Initila CG force field

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Najib Al-Shaibani

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Nov 20, 2024, 6:33:47 PMNov 20
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Hi Christoph Junghans, 

I would like to ask how I can generate an initial CG force field after mapping. I saw an example in VOTCA that showed how to generate a force field like that. Could you guide me on how to proceed? 

Thank you.

Christoph Junghans

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Nov 21, 2024, 8:53:59 AMNov 21
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On Wed, Nov 20, 2024 at 4:33 PM Najib Al-Shaibani <nagee...@gmail.com> wrote:
>
> Hi Christoph Junghans,
>
> I would like to ask how I can generate an initial CG force field after mapping. I saw an example in VOTCA that showed how to generate a force field like that. Could you guide me on how to proceed?

Usually the PMF is used as the initial force field for which you have
a couple of options:
1.) Create it by hand
2.) Use csg_boltzmann to create it.
3.) have csg_inverse create it for you from the distributions.

Christoph

>
> Thank you.
>
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Christoph Junghans
Web: http://www.compphys.de
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