If you don’t have internet access on the machine where you’re installing the pipeline engine, you can download that zip file directly on another machine then transfer it over. You then need to move or copy the gradle-4.1-all.zip file into the folder:
~/.gradle/wrapper/dists/gradle-4.1-all/bzyivzo6n839fup2jbap0tjew
That ~ should be the home folder for the user installing the pipeline. This is usually the XNAT user, but it’s fine if not: you just need to make sure that, once the pipeline engine is installed, you set the permissions so that the XNAT user can access the pipeline engine and write to files there. The easiest (and best) way is just to make the XNAT user the owner of the pipeline engine folder, e.g.:
$ chown -R xnat.xnat /data/xnat/pipeline
If you install the pipeline engine as the XNAT user, you won’t need to bother with that.
--
Rick Herrick
Sr. Programmer/Analyst
Neuroinformatics Research Group
Washington University School of Medicine
Phone: +1 (314) 273-1645
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