The 'total area of watershed for direct runoff' is just the portion of the watershed that contributes overland flow and channelized flow to your wetland. It should be considerably smaller than the 292,000 acre area.
If you have small channels within the 'total area of watershed for direct runoff' that have a base flow component that flows into your wetland, you should estimate the total head added to the wetland each month from the base flow component. To do this, estimate the volume of water added to the wetland, then divide the volume by the constructed wetland area. Once you've estimated the head that would be added from base flow, set up a user-in time series to represent the base flow component. The combination of the user-in base flow component and the curve number method estimate of runoff added to the wetland based on your 'total area of watershed for direct surface runoff' should be representative of the total water added to the wetland from a large adjacent area that has channelized flow. The curve number method will only estimate runoff fur precipitation events that are greater than the initial abstraction (the initial precipitation after which runoff begins, determined within Wetbud).
You could have Wetbud estimate how much water is added to the wetland when the adjacent river has enough discharge to come out of bank. With a watershed that large, it would be best to use hourly stage data from a nearby steam gage.