Tomcat issue after restarting

[Benjamin Yvernault]

Hi guys,

I have been trying to solve this issue for half the day but I still have no ideas what could be the problem.

XNAT was running smoothly and we had no more space on the folder where xnat and tomcat was installed.

We mounted 20G on /extra and move our /opt that contained xnat and tomcat into /extra and created a symbolic for the folder opt back in /.

When I restarted tomcat, it seems to be fine. A week later, I realised when I tried to upload some data to XNAT that I can't. I tried to restart tomcat but I see:

HTTP Status 500 - No WebApplicationContext found: no ContextLoaderListener registered?

---

type Exception report

message No WebApplicationContext found: no ContextLoaderListener registered?

description The server encountered an internal error that prevented it from fulfilling this request.

exception

java.lang.IllegalStateException: No WebApplicationContext found: no ContextLoaderListener registered?
	org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:159)

note The full stack trace of the root cause is available in the Apache Tomcat/6.0.36 logs.

---

Apache Tomcat/6.0.36

I have seen some post with this message and the issue was using tomcat 8 but I am using tomcat 6.0.34. 

When I look at the log, I can see this in the localhost logs:

May 25, 2016 4:51:49 PM org.apache.catalina.core.ApplicationContext log

INFO: Initializing Spring FrameworkServlet 'spring-mvc'

May 25, 2016 4:51:56 PM org.apache.catalina.core.ApplicationContext log

SEVERE: StandardWrapper.Throwable

org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dataCacheItemDAO': Injection of autowired dependencies failed; nested exception is org.springframework.beans.factory.BeanCreationException: Could not autowire field: private org.hibernate.SessionFactory org.nrg.framework.orm.hibernate.AbstractHibernateDAO._factory; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'sessionFactory' defined in ServletContext resource [/WEB-INF/conf/orm-config.xml]: Invocation of init method failed; nested exception is org.hibernate.cache.CacheException: net.sf.ehcache.CacheException: java.io.IOException: Disk quota exceeded

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessPropertyValues(AutowiredAnnotationBeanPostProcessor.java:287)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1073)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:516)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:455)

at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293)

at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)

at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290)

at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:192)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:585)

at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:895)

at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:425)

at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:467)

at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:483)

at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:358)

at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:325)

at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:127)

at javax.servlet.GenericServlet.init(GenericServlet.java:212)

at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1206)

at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1026)

at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4421)

at org.apache.catalina.core.StandardContext.start(StandardContext.java:4734)

at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799)

at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779)

at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:601)

at org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1079)

at org.apache.catalina.startup.HostConfig.deployDirectories(HostConfig.java:1002)

at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:506)

at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1317)

at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:324)

at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142)

at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1065)

at org.apache.catalina.core.StandardHost.start(StandardHost.java:840)

at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057)

at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)

at org.apache.catalina.core.StandardService.start(StandardService.java:525)

at org.apache.catalina.core.StandardServer.start(StandardServer.java:754)

at org.apache.catalina.startup.Catalina.start(Catalina.java:595)

at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)

at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)

at java.lang.reflect.Method.invoke(Method.java:606)

at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)

at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)

Caused by: org.springframework.beans.factory.BeanCreationException: Could not autowire field: private org.hibernate.SessionFactory org.nrg.framework.orm.hibernate.AbstractHibernateDAO._factory; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'sessionFactory' defined in ServletContext resource [/WEB-INF/conf/orm-config.xml]: Invocation of init method failed; nested exception is org.hibernate.cache.CacheException: net.sf.ehcache.CacheException: java.io.IOException: Disk quota exceeded

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:506)

at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:84)

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessPropertyValues(AutowiredAnnotationBeanPostProcessor.java:284)

... 42 more

Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'sessionFactory' defined in ServletContext resource [/WEB-INF/conf/orm-config.xml]: Invocation of init method failed; nested exception is org.hibernate.cache.CacheException: net.sf.ehcache.CacheException: java.io.IOException: Disk quota exceeded

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1422)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:518)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:455)

at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293)

at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)

at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290)

at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:192)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.findAutowireCandidates(DefaultListableBeanFactory.java:848)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:790)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:707)

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:478)

... 44 more

Caused by: org.hibernate.cache.CacheException: net.sf.ehcache.CacheException: java.io.IOException: Disk quota exceeded

at net.sf.ehcache.hibernate.EhCacheRegionFactory.start(EhCacheRegionFactory.java:89)

at org.springframework.orm.hibernate3.LocalRegionFactoryProxy.start(LocalRegionFactoryProxy.java:74)

at org.hibernate.impl.SessionFactoryImpl.<init>(SessionFactoryImpl.java:238)

at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1872)

at org.springframework.orm.hibernate3.LocalSessionFactoryBean.newSessionFactory(LocalSessionFactoryBean.java:860)

at org.springframework.orm.hibernate3.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:779)

at org.springframework.orm.hibernate3.AbstractSessionFactoryBean.afterPropertiesSet(AbstractSessionFactoryBean.java:211)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1479)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1419)

... 54 more

Caused by: net.sf.ehcache.CacheException: java.io.IOException: Disk quota exceeded

at net.sf.ehcache.DiskStorePathManager$DiskStorePath.<init>(DiskStorePathManager.java:331)

at net.sf.ehcache.DiskStorePathManager.resolveAndLockIfNeeded(DiskStorePathManager.java:145)

at net.sf.ehcache.DiskStorePathManager.getFile(DiskStorePathManager.java:262)

at net.sf.ehcache.DiskStorePathManager.getFile(DiskStorePathManager.java:251)

at net.sf.ehcache.store.disk.DiskStorageFactory.<init>(DiskStorageFactory.java:125)

at net.sf.ehcache.store.disk.DiskStore.create(DiskStore.java:134)

at net.sf.ehcache.store.DiskBackedMemoryStore.createDiskStore(DiskBackedMemoryStore.java:61)

at net.sf.ehcache.store.DiskBackedMemoryStore.create(DiskBackedMemoryStore.java:49)

at net.sf.ehcache.Cache.initialise(Cache.java:1097)

at net.sf.ehcache.CacheManager.initializeEhcache(CacheManager.java:1306)

at net.sf.ehcache.CacheManager.addCacheNoCheck(CacheManager.java:1337)

at net.sf.ehcache.CacheManager.addConfiguredCaches(CacheManager.java:758)

at net.sf.ehcache.CacheManager.doInit(CacheManager.java:459)

at net.sf.ehcache.CacheManager.init(CacheManager.java:377)

at net.sf.ehcache.CacheManager.<init>(CacheManager.java:259)

at net.sf.ehcache.hibernate.EhCacheRegionFactory.start(EhCacheRegionFactory.java:70)

... 62 more

Caused by: java.io.IOException: Disk quota exceeded

at java.io.UnixFileSystem.createFileExclusively(Native Method)

at java.io.File.createNewFile(File.java:1006)

at net.sf.ehcache.DiskStorePathManager$DiskStorePath.<init>(DiskStorePathManager.java:322)

... 77 more

Have you seen something like this before? Any ideas what I should check?

The space is fine on the device.

Kind Regards,

Ben