fastq_mergepairs: multiple potential alignments report

[Érico Polo]

Hi! I'd like to know if there's a way to know which sequences were discarded specifically because of "multiple potential alignments", so I can check on them one by one. Thanks!!

Érico.

[Torbjørn Rognes]

Hi

Thanks for the feedback.

There is no way to get this information today, but I have added an issue on Github to add this as a new feature:

https://github.com/torognes/vsearch/issues/524

I'll try to implement this as soon as I can find time.

- Torbjørn