Did you figure it out? I have the same problem. I can see in tcpdump that the packets with events are delivered and even mysql log shows that the waf-fle connects to it, select couple things but doesn't save anything...
/usr/sbin/mysqld, Version: 5.7.24-0ubuntu0.18.04.1-log ((Ubuntu)). started with:
Tcp port: 3306 Unix socket: /var/run/mysqld/mysqld.sock
2018-11-15T07:34:53.358530Z 2 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.369283Z 2 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.369603Z 2 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.370823Z 2 Prepare SELECT sensor_id, name, IP, client_ip_via, client_ip_header FROM sensors WHERE status = 'Enabled' AND name LIKE ? AND password LIKE ? LIMIT 0 , 1
2018-11-15T07:34:53.370923Z 2 Execute SELECT sensor_id, name, IP, client_ip_via, client_ip_header FROM sensors WHERE status = 'Enabled' AND name LIKE 'codilime' AND password LIKE 'BasicPassword' LIMIT 0 , 1
2018-11-15T07:34:53.371305Z 2 Close stmt
2018-11-15T07:34:53.373867Z 2 Prepare SELECT `tag_id`, `tag_name` FROM `tags`
SELECT `tag_id`, `tag_name` FROM `tags_custom`
2018-11-15T07:34:53.373967Z 2 Execute SELECT `tag_id`, `tag_name` FROM `tags`
SELECT `tag_id`, `tag_name` FROM `tags_custom`
2018-11-15T07:34:53.376797Z 2 Close stmt
2018-11-15T07:34:53.377350Z 2 Close stmt
2018-11-15T07:34:53.377417Z 2 Quit
2018-11-15T07:34:53.391273Z 3 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.391802Z 3 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.391883Z 3 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.395443Z 3 Close stmt
2018-11-15T07:34:53.395659Z 3 Quit
2018-11-15T07:34:53.457246Z 4 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.457803Z 4 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.457902Z 4 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.458897Z 4 Close stmt
2018-11-15T07:34:53.458960Z 4 Quit
2018-11-15T07:34:53.459190Z 5 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.459514Z 5 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.459579Z 5 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.460302Z 5 Close stmt
2018-11-15T07:34:53.460359Z 5 Quit
2018-11-15T07:34:53.464323Z 6 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.464730Z 6 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.464818Z 6 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.465528Z 6 Close stmt
2018-11-15T07:34:53.465581Z 6 Quit
2018-11-15T07:34:53.466299Z 7 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.466600Z 8 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.466607Z 7 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.466829Z 7 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.467134Z 9 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.467461Z 9 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.467549Z 9 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.468313Z 9 Close stmt
2018-11-15T07:34:53.468387Z 9 Quit
2018-11-15T07:34:53.470260Z 7 Close stmt
2018-11-15T07:34:53.470405Z 8 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.470459Z 7 Quit
2018-11-15T07:34:53.470616Z 10 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.470879Z 8 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.471205Z 10 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.471270Z 10 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.471817Z 8 Close stmt
2018-11-15T07:34:53.471963Z 8 Quit
2018-11-15T07:34:53.472039Z 10 Close stmt
2018-11-15T07:34:53.472145Z 10 Quit
2018-11-15T07:34:53.692145Z 11 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.692505Z 11 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.692577Z 11 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.693271Z 11 Close stmt
2018-11-15T07:34:53.693332Z 11 Quit
2018-11-15T07:34:53.700506Z 12 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.700956Z 12 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.701116Z 12 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.702006Z 12 Close stmt
2018-11-15T07:34:53.702045Z 12 Quit
2018-11-15T07:34:53.773901Z 13 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.774426Z 14 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.774716Z 13 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.774796Z 13 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.774995Z 15 Connect waf@localhost on waf using Socket
2018-11-15T07:34:53.775300Z 15 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.775452Z 15 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.776101Z 15 Close stmt
2018-11-15T07:34:53.776153Z 15 Quit
2018-11-15T07:34:53.776643Z 14 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.776779Z 14 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:53.777016Z 13 Close stmt
2018-11-15T07:34:53.777593Z 14 Close stmt
2018-11-15T07:34:53.777965Z 13 Quit
2018-11-15T07:34:53.778161Z 14 Quit
2018-11-15T07:34:54.013617Z 16 Connect waf@localhost on waf using Socket
2018-11-15T07:34:54.014143Z 16 Prepare SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:54.014313Z 16 Execute SELECT `waffle_version` FROM `version` LIMIT 1
2018-11-15T07:34:54.015245Z 16 Close stmt
2018-11-15T07:34:54.015282Z 16 Quit