GridTableBase segfault crashes on macos/windows

[raf]

Hi,

macos-10.14.6, python-3.12.9 (via macports), wxPython-4.2.2 (via macports)

windows-10, python-3.12.9, wxPython-4.2.2 (via pip3)

I've converted a wxPython app from
python-2.7/wxPython-2.8.12.1 to
python3.12/wxPython-4.2.2 and we're seeing lots of
segfault crashes when using a grid (GridTableBase, was
PyGridTableBase). Has anyone seen such grid crashes?
Any ideas on what to avoid? The first grid-related
crash was fixed by stopping using a weakref for the
underlying datatable (I'm not sure why it was being
used in the first place) but crashes still happen, just
not immediately.

If someone is willing to look at it, I'll construct
smallish example code, but it probably won't be tiny.
My grids have extra behaviour to make cell editing very
automatic and keyboard-efficient.

A user reported various different actions that lead to
python crashing when interacting with a grid. I was
able to reliably crash on both mac and windows by
loading data into it and manually inserting a row at
the top.

I noticed that there was a recent release of wxWidgets.
Maybe it contains fixes that would help. Any idea when
the new version of wxWidgets will make its way into a
new version of wxPython?

Versions of wxPython seem to have long periods of time
between them, so waiting for a new version might not be
an option. Advice on how to avoid grid crashes would be
welcome.

cheers,
raf

Here's a macOS diagnostic crash report:

Process: Python [9871]
Path: /opt/local/Library/Frameworks/Python.framework/Versions/3.12/Resources/Python.app/Contents/MacOS/Python
Identifier: org.python.python
Version: 3.12.9 (3.12.9)
Code Type: X86-64 (Native)
Parent Process: zsh [2133]
Responsible: Python [9871]
User ID: 501

Date/Time: 2025-04-06 23:02:31.145 +1000
OS Version: Mac OS X 10.14.6 (18G6032)
Report Version: 12
Anonymous UUID: 452C0ED0-051E-E92A-3DE0-FE83CB80BF1E

Sleep/Wake UUID: CB77F5C8-63CF-4CD6-BCD3-3E14CCBDE604

Time Awake Since Boot: 18000 seconds
Time Since Wake: 2400 seconds

System Integrity Protection: enabled

Crashed Thread: 0 Dispatch queue: com.apple.main-thread

Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x0000000000000058
Exception Note: EXC_CORPSE_NOTIFY

Termination Signal: Segmentation fault: 11
Termination Reason: Namespace SIGNAL, Code 0xb
Terminating Process: exc handler [9871]

VM Regions Near 0x58:
-->
__TEXT 00000001031bc000-00000001031be000 [ 8K] r-x/rwx SM=COW /opt/local/Library/Frameworks/Python.framework/Versions/3.12/Resources/Python.app/Contents/MacOS/Python

Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libwx_osx_cocoau_core-3.2.0.3.0.dylib 0x0000000132cd727e wxGrid::DoHideCellEditControl() + 206
1 libwx_osx_cocoau_core-3.2.0.3.0.dylib 0x0000000132cd5ef1 wxGrid::DoDisableCellEditControl() + 97
2 libwx_baseu-3.2.0.3.0.dylib 0x000000013336ea85 wxEvtHandler::ProcessEventLocally(wxEvent&) + 213
3 libwx_baseu-3.2.0.3.0.dylib 0x000000013336e8a0 wxEvtHandler::ProcessEvent(wxEvent&) + 96
4 _grid.cpython-312-darwin.so 0x00000001336dc3c9 sipwxGrid::ProcessEvent(wxEvent&) + 105
5 libwx_baseu-3.2.0.3.0.dylib 0x000000013336e50d wxEvtHandler::ProcessPendingEvents() + 493
6 libwx_baseu-3.2.0.3.0.dylib 0x0000000133241d06 wxAppConsoleBase::ProcessPendingEvents() + 278
7 _core.cpython-312-darwin.so 0x0000000131f216a1 sipwxPyApp::ProcessPendingEvents() + 97
8 libwx_baseu-3.2.0.3.0.dylib 0x000000013333d542 wxCFEventLoop::OSXCommonModeObserverCallBack(__CFRunLoopObserver*, int, void*) + 66
9 com.apple.CoreFoundation 0x00007fff4d39e5b8 __CFRUNLOOP_IS_CALLING_OUT_TO_AN_OBSERVER_CALLBACK_FUNCTION__ + 23
10 com.apple.CoreFoundation 0x00007fff4d39e4ed __CFRunLoopDoObservers + 451
11 com.apple.CoreFoundation 0x00007fff4d340c14 __CFRunLoopRun + 1136
12 com.apple.CoreFoundation 0x00007fff4d340552 CFRunLoopRunSpecific + 455
13 com.apple.HIToolbox 0x00007fff4c6011ab RunCurrentEventLoopInMode + 292
14 com.apple.HIToolbox 0x00007fff4c600ded ReceiveNextEventCommon + 355
15 com.apple.HIToolbox 0x00007fff4c600c76 _BlockUntilNextEventMatchingListInModeWithFilter + 64
16 com.apple.AppKit 0x00007fff4a99877d _DPSNextEvent + 1135
17 com.apple.AppKit 0x00007fff4a99746b -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1361
18 com.apple.AppKit 0x00007fff4a991588 -[NSApplication run] + 699
19 libwx_osx_cocoau_core-3.2.0.3.0.dylib 0x0000000132ad307e wxGUIEventLoop::OSXDoRun() + 174
20 libwx_baseu-3.2.0.3.0.dylib 0x000000013333ddfc wxCFEventLoop::DoRun() + 44
21 libwx_baseu-3.2.0.3.0.dylib 0x0000000133278b5e wxEventLoopBase::Run() + 158
22 libwx_baseu-3.2.0.3.0.dylib 0x00000001332410e3 wxAppConsoleBase::MainLoop() + 99
23 _core.cpython-312-darwin.so 0x0000000131f20c8d wxPyApp::MainLoop() + 81
24 _core.cpython-312-darwin.so 0x0000000131f23499 meth_wxPyApp_MainLoop(_object*, _object*) + 145
25 org.python.python 0x00000001032959f2 cfunction_call + 105
26 org.python.python 0x000000010323ae92 _PyObject_MakeTpCall + 130
27 org.python.python 0x0000000103353ee1 _PyEval_EvalFrameDefault + 47070
28 org.python.python 0x000000010334852c PyEval_EvalCode + 300
29 org.python.python 0x00000001033cf840 run_eval_code_obj.llvm.2964671957866885994 + 83
30 org.python.python 0x00000001033cdba7 run_mod.llvm.2964671957866885994 + 107
31 org.python.python 0x00000001033cd151 pyrun_file + 147
32 org.python.python 0x00000001033cc652 _PyRun_SimpleFileObject + 289
33 org.python.python 0x00000001033cc287 _PyRun_AnyFileObject + 66
34 org.python.python 0x00000001033f3f2a pymain_run_file_obj + 187
35 org.python.python 0x00000001033f3bd4 pymain_run_file + 89
36 org.python.python 0x00000001033f3118 Py_RunMain + 910
37 org.python.python 0x00000001033f36fd pymain_main + 465
38 org.python.python 0x00000001033f379d Py_BytesMain + 42
39 libdyld.dylib 0x00007fff7862d3d5 start + 1

Thread 1:
0 libsystem_kernel.dylib 0x00007fff78765866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7882456e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x00000001089487eb blas_thread_server + 155
3 libsystem_pthread.dylib 0x00007fff788212eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff78824249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff7882040d thread_start + 13

Thread 2:
0 libsystem_kernel.dylib 0x00007fff78765866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7882456e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x00000001089487eb blas_thread_server + 155
3 libsystem_pthread.dylib 0x00007fff788212eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff78824249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff7882040d thread_start + 13

Thread 3:
0 libsystem_kernel.dylib 0x00007fff78765866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7882456e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x00000001089487eb blas_thread_server + 155
3 libsystem_pthread.dylib 0x00007fff788212eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff78824249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff7882040d thread_start + 13

Thread 4:
0 libsystem_pthread.dylib 0x00007fff788203f0 start_wqthread + 0

Thread 5:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff7876221a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff78762768 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4d341882 __CFRunLoopServiceMachPort + 328
3 com.apple.CoreFoundation 0x00007fff4d340df0 __CFRunLoopRun + 1612
4 com.apple.CoreFoundation 0x00007fff4d340552 CFRunLoopRunSpecific + 455
5 com.apple.AppKit 0x00007fff4a9a04a2 _NSEventThread + 175
6 libsystem_pthread.dylib 0x00007fff788212eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff78824249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff7882040d thread_start + 13

Thread 6:
0 libsystem_pthread.dylib 0x00007fff788203f0 start_wqthread + 0

Thread 7:
0 libsystem_pthread.dylib 0x00007fff788203f0 start_wqthread + 0

Thread 8:
0 libsystem_pthread.dylib 0x00007fff788203f0 start_wqthread + 0

Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000000000000 rcx: 0x00007f9f28265f20 rdx: 0x00007f9f20ef1910
rdi: 0x00007f9f22135800 rsi: 0x00007f9f22184200 rbp: 0x00007ffeeca40dc0 rsp: 0x00007ffeeca40d60
r8: 0x0000000000000001 r9: 0x0000000000000001 r10: 0x0000000132fdcd60 r11: 0x00007f9f26375f90
r12: 0x00000001334186a0 r13: 0x00007f9f24c5d240 r14: 0x0000000000000000 r15: 0x00007f9f22184200
rip: 0x0000000132cd727e rfl: 0x0000000000010202 cr2: 0x0000000000000058

Logical CPU: 0
Error Code: 0x00000004
Trap Number: 14


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External Modification Summary:
Calls made by other processes targeting this process:
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thread_create: 0
thread_set_state: 0
Calls made by this process:
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thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
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thread_create: 0
thread_set_state: 0

VM Region Summary:
ReadOnly portion of Libraries: Total=549.8M resident=0K(0%) swapped_out_or_unallocated=549.8M(100%)
Writable regions: Total=965.4M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=965.4M(100%)

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REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
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CG backing stores 992K 2
CG image 816K 50
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CoreAnimation 88.5M 32
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__TEXT 314.0M 424
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shared memory 644K 12
=========== ======= =======
TOTAL 1.6G 1265
TOTAL, minus reserved VM space 1.1G 1265

[Vadim Zeitlin]

On Mon, 7 Apr 2025 01:11:11 +1000 'raf' via wx-users wrote:

r> I've converted a wxPython app from
r> python-2.7/wxPython-2.8.12.1 to
r> python3.12/wxPython-4.2.2 and we're seeing lots of
r> segfault crashes when using a grid (GridTableBase, was
r> PyGridTableBase). Has anyone seen such grid crashes?

Hello,

I'm not aware of any crashes in wxGrid.

r> If someone is willing to look at it, I'll construct
r> smallish example code, but it probably won't be tiny.

I'm afraid you would need to debug this yourself. The first step would be
to build a version of wxWidgets with the debug symbols, so that you could
get some more useful information out of the stack trace.

r> My grids have extra behaviour to make cell editing very
r> automatic and keyboard-efficient.

It's possible that this somehow breaks wxGrid assumptions and results in
dereferencing an invalid pointer in DoHideCellEditControl(). But it would
be really better to just see where exactly it crashes rather than try to
guess.

r> I noticed that there was a recent release of wxWidgets.
r> Maybe it contains fixes that would help. Any idea when
r> the new version of wxWidgets will make its way into a
r> new version of wxPython?

No, sorry. This would be a question for the wxPython developers.

Regards,
VZ

--
TT-Solutions: wxWidgets consultancy and technical support
https://www.tt-solutions.com/

[Scott Talbert]

On Mon, 7 Apr 2025, 'raf' via wx-users wrote:

> I've converted a wxPython app from
> python-2.7/wxPython-2.8.12.1 to
> python3.12/wxPython-4.2.2 and we're seeing lots of
> segfault crashes when using a grid (GridTableBase, was
> PyGridTableBase). Has anyone seen such grid crashes?
> Any ideas on what to avoid? The first grid-related
> crash was fixed by stopping using a weakref for the
> underlying datatable (I'm not sure why it was being
> used in the first place) but crashes still happen, just
> not immediately.
>
> If someone is willing to look at it, I'll construct
> smallish example code, but it probably won't be tiny.
> My grids have extra behaviour to make cell editing very
> automatic and keyboard-efficient.

The wxPython memory management for wxGrid is somewhat complicated, so it's
possible there could be a bug there. It's also possible there could be a
bug in your code (perhaps a memory leak was fixed in wxPython?). But
either way, yes, the best way would be to produce a small, self-contained
reproducer.

> I noticed that there was a recent release of wxWidgets.
> Maybe it contains fixes that would help. Any idea when
> the new version of wxWidgets will make its way into a
> new version of wxPython?

The latest version of wxWidgets has already been incorporated into
wxPython git. I'm planning a new release of wxPython soon. But I
strongly suspect in this case that the problem isn't wxWidgets specific.

Scott

[raf]

Thanks. I was hoping the stack trace would be enough for someone to see
where it crashed. If I'm allowed to pursue this, I'll let you know what
I discover, but there are plans to replace the gui with something else,
so maybe not. Maybe it's something that can be fixed in wxPython. I'll
work on a demonstration program for the wxPython list.

cheers,
raf

[raf]

Thanks. Sorry for the delay in responding. I'll work on a demonstration
program and send it when I can.

cheers,
raf