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VSCSE Petascale Programming 2010

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Scott A. Lathrop2

4/19/11

Second EU-US HPC Summer School - call for applications

The application deadline is April 25. There are still some openings available. As a reminder, travel,

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Second EU-US HPC Summer School - call for applications

The application deadline is April 25. There are still some openings available. As a reminder, travel,

4/19/11

Scott A. Lathrop

3/22/11

2011 OSG Summer School

Hello! We invite you and your colleagues to apply now for the 2011 OSG Summer School, where you can

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2011 OSG Summer School

Hello! We invite you and your colleagues to apply now for the 2011 OSG Summer School, where you can

3/22/11

Scott A. Lathrop

3/22/11

Eclipse User Group

The next monthly Eclipse PTP User Group call will be this coming Wednesday, March 23rd , at 1PM CDT/

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Eclipse User Group

The next monthly Eclipse PTP User Group call will be this coming Wednesday, March 23rd , at 1PM CDT/

3/22/11

Scott A. Lathrop

1/25/11

First Eclipse Parallel Tools User Group Call

Have you been used to using integrated development environments (IDEs) such as Visual Studio or

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First Eclipse Parallel Tools User Group Call

Have you been used to using integrated development environments (IDEs) such as Visual Studio or

1/25/11

Scott A. Lathrop

10/1/10

NSF graduate fellowship funding opportunity

THIS IS VERY IMPORTANT UPDATED NEWS ON NSF GRADUATE FELLOWSHIPS. Dear NSF PIs and Reviewers, As you

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NSF graduate fellowship funding opportunity

THIS IS VERY IMPORTANT UPDATED NEWS ON NSF GRADUATE FELLOWSHIPS. Dear NSF PIs and Reviewers, As you

10/1/10

Scott A. Lathrop

8/24/10

DEISA-TeraGrid Summer School in Italy in October

HPC Challenges in Computational Sciences – Summer School sponsored by DEISA and TeraGrid The European

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DEISA-TeraGrid Summer School in Italy in October

HPC Challenges in Computational Sciences – Summer School sponsored by DEISA and TeraGrid The European

8/24/10

8/9/10

View this page "Teaching Assistants"

Recognized the contributions of the TAs. Click on http://groups.google.com/group/vscse-petascale-

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View this page "Teaching Assistants"

Recognized the contributions of the TAs. Click on http://groups.google.com/group/vscse-petascale-

8/9/10

8/9/10

View this page "Participating Sites"

Linked to photos at UCLA. Click on http://groups.google.com/group/vscse-petascale-programming-2010/

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View this page "Participating Sites"

Linked to photos at UCLA. Click on http://groups.google.com/group/vscse-petascale-programming-2010/

8/9/10

Tom Scavo, Dean Nobles4

7/13/10

View this page "Welcome"

No problem; and thanks, by the way. That equipment worked out very well for us. --dean On Tue, Jul 13

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View this page "Welcome"

No problem; and thanks, by the way. That equipment worked out very well for us. --dean On Tue, Jul 13

7/13/10

ardavan, … Galen (CU.HPC)5

7/9/10

Kraken accounts disabled?

Hi Jim, I can describe my own experience as an example: I activated my OTP key on Tuesday, then used

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Kraken accounts disabled?

Hi Jim, I can describe my own experience as an example: I activated my OTP key on Tuesday, then used

7/9/10

Damien, … Yaakoub El Khamra9

7/9/10

visit issue: gpu doesn't support 3d texturing

FYI if you are doing remote desktop, you want to check this out: http://www.virtualdub.org/blog/pivot

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visit issue: gpu doesn't support 3d texturing

FYI if you are doing remote desktop, you want to check this out: http://www.virtualdub.org/blog/pivot

7/9/10

7/9/10

VisIt: command problem

Could be a firewall issue. -Sean On Jul 9, 4:32 pm, Shin01 <shinwa...@gmail.com> wrote: > I

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VisIt: command problem

Could be a firewall issue. -Sean On Jul 9, 4:32 pm, Shin01 <shinwa...@gmail.com> wrote: > I

7/9/10

7/9/10

VisIt Installation Problem

FYI: my error meant that I downloaded the 64-bit version, instead of 32. --Irina On Fri, Jul 9, 2010

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VisIt Installation Problem

FYI: my error meant that I downloaded the 64-bit version, instead of 32. --Irina On Fri, Jul 9, 2010

7/9/10

monir, … Galen (CU.HPC)3

7/9/10

More details on Visit initial error

We had some similar trouble with Visit. The mdserver initialization failed because the Windows

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More details on Visit initial error

We had some similar trouble with Visit. The mdserver initialization failed because the Windows

7/9/10

7/9/10

VisIT: Depth trick for ssh visualization

Yes, that will work. However, you should be aware that this will also invert your volumes. So if you

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VisIT: Depth trick for ssh visualization

Yes, that will work. However, you should be aware that this will also invert your volumes. So if you

7/9/10

ffoe...@gmail.com

7/9/10

MD boundary conditions issue

I know that VMD will do what you want. If your MD data is in a PDB format (not XYZ), you can both

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MD boundary conditions issue

I know that VMD will do what you want. If your MD data is in a PDB format (not XYZ), you can both

7/9/10

7/9/10

Drop.io mirror for vis files

The vis files I was able to grab are online at http://drop.io/eetrrro . I saved a copy of the session

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Drop.io mirror for vis files

The vis files I was able to grab are online at http://drop.io/eetrrro . I saved a copy of the session

7/9/10

7/9/10

Sample VisIt datasets

If you have not been able to access the datasets, you can download them here: http://www.ornl.gov/

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Sample VisIt datasets

If you have not been able to access the datasets, you can download them here: http://www.ornl.gov/

7/9/10

Scott A. Lathrop, … Tom Scavo3

7/9/10

Sean's slides...

On Fri, Jul 9, 2010 at 12:43 PM, Prakashan Korambath <kora...@gmail.com> wrote: > what is

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Sean's slides...

On Fri, Jul 9, 2010 at 12:43 PM, Prakashan Korambath <kora...@gmail.com> wrote: > what is

7/9/10

7/9/10

Discussion on overview-and-introduction-to-scientific-visualization

The PDF on the page appears with a half white background making the text unreadable to my version of

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Discussion on overview-and-introduction-to-scientific-visualization

The PDF on the page appears with a half white background making the text unreadable to my version of

7/9/10

7/9/10

TotalView CLI information

I know this is kind of late, but for those of you who are interested, here's a quick tutorial

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TotalView CLI information

I know this is kind of late, but for those of you who are interested, here's a quick tutorial

7/9/10

Ethan Brown, … Jeremy Roberts9

7/9/10

Yeah, I should have mentioned I am on 32-bit, and hence my linux-intel directory. On Fri, Jul 9, 2010

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Yeah, I should have mentioned I am on 32-bit, and hence my linux-intel directory. On Fri, Jul 9, 2010

7/9/10

George Otto, … Dean Nobles9

7/9/10

The other day when there was an issue on that server, I was fooled by the fact that my jabber client

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The other day when there was an issue on that server, I was fooled by the fact that my jabber client

7/9/10

Tom Roche, … Prakashan Korambath8

7/9/10

eclipse PTP: bigred: how to set debugger?

Hi Jay, We are running SGE (I suppose Oracle wants to call it OGE now) scheduler on our cluster. I

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eclipse PTP: bigred: how to set debugger?

Hi Jay, We are running SGE (I suppose Oracle wants to call it OGE now) scheduler on our cluster. I

7/9/10

Prakashan Korambath, … Sean Ahern3

7/9/10

visit installation question on MAC 10.6 x86_64

Sorry for the lack of info. These questions have to do with remote access, something that we will not

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visit installation question on MAC 10.6 x86_64

Sorry for the lack of info. These questions have to do with remote access, something that we will not

7/9/10

7/9/10

Improving NAMD scaling on Ranger

Here are the environment variables that improve scaling of NAMD on Ranger by 15-30%. This only works

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Improving NAMD scaling on Ranger

Here are the environment variables that improve scaling of NAMD on Ranger by 15-30%. This only works

7/9/10

Prakashan Korambath, … kirsten5

7/9/10

Sophos antivirus is having some issues with Visit 2.0.1 on Windows 7 x86_64

Well, paraview is ok. Visit I left it with no configuration and let it complete like that. Prakashan

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Sophos antivirus is having some issues with Visit 2.0.1 on Windows 7 x86_64

Well, paraview is ok. Visit I left it with no configuration and let it complete like that. Prakashan

7/9/10

Prakashan Korambath, Yaakoub El Khamra17

7/8/10

paraview run time error on Linux x86_64 (hard coded path)

Glad it worked out :) On Jul 8, 2010 9:37 PM, "Prakashan Korambath" <kora...@gmail.com

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paraview run time error on Linux x86_64 (hard coded path)

Glad it worked out :) On Jul 8, 2010 9:37 PM, "Prakashan Korambath" <kora...@gmail.com

7/8/10

Shin01, Kent Milfeld4

7/8/10

TAU - comparison window

Hi, I believe that you have to click on the Experiment Subdirectory-- right above the green balls in

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TAU - comparison window

Hi, I believe that you have to click on the Experiment Subdirectory-- right above the green balls in

7/8/10

monir, Daniel Lucio2

7/8/10

Trying to run unres on Kraken: "request exceeds max nodes, alloc"

Hi Monir, this file is a job script that should be submitted with the 'qsub command as $ qsub

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Trying to run unres on Kraken: "request exceeds max nodes, alloc"

Hi Monir, this file is a job script that should be submitted with the 'qsub command as $ qsub

7/8/10

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