Thanks Finn,
I got success with the fatjar! Since it does have a main start point the Procrun Daemon worked well with it, so I can have my server up as a windows service which is very cool.
Here is the .bat file if anyone is interested:
prunsrv.exe //IS/VertxMod ^
--DisplayName="Vertx Manager Server" ^
--Description="Starts and manages the manager webserver." ^
--LogLevel=Debug ^
--LogPath=%CD% ^
--Classpath=%CD%\mod-web-server-2.0.0-final-fat.jar ^
--StartMode=java ^
--StartClass=org.vertx.java.platform.impl.FatJarStarter ^
--Startup=auto ^
--StdOutput=auto ^
--StdError=auto ^
--StopMode=jvm ^
--StopClass=io.vertx.mod.StopWebServerService ^
--StopMethod=stop
goto End