Need help in altering the pathway

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Susmidaseni Balakrishnan

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Jul 1, 2024, 11:27:35 AMJul 1
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Hello wikipathway 
                     Im a PhD student who is working on structural biology. I got stuck in pathway alteration where i need to knock out a gene and analyse whether that function is happening or not. Is it possible to work on Pathvisio and can i analyse the results by uploading the KEGG pathway in specific format.


Thank you,

Regards,
Susmida Seni B
Research Scholar

Kristina Hanspers

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Jul 1, 2024, 3:19:19 PMJul 1
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Hi,

PathVisio can't open pathways from KEGG directly, unfortunately. You could see if there's a pathway at WikiPathways that covers the same content as what you're interested in, which you can then edit the pathway in PathVisio for downstream analysis.

Regards,

Kristina
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