XNAT Step 5 Install Error

[Sarah]

Hello,
We are trying to install XNAT on a Linux machine and running into
problems
on step 5 with creating the .war files. We’re currently using the
following
configuration:

- Linux version: 2.6.9-55.0.2.ELsmp (gcc version 3.4.6 20060404 (Red
Hat 3.4.6-
8))
- Postgres: postgresql-8.4.3
located: /usr/local/pgsql
- Apache-Tomcat 5.5.28 located: /home/postgres/apache-tomcat-5.5.30
- jdk-1_5_0_22-linux-i586 located: /usr/java/jdk1_5
- xnat1.4 located:
located: /home/postgres/xnat

The only strange change I had to make was chaning the web address for
xnat
to “9090” instead of the normal “8080” because 8080 was in use. A
similar
change was made when installing Tomcat.
Here is the build.properties file:

#WINDOWS USERS: The '\' character is not supported by Maven. Do not
use
the '\' characte$
maven.appserver.home = /home/postgres/apache-tomcat-5.5.30
xdat.project.name=xnat
xdat.project.template=xnat
xdat.project.db.name=xnat
xdat.project.db.driver=org.postgresql.Driver
xdat.project.db.connection.string=jdbc:postgresql://localhost/xnat
xdat.project.db.user=postgres
xdat.project.db.password=hip9.prdt
#IMAGE FILE LOCATION (FOR USE WITH THE xnat TEMPLATE)
#Location where image data will be stored.
xdat.archive.location=/home/postgres/xnat/archive
#Location where image data may be stored temporarily before it is
stored into the
archive.
xdat.prearchive.location=/home/postgres/xnat/prearchive
#Location where cached image data should be stored
xdat.cache.location=/home/postgres/xnat/cache
xdat.smtp.server=SMTP.host.edu
xdat.admin_email=ejkae...@ucsd.edu
xdat.url=http://localhost:9090/xnat
# 'xdat.require_login' must be set to 'true' or 'false'. It governs
whether or not
user$
# prompted to login when visiting the site. If true, users will be
required to login.
$
# users will be automatically logged in using an XNAT guest account.
xdat.require_login=true
# 'xdat.enable_new_registrations' must be set to 'true' or 'false'.
Users are
provided $
# link on the Login.vm page to register for a new account. If this
variable is true,
th$
# registered account will be automatically enabled and the user will
be allowed
to immed$
# If this is false, then an email will be sent to the admin
(xdat.admin_email)
requestin$
# account be enabled, and the user will be unable to login until the
account is
enabled.
xdat.enable_new_registrations=true

Here is the output for the error. Sorry, it is long:

[echo] Creating WAR File.
xdat:buildWAR:
[echo] /home/postgres/xnat/deployments/xnat
[exec] __ __
[exec] | \/ |__ _Apache__ ___
[exec] | |\/| / _` \ V / -_) ' \ ~ intelligent projects ~
[exec] |_| |_\__,_|\_/\___|_||_| v. 1.0.2
[exec]
[exec] build:start:
[exec]
[exec] xdat:war:
[exec] turbine:init:
[exec]
[exec] turbine:check-runtime-environment:
[exec]
[exec] java:prepare-filesystem:
[exec] [mkdir] Created dir: /home/postgres/xnat/deployments/xnat/
target/
classes
[exec]
[exec] java:compile:
[exec] turbine:init:
[exec]
[exec] turbine:check-runtime-environment:
[exec]
[exec] turbine:java-compile:
[exec] Overriding previous definition of reference to
maven.compile.src.set
[exec] [copy] Copying 1087 files to /home/postgres/xnat/deployments/
xnat/
target/s
c
[exec] [copy] Copied 7 empty directories to /home/postgres/xnat/
deployments/xnat/
arget/src
[exec]
[exec] [echo] Compiling to target/classes
[exec] [echo]
[exec]
==========================================================
[exec]
[exec] NOTE: Targetting JVM 1.5, classes
[exec] will not run on earlier JVMs
[exec]
[exec]
==========================================================
[exec]
[exec] [javac] Compiling 1087 source files to /home/postgres/xnat/
deployments/xna
/target/classes
[exec] /home/postgres/xnat/deployments/xnat/target/src/org/nrg/xnat/
turbine/
modules/s
reens/PipelineScreen.java:303: name clash:
getCurrentPipeline(java.util.ArrayList<org.nrg
xdat.om.ArcProjectDescendantPipelineI>,java.util.ArrayList<org.nrg.xdat.om.Wrk
Workflowdat
>,java.lang.String) and
getCurrentPipeline(java.util.ArrayList<org.nrg.xdat.om.ArcProject
ipelineI>,java.util.ArrayList<org.nrg.xdat.om.WrkWorkflowdata>,java.lang.String)
have the
same erasure
[exec] protected ArcProjectDescendantPipelineI
getCurrentPipeline(ArrayList<ArcPr
jectDescendantPipelineI> pipelines, ArrayList<WrkWorkflowdata>
workflows,
String pipelin
_step) {
[exec]
^
[exec] /home/postgres/xnat/deployments/xnat/target/src/org/nrg/xnat/
turbine/
modules/s
reens/PipelineScreen.java:329: name clash:
getRequestedPipeline(java.util.ArrayList<org.n
g.xdat.om.ArcProjectDescendantPipelineI>,java.lang.String,java.util.ArrayList)
and getReq
estedPipeline(java.util.ArrayList<org.nrg.xdat.om.ArcProjectPipelineI>,java.lang.
String,j
va.util.ArrayList) have the same erasure
[exec] protected ArcProjectDescendantPipelineI
getRequestedPipeline(ArrayList<Arc
rojectDescendantPipelineI> pipelines, String pipeline_step, ArrayList
skipToList) {
[exec]
^
[exec] /home/postgres/xnat/deployments/xnat/target/src/org/nrg/xnat/
turbine/
modules/s
reens/PipelineScreen.java:347: name clash:
getNextPipelineFromWorkflow(java.util.ArrayLis
<org.nrg.xdat.om.ArcProjectDescendantPipelineI>,java.util.ArrayList<org.nrg.xda
t.om.WrkWo
kflowdata>) and
getNextPipelineFromWorkflow(java.util.ArrayList<org.nrg.xdat.om.ArcProjec
PipelineI>,java.util.ArrayList<org.nrg.xdat.om.WrkWorkflowdata>) have
the same
erasure
[exec] protected ArcProjectDescendantPipelineI
getNextPipelineFromWorkflow(ArrayL
st<ArcProjectDescendantPipelineI> pipelines,
ArrayList<WrkWorkflowdata>
workflows) {
[exec]
^
[exec] /home/postgres/xnat/deployments/xnat/target/src/org/nrg/xnat/
turbine/
modules/s
reens/PipelineScreen.java:310:
getRequestedPipeline(java.util.ArrayList<org.nrg.xdat.om.A
cProjectPipelineI>,java.lang.String,java.util.ArrayList) in
org.nrg.xnat.turbine.modules.
creens.PipelineScreen cannot be applied to
(java.util.ArrayList<org.nrg.xdat.om.ArcProjec
DescendantPipelineI>,java.lang.String,java.util.ArrayList)
[exec]
return getRequestedPipeline(pipelines,pipeline_step,skipToList);
[exec]
^
[exec] /home/postgres/xnat/deployments/xnat/target/src/org/nrg/xnat/
turbine/
modules/s
reens/PipelineScreen.java:323:
getNextPipelineFromWorkflow(java.util.ArrayList<org.nrg.xd
t.om.ArcProjectPipelineI>,java.util.ArrayList<org.nrg.xdat.om.WrkWorkflowdata>)
in org.nr
.xnat.turbine.modules.screens.PipelineScreen cannot be applied to
(java.util.ArrayList<or
.nrg.xdat.om.ArcProjectDescendantPipelineI>,java.util.ArrayList<org.nrg.xdat.om.
WrkWorkfl
wdata>)
[exec]
return getNextPipelineFromWorkflow(pipelines,workflows);
[exec]
^
[exec] Note: Some input files use or override a deprecated API.
[exec] Note: Recompile with -Xlint:deprecation for details.
[exec] Note: Some input files use unchecked or unsafe operations.
[exec] Note: Recompile with -Xlint:unchecked for details.
[exec] 5 errors
[exec]
[exec] BUILD FAILED
[exec] File...... /home/postgres/xnat/plugin-resources/cache/maven-
java-
plugin-1.5/pl
gin.jelly
[exec] Element... ant:javac
[exec] Line...... 63
[exec] Column.... 48
[exec] Compile failed; see the compiler error output for details.
[exec] Total time: 25 seconds
[exec] Finished at: Mon Jul 12 16:08:36 PDT 2010
[exec]
[exec] [ERROR] Result: 70

Any thoughts you have on how we can fix this error would be greatly
appreciated!

[Olsen, Timothy]

Sarah,

Are you building XNAT from source? It appears so. You may want to use the xdat_release_1_4 (1.4 release) module in Mercurial rather than the xdat_release (development version).

That said, I think this is an old bug which was re-introduced on the development branch a few weeks ago. I think if you upgrade to java 1.6 the bug would go away.

Tim

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[Sarah]

Thanks Tim. We're all installed and running!
Sarah

> xdat.admin_email=ejkaest...@ucsd.edu

[Sarah]

Actually, we're not totally up and running. We're able to create
projects, but aren't able to access them. It says there are 4
projects, but none are being displayed. We tried as "admin" and as
"boss," but can't seem to find them. When we search for the projects,
nothing comes up.
Also, we've been having a problem accessing our xnat web app from
computers other than the computer on which it is installed. Any
thoughts on how we might be able to set that up properly?
Thanks!
Sarah

[Olsen, Timothy]

Regarding site accessibility, what URL are you using to access your site?  You could try the IP address of the machine.  Also, is there a firewall between you and the server?

 

Regarding the projects, when you login to XNAT as the admin account, do any projects show up in the Projects Box in the lower middle of the page.

 

 

What happens after you create a new project?  Does the new project show up in that box when you return to the homepage?

[Sarah]

Hi Tim,
Thanks for your help.
For the project problem - there is nothing in that projects box, even
thought it says on the top that there are 4 projects (the counter,
under Search at the very top of the screen). We thought that is where
they should appear, but both the "Projects" and "Recent Data Activity"
boxes are empty. New projects also do not show up, even though they
get added to that project count. I tried under both "admin" and
"boss," but they don't show up under either.
As for the access problem, we tried:
-A RH-Firewall-1-INPUT -m state --state NEW -m tcp -p tcp --dport 80 -
j ACCEPT
but that didn't fix the problem.
Thanks for any help you might have!
Sarah

On Jul 15, 1:35 pm, "Olsen, Timothy" <t...@npg.wustl.edu> wrote:
> Regarding site accessibility, what URL are you using to access your site?  You could try the IP address of the machine.  Also, is there a firewall between you and the server?
>
> Regarding the projects, when you login to XNAT as the admin account, do any projects show up in the Projects Box in the lower middle of the page.
>

> [cid:image001....@01CB2433.4B61E530]

> ...
>
> read more »
>
>  image001.jpg
> 47KViewDownload

[Olsen, Timothy]

Sarah,

What URL are you using to access your site in the web browser? What URL did you specify in the Settings page for the Site URL?

Thanks,
TIm
________________________________________
From: xnat_di...@googlegroups.com [xnat_di...@googlegroups.com] On Behalf Of Sarah [slis...@gmail.com]
Sent: Thursday, July 15, 2010 6:24 PM

--

[Sarah]

Hi Tim,
I am trying to access http://137.110.177.140:9090/xnat, which is the
same URL that is specified in the settings page.
Sarah

On Jul 15, 4:44 pm, "Olsen, Timothy" <t...@npg.wustl.edu> wrote:
> Sarah,
>
> What URL are you using to access your site in the web browser?  What URL did you specify in the Settings page for the Site URL?
>
> Thanks,
> TIm
> ________________________________________

> From: xnat_di...@googlegroups.com [xnat_di...@googlegroups.com] On Behalf Of Sarah [slisr...@gmail.com]

> ...
>
> read more »

[Adam Harding]

>...we've been having a problem accessing our xnat web app from computers other than the computer on which it is installed.

What kind of problem? If the browser just times out, it's probably the
firewall. If dropping the firewall for testing isn't an available (or
wise) option in your environment, make sure that you have at least
rules allowing access via the external interface to the app server
(9090) and the built-in web server (8180); same with the DICOM AET
port for DicomServer if you install it.

Since you're not proxying requests for the webapp through the http
port, allowing port 80 won't have an effect; your webserver doesn't
see those requests. You could add logging rules to your iptables
ruleset for further troubleshooting if needed.

> I am trying to access http://137.110.177.140:9090/xnat, which is the same URL that is specified in the settings page.

You posted that your build.properties was originally set up with this:
> xdat.url=http://localhost:9090/xnat

It might be worth rebuilding the installation (save the one you have
now, of course) to make sure there aren't any latent references
causing problems (or about to cause them, when you can access it from
other systems). Tim or others more familiar with the schema, feel free
to inform this superstition of mine.

Adam

On Jul 15, 6:50 pm, Sarah <slisr...@gmail.com> wrote:
> Hi Tim,

> I am trying to accesshttp://137.110.177.140:9090/xnat, which is the

> ...
>
> read more »

[Olsen, Timothy]

You should be safe changing the Site URL without reinstalling, otherwise you're on target. The value in the build.properties is only used as a starter value now. The value used by XNAT is pulled from the database. Many of the build.properties values are legacy items which are primarily used as starter values (they can be handy as such). Modifying the Site URL is something I do with some frequency.

I am still curious what happens after you add a new project. Does it show up in the Projects box?

A few more questions...

Is there anything non-standard about your install?

Was this site upgraded from a previous version?

Has the project box ever worked on this server?

Thanks,
Tim

Adam

--

[Sarah]

Hi Tim,
Thanks for your help. We're still working on the access issue.
In the mean time, as for the projects issue:
1. Nothing shows up in the projects box (there has never been anything
that shows up in that box)
2. We installed with all the settings from the web instructions. The
only thing that might be different is our port is 9090, not 8080.
3. The site was not upgraded. This is a brand new install. However,
1.3.3 was originally installed on this machine, but was wiped (the
whole user was wiped) prior to the install of 1.4.
4. No, the project box has never worked on this server.

Thanks!
Sarah

> ...
>
> read more »

[Olsen, Timothy]

Are there any errors in the tomcat/webapps/xnat/logs/xdat.log file? Or, application.log?

Tim

Thanks!
Sarah

--

[Sarah]

Hi Tim,
Yes, there are many lines of errors in the xdat.log file. I will
attach them below. There is also one error in the applications.log
file, which is:
2010-07-14 12:57:37,198 [main] FATAL
org.apache.jasper.EmbeddedServletOptions - The scratchDir you
specified: /home/postgres/apache-tomcat-5.5.30/work/Catalina/localhost/
xnat is unusable.

Here is the error from the xdat.log file:
2010-07-15 09:03:42,800 [http-9090-Processor22] ERROR
org.nrg.xnat.restlet.resources.search.SearchResource - Failed POST
org.postgresql.util.PSQLException: ERROR: relation "proj_mr_counts"
does not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
298)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:
261)
at org.nrg.xft.db.PoolDBUtils.executeNonSelectQuery(PoolDBUtils.java:
365)
at org.nrg.xft.db.PoolDBUtils.ExecuteNonSelectQuery(PoolDBUtils.java:
402)
at org.nrg.xft.db.MaterializedView.save(MaterializedView.java:257)
at
org.nrg.xnat.restlet.resources.search.SearchResource.handlePost(SearchResource.java:
245)
at org.restlet.Finder.handle(Finder.java:357)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at com.noelios.restlet.StatusFilter.doHandle(StatusFilter.java:130)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at
com.noelios.restlet.application.ApplicationHelper.handle(ApplicationHelper.java:
112)
at org.restlet.Application.handle(Application.java:341)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at org.restlet.Component.handle(Component.java:673)
at org.restlet.Server.handle(Server.java:331)
at com.noelios.restlet.ServerHelper.handle(ServerHelper.java:68)
at
com.noelios.restlet.http.HttpServerHelper.handle(HttpServerHelper.java:
147)
at
com.noelios.restlet.ext.servlet.ServerServlet.service(ServerServlet.java:
881)
at
org.nrg.xnat.restlet.servlet.XNATRestletServlet.service(XNATRestletServlet.java:
25)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:03:55,802 [http-9090-Processor25] ERROR
org.nrg.xnat.turbine.utils.XNATUtils -
org.postgresql.util.PSQLException: ERROR: relation
"displayfields_xnat_investigatordata" does not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.executeQuery(AbstractJdbc1Statement.java:
233)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.executeQuery(AbstractJdbc1Statement.java:
221)
at
org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement.java:
205)
at org.nrg.xft.db.PoolDBUtils.executeSelectQuery(PoolDBUtils.java:
490)
at org.nrg.xft.search.TableSearch.Execute(TableSearch.java:205)
at
org.nrg.xdat.security.ElementSecurity.GetDistinctIdValuesFor(ElementSecurity.java:
958)
at
org.nrg.xnat.turbine.utils.XNATUtils.getInvestigatorsForCreate(XNATUtils.java:
99)
at
org.nrg.xnat.turbine.utils.XNATUtils.getInvestigatorsForCreate(XNATUtils.java:
87)
at
org.nrg.xnat.turbine.modules.screens.XDATScreen_add_xnat_projectData.finalProcessing(XDATScreen_add_xnat_projectData.java:
38)
at
org.nrg.xdat.turbine.modules.screens.EditScreenA.doBuildTemplate(EditScreenA.java:
120)
at
org.nrg.xdat.turbine.modules.screens.SecureScreen.doBuildTemplate(SecureScreen.java:
81)
at
org.apache.turbine.modules.screens.TemplateScreen.doBuild(TemplateScreen.java:
100)
at org.apache.turbine.modules.Screen.build(Screen.java:57)
at org.apache.turbine.modules.ScreenLoader.eval(ScreenLoader.java:
104)
at
org.apache.turbine.modules.layouts.VelocityOnlyLayout.doBuild(VelocityOnlyLayout.java:
92)
at org.apache.turbine.modules.Layout.build(Layout.java:53)
at org.apache.turbine.modules.LayoutLoader.exec(LayoutLoader.java:98)
at
org.apache.turbine.modules.pages.DefaultPage.doBuild(DefaultPage.java:
146)
at org.apache.turbine.modules.Page.build(Page.java:53)
at org.apache.turbine.modules.PageLoader.exec(PageLoader.java:98)
at org.apache.turbine.Turbine.doGet(Turbine.java:751)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:627)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:06:24,533 [http-9090-Processor23] ERROR
org.nrg.xnat.restlet.resources.search.SearchResource - Failed POST
org.postgresql.util.PSQLException: ERROR: relation "sub_projects" does
not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
298)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:
261)
at org.nrg.xft.db.PoolDBUtils.executeNonSelectQuery(PoolDBUtils.java:
365)
at org.nrg.xft.db.PoolDBUtils.ExecuteNonSelectQuery(PoolDBUtils.java:
402)
at org.nrg.xft.db.MaterializedView.save(MaterializedView.java:257)
at
org.nrg.xnat.restlet.resources.search.SearchResource.handlePost(SearchResource.java:
245)
at org.restlet.Finder.handle(Finder.java:357)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at com.noelios.restlet.StatusFilter.doHandle(StatusFilter.java:130)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at
com.noelios.restlet.application.ApplicationHelper.handle(ApplicationHelper.java:
112)
at org.restlet.Application.handle(Application.java:341)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at org.restlet.Component.handle(Component.java:673)
at org.restlet.Server.handle(Server.java:331)
at com.noelios.restlet.ServerHelper.handle(ServerHelper.java:68)
at
com.noelios.restlet.http.HttpServerHelper.handle(HttpServerHelper.java:
147)
at
com.noelios.restlet.ext.servlet.ServerServlet.service(ServerServlet.java:
881)
at
org.nrg.xnat.restlet.servlet.XNATRestletServlet.service(XNATRestletServlet.java:
25)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:10:57,640 [http-9090-Processor22] ERROR
org.nrg.xnat.turbine.utils.XNATUtils -
org.postgresql.util.PSQLException: ERROR: relation
"displayfields_xnat_investigatordata" does not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.executeQuery(AbstractJdbc1Statement.java:
233)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.executeQuery(AbstractJdbc1Statement.java:
221)
at
org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement.java:
205)
at org.nrg.xft.db.PoolDBUtils.executeSelectQuery(PoolDBUtils.java:
490)
at org.nrg.xft.search.TableSearch.Execute(TableSearch.java:205)
at
org.nrg.xdat.security.ElementSecurity.GetDistinctIdValuesFor(ElementSecurity.java:
958)
at
org.nrg.xnat.turbine.utils.XNATUtils.getInvestigatorsForCreate(XNATUtils.java:
99)
at
org.nrg.xnat.turbine.utils.XNATUtils.getInvestigatorsForCreate(XNATUtils.java:
87)
at
org.nrg.xnat.turbine.modules.screens.XDATScreen_add_xnat_projectData.finalProcessing(XDATScreen_add_xnat_projectData.java:
38)
at
org.nrg.xdat.turbine.modules.screens.EditScreenA.doBuildTemplate(EditScreenA.java:
120)
at
org.nrg.xdat.turbine.modules.screens.SecureScreen.doBuildTemplate(SecureScreen.java:
81)
at
org.apache.turbine.modules.screens.TemplateScreen.doBuild(TemplateScreen.java:
100)
at org.apache.turbine.modules.Screen.build(Screen.java:57)
at org.apache.turbine.modules.ScreenLoader.eval(ScreenLoader.java:
104)
at
org.apache.turbine.modules.layouts.VelocityOnlyLayout.doBuild(VelocityOnlyLayout.java:
92)
at org.apache.turbine.modules.Layout.build(Layout.java:53)
at org.apache.turbine.modules.LayoutLoader.exec(LayoutLoader.java:98)
at
org.apache.turbine.modules.pages.DefaultPage.doBuild(DefaultPage.java:
146)
at org.apache.turbine.modules.Page.build(Page.java:53)
at org.apache.turbine.modules.PageLoader.exec(PageLoader.java:98)
at org.apache.turbine.Turbine.doGet(Turbine.java:751)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:627)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:11:20,790 [http-9090-Processor22] ERROR
org.nrg.xnat.restlet.resources.search.SearchResource - Failed POST
org.postgresql.util.PSQLException: ERROR: relation "sub_projects" does
not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
298)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:
261)
at org.nrg.xft.db.PoolDBUtils.executeNonSelectQuery(PoolDBUtils.java:
365)
at org.nrg.xft.db.PoolDBUtils.ExecuteNonSelectQuery(PoolDBUtils.java:
402)
at org.nrg.xft.db.MaterializedView.save(MaterializedView.java:257)
at
org.nrg.xnat.restlet.resources.search.SearchResource.handlePost(SearchResource.java:
245)
at org.restlet.Finder.handle(Finder.java:357)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at com.noelios.restlet.StatusFilter.doHandle(StatusFilter.java:130)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at
com.noelios.restlet.application.ApplicationHelper.handle(ApplicationHelper.java:
112)
at org.restlet.Application.handle(Application.java:341)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at org.restlet.Component.handle(Component.java:673)
at org.restlet.Server.handle(Server.java:331)
at com.noelios.restlet.ServerHelper.handle(ServerHelper.java:68)
at
com.noelios.restlet.http.HttpServerHelper.handle(HttpServerHelper.java:
147)
at
com.noelios.restlet.ext.servlet.ServerServlet.service(ServerServlet.java:
881)
at
org.nrg.xnat.restlet.servlet.XNATRestletServlet.service(XNATRestletServlet.java:
25)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:11:27,024 [http-9090-Processor25] ERROR
org.nrg.xnat.turbine.utils.XNATUtils -
org.postgresql.util.PSQLException: ERROR: relation
"displayfields_xnat_investigatordata" does not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.executeQuery(AbstractJdbc1Statement.java:
233)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.executeQuery(AbstractJdbc1Statement.java:
221)
at
org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement.java:
205)
at org.nrg.xft.db.PoolDBUtils.executeSelectQuery(PoolDBUtils.java:
490)
at org.nrg.xft.search.TableSearch.Execute(TableSearch.java:205)
at
org.nrg.xdat.security.ElementSecurity.GetDistinctIdValuesFor(ElementSecurity.java:
958)
at
org.nrg.xnat.turbine.utils.XNATUtils.getInvestigatorsForCreate(XNATUtils.java:
99)
at
org.nrg.xnat.turbine.utils.XNATUtils.getInvestigatorsForCreate(XNATUtils.java:
87)
at
org.nrg.xnat.turbine.modules.screens.XDATScreen_add_xnat_projectData.finalProcessing(XDATScreen_add_xnat_projectData.java:
38)
at
org.nrg.xdat.turbine.modules.screens.EditScreenA.doBuildTemplate(EditScreenA.java:
120)
at
org.nrg.xdat.turbine.modules.screens.SecureScreen.doBuildTemplate(SecureScreen.java:
81)
at
org.apache.turbine.modules.screens.TemplateScreen.doBuild(TemplateScreen.java:
100)
at org.apache.turbine.modules.Screen.build(Screen.java:57)
at org.apache.turbine.modules.ScreenLoader.eval(ScreenLoader.java:
104)
at
org.apache.turbine.modules.layouts.VelocityOnlyLayout.doBuild(VelocityOnlyLayout.java:
92)
at org.apache.turbine.modules.Layout.build(Layout.java:53)
at org.apache.turbine.modules.LayoutLoader.exec(LayoutLoader.java:98)
at
org.apache.turbine.modules.pages.DefaultPage.doBuild(DefaultPage.java:
146)
at org.apache.turbine.modules.Page.build(Page.java:53)
at org.apache.turbine.modules.PageLoader.exec(PageLoader.java:98)
at org.apache.turbine.Turbine.doGet(Turbine.java:751)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:627)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:11:42,640 [http-9090-Processor25] ERROR
org.nrg.xnat.restlet.resources.search.SearchResource - Failed POST
org.postgresql.util.PSQLException: ERROR: relation "sub_projects" does
not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
298)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:
261)
at org.nrg.xft.db.PoolDBUtils.executeNonSelectQuery(PoolDBUtils.java:
365)
at org.nrg.xft.db.PoolDBUtils.ExecuteNonSelectQuery(PoolDBUtils.java:
402)
at org.nrg.xft.db.MaterializedView.save(MaterializedView.java:257)
at
org.nrg.xnat.restlet.resources.search.SearchResource.handlePost(SearchResource.java:
245)
at org.restlet.Finder.handle(Finder.java:357)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at com.noelios.restlet.StatusFilter.doHandle(StatusFilter.java:130)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at
com.noelios.restlet.application.ApplicationHelper.handle(ApplicationHelper.java:
112)
at org.restlet.Application.handle(Application.java:341)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at org.restlet.Component.handle(Component.java:673)
at org.restlet.Server.handle(Server.java:331)
at com.noelios.restlet.ServerHelper.handle(ServerHelper.java:68)
at
com.noelios.restlet.http.HttpServerHelper.handle(HttpServerHelper.java:
147)
at
com.noelios.restlet.ext.servlet.ServerServlet.service(ServerServlet.java:
881)
at
org.nrg.xnat.restlet.servlet.XNATRestletServlet.service(XNATRestletServlet.java:
25)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:12:19,533 [http-9090-Processor22] ERROR
org.nrg.xdat.search.DisplaySearch - Display Field not found:
'USER_ROLE.2'
2010-07-15 09:12:19,533 [http-9090-Processor22] ERROR
org.nrg.xdat.search.DisplaySearch - Display Field not found:
'LAST_ACCESSED.2'
2010-07-15 09:12:19,541 [http-9090-Processor22] ERROR
org.nrg.xnat.restlet.resources.search.SearchResource - Failed POST
org.postgresql.util.PSQLException: ERROR: relation "project_invs" does
not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
298)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:
261)
at org.nrg.xft.db.PoolDBUtils.executeNonSelectQuery(PoolDBUtils.java:
365)
at org.nrg.xft.db.PoolDBUtils.ExecuteNonSelectQuery(PoolDBUtils.java:
402)
at org.nrg.xft.db.MaterializedView.save(MaterializedView.java:257)
at
org.nrg.xnat.restlet.resources.search.SearchResource.handlePost(SearchResource.java:
245)
at org.restlet.Finder.handle(Finder.java:357)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at com.noelios.restlet.StatusFilter.doHandle(StatusFilter.java:130)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at
com.noelios.restlet.application.ApplicationHelper.handle(ApplicationHelper.java:
112)
at org.restlet.Application.handle(Application.java:341)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at org.restlet.Component.handle(Component.java:673)
at org.restlet.Server.handle(Server.java:331)
at com.noelios.restlet.ServerHelper.handle(ServerHelper.java:68)
at
com.noelios.restlet.http.HttpServerHelper.handle(HttpServerHelper.java:
147)
at
com.noelios.restlet.ext.servlet.ServerServlet.service(ServerServlet.java:
881)
at
org.nrg.xnat.restlet.servlet.XNATRestletServlet.service(XNATRestletServlet.java:
25)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:24:00,097 [http-9090-Processor25] ERROR
org.nrg.xdat.turbine.modules.screens.SecureScreen -
org.apache.turbine.services.InstantiationException: ServiceBroker:
unknown service SessionService requested
at
org.apache.turbine.services.BaseServiceBroker.getServiceInstance(BaseServiceBroker.java:
504)
at
org.apache.turbine.services.BaseServiceBroker.getService(BaseServiceBroker.java:
446)
at
org.apache.turbine.services.session.TurbineSession.getService(TurbineSession.java:
104)
at
org.apache.turbine.services.session.TurbineSession.getActiveSessions(TurbineSession.java:
43)
at
org.nrg.xdat.turbine.modules.screens.XDATScreen_active_sessions.doBuildTemplate(XDATScreen_active_sessions.java:
39)
at
org.nrg.xdat.turbine.modules.screens.SecureScreen.doBuildTemplate(SecureScreen.java:
81)
at
org.apache.turbine.modules.screens.TemplateScreen.doBuild(TemplateScreen.java:
100)
at org.apache.turbine.modules.Screen.build(Screen.java:57)
at org.apache.turbine.modules.ScreenLoader.eval(ScreenLoader.java:
104)
at
org.apache.turbine.modules.layouts.VelocityOnlyLayout.doBuild(VelocityOnlyLayout.java:
92)
at org.apache.turbine.modules.Layout.build(Layout.java:53)
at org.apache.turbine.modules.LayoutLoader.exec(LayoutLoader.java:98)
at
org.apache.turbine.modules.pages.DefaultPage.doBuild(DefaultPage.java:
146)
at org.apache.turbine.modules.Page.build(Page.java:53)
at org.apache.turbine.modules.PageLoader.exec(PageLoader.java:98)
at org.apache.turbine.Turbine.doGet(Turbine.java:751)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:627)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:26:52,300 [http-9090-Processor22] ERROR
org.nrg.xdat.search.DisplaySearch - Display Field not found:
'USER_ROLE.1'
2010-07-15 09:26:52,300 [http-9090-Processor22] ERROR
org.nrg.xdat.search.DisplaySearch - Display Field not found:
'LAST_ACCESSED.1'
2010-07-15 09:26:52,310 [http-9090-Processor22] ERROR
org.nrg.xnat.restlet.resources.search.SearchResource - Failed POST
org.postgresql.util.PSQLException: ERROR: relation "project_invs" does
not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
298)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:
261)
at org.nrg.xft.db.PoolDBUtils.executeNonSelectQuery(PoolDBUtils.java:
365)
at org.nrg.xft.db.PoolDBUtils.ExecuteNonSelectQuery(PoolDBUtils.java:
402)
at org.nrg.xft.db.MaterializedView.save(MaterializedView.java:257)
at
org.nrg.xnat.restlet.resources.search.SearchResource.handlePost(SearchResource.java:
245)
at org.restlet.Finder.handle(Finder.java:357)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at com.noelios.restlet.StatusFilter.doHandle(StatusFilter.java:130)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at
com.noelios.restlet.application.ApplicationHelper.handle(ApplicationHelper.java:
112)
at org.restlet.Application.handle(Application.java:341)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at org.restlet.Component.handle(Component.java:673)
at org.restlet.Server.handle(Server.java:331)
at com.noelios.restlet.ServerHelper.handle(ServerHelper.java:68)
at
com.noelios.restlet.http.HttpServerHelper.handle(HttpServerHelper.java:
147)
at
com.noelios.restlet.ext.servlet.ServerServlet.service(ServerServlet.java:
881)
at
org.nrg.xnat.restlet.servlet.XNATRestletServlet.service(XNATRestletServlet.java:
25)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:36:50,796 [http-9090-Processor23] ERROR
org.nrg.xdat.search.DisplaySearch - Display Field not found:
'USER_ROLE.1'
2010-07-15 09:36:50,796 [http-9090-Processor23] ERROR
org.nrg.xdat.search.DisplaySearch - Display Field not found:
'LAST_ACCESSED.1'
2010-07-15 09:36:50,807 [http-9090-Processor23] ERROR
org.nrg.xnat.restlet.resources.search.SearchResource - Failed POST
org.postgresql.util.PSQLException: ERROR: relation "project_invs" does
not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
298)
at
org.apache.commons.dbcp.DelegatingStatement.execute(DelegatingStatement.java:
261)
at org.nrg.xft.db.PoolDBUtils.executeNonSelectQuery(PoolDBUtils.java:
365)
at org.nrg.xft.db.PoolDBUtils.ExecuteNonSelectQuery(PoolDBUtils.java:
402)
at org.nrg.xft.db.MaterializedView.save(MaterializedView.java:257)
at
org.nrg.xnat.restlet.resources.search.SearchResource.handlePost(SearchResource.java:
245)
at org.restlet.Finder.handle(Finder.java:357)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at com.noelios.restlet.StatusFilter.doHandle(StatusFilter.java:130)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at
com.noelios.restlet.application.ApplicationHelper.handle(ApplicationHelper.java:
112)
at org.restlet.Application.handle(Application.java:341)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at org.restlet.Router.handle(Router.java:504)
at org.restlet.Filter.doHandle(Filter.java:150)
at org.restlet.Filter.handle(Filter.java:195)
at com.noelios.restlet.ChainHelper.handle(ChainHelper.java:124)
at org.restlet.Component.handle(Component.java:673)
at org.restlet.Server.handle(Server.java:331)
at com.noelios.restlet.ServerHelper.handle(ServerHelper.java:68)
at
com.noelios.restlet.http.HttpServerHelper.handle(HttpServerHelper.java:
147)
at
com.noelios.restlet.ext.servlet.ServerServlet.service(ServerServlet.java:
881)
at
org.nrg.xnat.restlet.servlet.XNATRestletServlet.service(XNATRestletServlet.java:
25)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:49:47,200 [http-9090-Processor23] ERROR
org.nrg.xnat.turbine.modules.actions.AdminProjectAccess - Invokation
of public void
org.nrg.xnat.turbine.modules.actions.AdminProjectAccess.doPerform(org.apache.turbine.util.RunData,org.apache.velocity.context.Context)
throws java.lang.Exception
java.lang.NullPointerException
at
org.nrg.xnat.turbine.modules.actions.AdminProjectAccess.doPerform(AdminProjectAccess.java:
31)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:
25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.turbine.util.velocity.VelocityActionEvent.executeEvents(VelocityActionEvent.java:
136)
at
org.apache.turbine.util.velocity.VelocityActionEvent.perform(VelocityActionEvent.java:
78)
at
org.apache.turbine.modules.actions.VelocityAction.perform(VelocityAction.java:
72)
at
org.apache.turbine.modules.actions.VelocitySecureAction.perform(VelocitySecureAction.java:
61)
at org.apache.turbine.modules.ActionLoader.exec(ActionLoader.java:96)
at
org.apache.turbine.modules.pages.DefaultPage.doBuild(DefaultPage.java:
113)
at org.apache.turbine.modules.Page.build(Page.java:53)
at org.apache.turbine.modules.PageLoader.exec(PageLoader.java:98)
at org.apache.turbine.Turbine.doGet(Turbine.java:751)
at org.apache.turbine.Turbine.doPost(Turbine.java:846)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:647)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 09:50:11,752 [http-9090-Processor23] ERROR
org.nrg.xnat.turbine.modules.actions.AdminProjectAccess - Invokation
of public void
org.nrg.xnat.turbine.modules.actions.AdminProjectAccess.doPerform(org.apache.turbine.util.RunData,org.apache.velocity.context.Context)
throws java.lang.Exception
java.lang.NullPointerException
at
org.nrg.xnat.turbine.modules.actions.AdminProjectAccess.doPerform(AdminProjectAccess.java:
31)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:
25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.turbine.util.velocity.VelocityActionEvent.executeEvents(VelocityActionEvent.java:
136)
at
org.apache.turbine.util.velocity.VelocityActionEvent.perform(VelocityActionEvent.java:
78)
at
org.apache.turbine.modules.actions.VelocityAction.perform(VelocityAction.java:
72)
at
org.apache.turbine.modules.actions.VelocitySecureAction.perform(VelocitySecureAction.java:
61)
at org.apache.turbine.modules.ActionLoader.exec(ActionLoader.java:96)
at
org.apache.turbine.modules.pages.DefaultPage.doBuild(DefaultPage.java:
113)
at org.apache.turbine.modules.Page.build(Page.java:53)
at org.apache.turbine.modules.PageLoader.exec(PageLoader.java:98)
at org.apache.turbine.Turbine.doGet(Turbine.java:751)
at org.apache.turbine.Turbine.doPost(Turbine.java:846)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:647)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:
269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:
188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:
213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:
172)
at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:
470)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:
127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:
174)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:
879)
at org.apache.coyote.http11.Http11BaseProtocol
$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:
665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:
81)
at org.apache.tomcat.util.threads.ThreadPool
$ControlRunnable.run(ThreadPool.java:689)
at java.lang.Thread.run(Thread.java:619)
2010-07-15 15:11:05,641 [http-9090-Processor22] ERROR
org.nrg.xnat.turbine.utils.XNATUtils -
org.postgresql.util.PSQLException: ERROR: relation
"displayfields_xnat_investigatordata" does not exist

at
org.postgresql.util.PSQLException.parseServerError(PSQLException.java:
139)
at org.postgresql.core.QueryExecutor.executeV3(QueryExecutor.java:
152)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:100)
at org.postgresql.core.QueryExecutor.execute(QueryExecutor.java:43)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.execute(AbstractJdbc1Statement.java:
517)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:
50)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.executeQuery(AbstractJdbc1Statement.java:
233)
at
org.postgresql.jdbc1.AbstractJdbc1Statement.executeQuery(AbstractJdbc1Statement.java:
221)
at
org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement.java:
205)
at org.nrg.xft.db.PoolDBUtils.executeSelectQuery(PoolDBUtils.java:
490)
at org.nrg.xft.search.TableSearch.Execute(TableSearch.java:205)
at
org.nrg.xdat.security.ElementSecurity.GetDistinctIdValuesFor(ElementSecurity.java:
958)
at
org.nrg.xnat.turbine.utils.XNATUtils.getInvestigatorsForCreate(XNATUtils.java:
99)
at
org.nrg.xnat.turbine.utils.XNATUtils.getInvestigatorsForCreate(XNATUtils.java:
87)
at
org.nrg.xnat.turbine.modules.screens.XDATScreen_add_xnat_projectData.finalProcessing(XDATScreen_add_xnat_projectData.java:
38)
at
org.nrg.xdat.turbine.modules.screens.EditScreenA.doBuildTemplate(EditScreenA.java:
120)
at
org.nrg.xdat.turbine.modules.screens.SecureScreen.doBuildTemplate(SecureScreen.java:
81)
at
org.apache.turbine.modules.screens.TemplateScreen.doBuild(TemplateScreen.java:
100)
at org.apache.turbine.modules.Screen.build(Screen.java:57)
at org.apache.turbine.modules.ScreenLoader.eval(ScreenLoader.java:
104)
at org.apache.turbine.modules.la

> ...
>
> read more »

[Olsen, Timothy]

Sarah,

It looks like your database is not up to date.

Please execute the bin/update.sh script from within the XNAT folder (or xdat_release). This will generate an XNAT/projects/xnat/sql/xnat-update.sql file which should bring your database up to date.

You may want to execute that sql file via PGAdmin3 to keep a closer eye on if it has failures. Or, run it via psql, but make sure and check it for errors.

Tim

--

[Sarah]

Hi Tim,
We ran bin/update.sh, and then the xnat-update.sql file that was
made. Here is the error we get when running that second file:

psql:xnat-update.sql:57481: ERROR: function removeviews() does not
exist
LINE 1: SELECT removeViews();
^
HINT: No function matches the given name and argument types. You
might need to add explicit type casts.

Sarah

On Jul 19, 9:20 am, "Olsen, Timothy" <t...@npg.wustl.edu> wrote:
> Sarah,
>

> ...
>
> read more »

[Olsen, Timothy]

It looks like your original database create failed at some point. Try deleting that line in your xnat-update.sql 'SELECT removeViews();' and retry.

If you haven't already stored large amounts of data, I would encourage you to reinstall the database and keep a close eye on the create.sql step for failures.

Tim

________________________________________
From: xnat_di...@googlegroups.com [xnat_di...@googlegroups.com] On Behalf Of Sarah [slis...@gmail.com]
Sent: Monday, July 19, 2010 5:13 PM

Sarah

--

[Sarah]

Hi Tim,
We just wanted to let you know that we started from scratch and
reinstalled everything, and its now working! We still can't log in
from other computers, but at least we can see our projects.
Thank you so much for all your help through the process.
Sarah

On Jul 19, 4:20 pm, "Olsen, Timothy" <t...@npg.wustl.edu> wrote:
> It looks like your original database create failed at some point.  Try deleting that line in your xnat-update.sql 'SELECT removeViews();' and retry.  
>
> If you haven't already stored large amounts of data, I would encourage you to reinstall the database and keep a close eye on the create.sql step for failures.
>
> Tim
>
> ________________________________________

> From: xnat_di...@googlegroups.com [xnat_di...@googlegroups.com] On Behalf Of Sarah [slisr...@gmail.com]

> ...
>
> read more »