yours,
Gustavo
2012/7/12 Amir M. Zadeh <amirm...@gmail.com>
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