Hey Tony!
Scaffolding doesn't exist yet, so there's no way to "init" a new project - yet. This is high on the to-do list, but we are first aiming for feature parity with the current Grunt-based ngbp build. However, you have correctly surmised the "important bits" are the script and style includes.
The basic procedure (which probably *should* be added to the docs) is only to init the new NPM project:
$ mkdir new-project && cd new-project
$ npm init
$ npm install --save-dev warlock-spell-angularjs
Technically, Warlock is completely set up - there's just nothing to build. Creating the files as needed (starting with `index.html`, of course) is the next step.
The reason the tutorial follows the ngbp approach is because the vast majority of testers for the alpha will be existing ngbp users and the short-term goal, as I mentioned, is feature parity with that, so it's a reasonable place to start for most.
Josh