Request for demo

[Eithar Mohamed]

Hello,

I have genes listed from different resources that are differentially expressed between B-ALL and normal, I wonder how can put my genes in pathways enriched. I request an online meeting as I am new to technology.

BW

E

[Alex Pico]

Hi E,

We are primarily a pathway database. The pathways curated at WikiPathways database are then used by lots of different tools for enrichment analysis. Here’s a list:

https://new.wikipathways.org/tools.html

For someone new to technology, I would recommend the Enrichr and g:Profiler sites. You simply paste in your gene list and they will perform enrichment against many resources, including WikiPathways:

 * https://amp.pharm.mssm.edu/Enrichr/

 * https://biit.cs.ut.ee/gprofiler/gost 

Our team also maintains a couple software tools that you can download, install and run yourself to perform enrichment analysis. Each has their own site with tutorials:

 * Pathvisio: https://pathvisio.org/ 

 * Cytoscape: https://cytoscape.org/ (plus Enrichment Table app)

Good luck!
 - Alex